Zm00001e007228_P002

Description : transcription factor (DOF)

Gene families : OG0000060 (Archaeplastida) Phylogenetic Tree(s): OG0000060_tree ,
OG_05_0000025 (LandPlants) Phylogenetic Tree(s): OG_05_0000025_tree ,
OG_06_0012335 (SeedPlants) Phylogenetic Tree(s): OG_06_0012335_tree

Sequence : coding (download), protein (download)

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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.

Type	Description	Actions
Neighborhood	HRR: Zm00001e007228_P002
Cluster	HCCA: Cluster_254

Target	Alias	Description	ECC score	Gene Family Method
AMTR_s00010p00264070	evm_27.TU.AmTr_v1...	RNA biosynthesis.transcriptional activation.C2C2...	0.02	Archaeplastida
AMTR_s00012p00176640	evm_27.TU.AmTr_v1...	RNA biosynthesis.transcriptional activation.C2C2...	0.03	Archaeplastida
AMTR_s00033p00212490	evm_27.TU.AmTr_v1...	RNA biosynthesis.transcriptional activation.C2C2...	0.03	Archaeplastida
AMTR_s00058p00210070	evm_27.TU.AmTr_v1...	RNA biosynthesis.transcriptional activation.C2C2...	0.04	Archaeplastida
AMTR_s00059p00213350	evm_27.TU.AmTr_v1...	RNA biosynthesis.transcriptional activation.C2C2...	0.04	Archaeplastida
AMTR_s00069p00049300	evm_27.TU.AmTr_v1...	RNA biosynthesis.transcriptional activation.C2C2...	0.04	Archaeplastida
AMTR_s00080p00087770	evm_27.TU.AmTr_v1...	RNA biosynthesis.transcriptional activation.C2C2...	0.02	Archaeplastida
AMTR_s00119p00099150	evm_27.TU.AmTr_v1...	RNA biosynthesis.transcriptional activation.C2C2...	0.03	Archaeplastida
AMTR_s00160p00038440	evm_27.TU.AmTr_v1...	RNA biosynthesis.transcriptional activation.C2C2...	0.03	Archaeplastida
AMTR_s00160p00046100	evm_27.TU.AmTr_v1...	RNA biosynthesis.transcriptional activation.C2C2...	0.03	Archaeplastida
AMTR_s00169p00055880	evm_27.TU.AmTr_v1...	RNA biosynthesis.transcriptional activation.C2C2...	0.04	Archaeplastida
AT1G21340	No alias	Dof-type zinc finger DNA-binding family protein	0.03	Archaeplastida
AT1G28310	No alias	Dof-type zinc finger DNA-binding family protein	0.04	Archaeplastida
AT2G28810	No alias	Dof-type zinc finger DNA-binding family protein	0.03	Archaeplastida
AT2G34140	No alias	Dof-type zinc finger DNA-binding family protein	0.02	Archaeplastida
AT2G37590	DOF2.4, ATDOF2.4	DNA binding with one finger 2.4	0.06	Archaeplastida
AT2G46590	DAG2	Dof-type zinc finger DNA-binding family protein	0.04	Archaeplastida
AT3G21270	ADOF2, DOF2	DOF zinc finger protein 2	0.02	Archaeplastida
AT3G61850	DAG1	Dof-type zinc finger DNA-binding family protein	0.05	Archaeplastida
AT4G24060	No alias	Dof-type zinc finger DNA-binding family protein	0.03	Archaeplastida
AT5G60200	TMO6	TARGET OF MONOPTEROS 6	0.03	Archaeplastida
AT5G60850	OBP4	OBF binding protein 4	0.02	Archaeplastida
GSVIVT01005057001	No alias	RNA biosynthesis.transcriptional activation.C2C2...	0.05	Archaeplastida
GSVIVT01007758001	No alias	RNA biosynthesis.transcriptional activation.C2C2...	0.05	Archaeplastida
GSVIVT01007992001	No alias	RNA biosynthesis.transcriptional activation.C2C2...	0.03	Archaeplastida
GSVIVT01016538001	No alias	RNA biosynthesis.transcriptional activation.C2C2...	0.06	Archaeplastida
GSVIVT01019619001	No alias	RNA biosynthesis.transcriptional activation.C2C2...	0.04	Archaeplastida
GSVIVT01025119001	No alias	RNA biosynthesis.transcriptional activation.C2C2...	0.06	Archaeplastida
Gb_07177	No alias	transcription factor (DOF)	0.05	Archaeplastida
Gb_12877	No alias	transcription factor (DOF)	0.02	Archaeplastida
Gb_20130	No alias	transcription factor (DOF)	0.02	Archaeplastida
Gb_20144	No alias	transcription factor (DOF)	0.03	Archaeplastida
Gb_28499	No alias	transcription factor (DOF)	0.06	Archaeplastida
LOC_Os01g09720.1	No alias	transcription factor (DOF)	0.03	Archaeplastida
LOC_Os01g48290.1	No alias	transcription factor (DOF)	0.04	Archaeplastida
LOC_Os02g15350.1	No alias	transcription factor (DOF)	0.02	Archaeplastida
LOC_Os02g45200.1	No alias	transcription factor (DOF)	0.04	Archaeplastida
LOC_Os02g47810.1	No alias	transcription factor (DOF)	0.05	Archaeplastida
LOC_Os03g07360.1	No alias	transcription factor (DOF)	0.03	Archaeplastida
LOC_Os03g16850.1	No alias	transcription factor (DOF)	0.07	Archaeplastida
LOC_Os03g55610.1	No alias	transcription factor (DOF)	0.08	Archaeplastida
LOC_Os03g60630.1	No alias	transcription factor (DOF)	0.05	Archaeplastida
LOC_Os04g47990.1	No alias	transcription factor (DOF)	0.08	Archaeplastida
LOC_Os04g58190.1	No alias	transcription factor (DOF)	0.03	Archaeplastida
LOC_Os05g02150.1	No alias	transcription factor (DOF)	0.1	Archaeplastida
LOC_Os07g32510.1	No alias	transcription factor (DOF)	0.07	Archaeplastida
LOC_Os12g38200.1	No alias	transcription factor (DOF)	0.09	Archaeplastida
MA_52474g0010	No alias	no hits & (original description: none)	0.03	Archaeplastida
MA_56828g0010	No alias	transcription factor (DOF)	0.02	Archaeplastida
MA_939289g0010	No alias	transcription factor (DOF)	0.04	Archaeplastida
Mp2g20790.1	No alias	transcription factor (DOF)	0.02	Archaeplastida
Pp3c26_1490V3.1	No alias	cycling DOF factor 2	0.02	Archaeplastida
Pp3c3_950V3.1	No alias	cycling DOF factor 3	0.02	Archaeplastida
Pp3c9_4910V3.1	No alias	cycling DOF factor 2	0.02	Archaeplastida
Solyc02g076850.2.1	No alias	transcription factor (DOF)	0.04	Archaeplastida
Solyc02g077950.3.1	No alias	transcription factor (DOF)	0.09	Archaeplastida
Solyc02g077960.3.1	No alias	transcription factor (DOF)	0.05	Archaeplastida
Solyc02g078620.1.1	No alias	transcription factor (DOF)	0.03	Archaeplastida
Solyc02g090220.3.1	No alias	transcription factor (DOF)	0.03	Archaeplastida
Solyc02g090310.1.1	No alias	transcription factor (DOF)	0.02	Archaeplastida
Solyc03g082840.3.1	No alias	transcription factor (DOF)	0.03	Archaeplastida
Solyc03g112930.3.1	No alias	transcription factor (DOF)	0.04	Archaeplastida
Solyc04g070960.3.1	No alias	transcription factor (DOF)	0.05	Archaeplastida
Solyc06g062520.1.1	No alias	transcription factor (DOF)	0.04	Archaeplastida
Solyc06g071480.3.1	No alias	transcription factor (DOF)	0.02	Archaeplastida
Solyc06g075370.3.1	No alias	transcription factor (DOF)	0.02	Archaeplastida
Solyc06g076030.3.1	No alias	transcription factor (DOF)	0.05	Archaeplastida
Solyc08g082910.2.1	No alias	transcription factor (DOF)	0.02	Archaeplastida
Solyc10g009360.4.1	No alias	transcription factor (DOF)	0.06	Archaeplastida
Solyc10g086440.2.1	No alias	transcription factor (DOF)	0.03	Archaeplastida
Solyc11g066050.1.1	No alias	transcription factor (DOF)	0.03	Archaeplastida
Solyc11g072500.2.1	No alias	transcription factor (DOF)	0.03	Archaeplastida
Zm00001e005785_P001	No alias	transcription factor (DOF)	0.03	Archaeplastida
Zm00001e006190_P001	No alias	transcription factor (DOF)	0.04	Archaeplastida
Zm00001e015701_P001	No alias	transcription factor (DOF)	0.04	Archaeplastida
Zm00001e023218_P004	No alias	transcription factor (DOF)	0.06	Archaeplastida

Type	GO Term	Name	Evidence	Source
MF	GO:0003674	molecular_function	None	Extended
MF	GO:0003676	nucleic acid binding	None	Extended
MF	GO:0003677	DNA binding	IEA	Interproscan
MF	GO:0005488	binding	None	Extended
BP	GO:0006355	regulation of transcription, DNA-templated	IEA	Interproscan
BP	GO:0008150	biological_process	None	Extended
BP	GO:0009889	regulation of biosynthetic process	None	Extended
BP	GO:0010468	regulation of gene expression	None	Extended
BP	GO:0010556	regulation of macromolecule biosynthetic process	None	Extended
BP	GO:0019219	regulation of nucleobase-containing compound metabolic process	None	Extended
BP	GO:0019222	regulation of metabolic process	None	Extended
BP	GO:0031323	regulation of cellular metabolic process	None	Extended
BP	GO:0031326	regulation of cellular biosynthetic process	None	Extended
BP	GO:0050789	regulation of biological process	None	Extended
BP	GO:0050794	regulation of cellular process	None	Extended
BP	GO:0051171	regulation of nitrogen compound metabolic process	None	Extended
BP	GO:0051252	regulation of RNA metabolic process	None	Extended
BP	GO:0060255	regulation of macromolecule metabolic process	None	Extended
BP	GO:0065007	biological regulation	None	Extended
BP	GO:0080090	regulation of primary metabolic process	None	Extended
MF	GO:0097159	organic cyclic compound binding	None	Extended
MF	GO:1901363	heterocyclic compound binding	None	Extended
BP	GO:1903506	regulation of nucleic acid-templated transcription	None	Extended
BP	GO:2000112	regulation of cellular macromolecule biosynthetic process	None	Extended
BP	GO:2001141	regulation of RNA biosynthetic process	None	Extended

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Type	GO Term	Name	Evidence	Source
MF	GO:0000166	nucleotide binding	IEP	Neighborhood
MF	GO:0003700	DNA-binding transcription factor activity	IEP	Neighborhood
MF	GO:0004672	protein kinase activity	IEP	Neighborhood
MF	GO:0005524	ATP binding	IEP	Neighborhood
CC	GO:0005634	nucleus	IEP	Neighborhood
BP	GO:0006464	cellular protein modification process	IEP	Neighborhood
BP	GO:0006468	protein phosphorylation	IEP	Neighborhood
BP	GO:0006793	phosphorus metabolic process	IEP	Neighborhood
BP	GO:0006796	phosphate-containing compound metabolic process	IEP	Neighborhood
MF	GO:0008144	drug binding	IEP	Neighborhood
MF	GO:0016301	kinase activity	IEP	Neighborhood
BP	GO:0016310	phosphorylation	IEP	Neighborhood
MF	GO:0016740	transferase activity	IEP	Neighborhood
MF	GO:0016772	transferase activity, transferring phosphorus-containing groups	IEP	Neighborhood
MF	GO:0016773	phosphotransferase activity, alcohol group as acceptor	IEP	Neighborhood
MF	GO:0016887	ATPase activity	IEP	Neighborhood
MF	GO:0017076	purine nucleotide binding	IEP	Neighborhood
MF	GO:0030554	adenyl nucleotide binding	IEP	Neighborhood
MF	GO:0032553	ribonucleotide binding	IEP	Neighborhood
MF	GO:0032555	purine ribonucleotide binding	IEP	Neighborhood
MF	GO:0032559	adenyl ribonucleotide binding	IEP	Neighborhood
MF	GO:0035639	purine ribonucleoside triphosphate binding	IEP	Neighborhood
MF	GO:0036094	small molecule binding	IEP	Neighborhood
BP	GO:0036211	protein modification process	IEP	Neighborhood
MF	GO:0043168	anion binding	IEP	Neighborhood
BP	GO:0043412	macromolecule modification	IEP	Neighborhood
BP	GO:0044267	cellular protein metabolic process	IEP	Neighborhood
MF	GO:0097367	carbohydrate derivative binding	IEP	Neighborhood
MF	GO:0140096	catalytic activity, acting on a protein	IEP	Neighborhood
MF	GO:0140110	transcription regulator activity	IEP	Neighborhood
MF	GO:1901265	nucleoside phosphate binding	IEP	Neighborhood

InterPro domains	Description	Start	Stop
IPR003851	Znf_Dof	94	150

External Links

No external refs found!

Zm00001e007228_P002

Expression Profile

Co-expression Networks

Expression Context Conservation (ECC)

Functional Annotation