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  5. AT3G13400

AT3G13400 (sks13)


Aliases : sks13

Description : SKU5 similar 13


Gene families : OG0000677 (Archaeplastida) Phylogenetic Tree(s): OG0000677_tree ,
OG_05_0000383 (LandPlants) Phylogenetic Tree(s): OG_05_0000383_tree ,
OG_06_0003619 (SeedPlants) Phylogenetic Tree(s): OG_06_0003619_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: AT3G13400
Cluster HCCA: Cluster_155

Target Alias Description ECC score Gene Family Method Actions
AMTR_s00037p00216460 evm_27.TU.AmTr_v1... Enzyme classification.EC_1 oxidoreductases.EC_1.10... 0.03 Archaeplastida
AMTR_s00106p00093220 evm_27.TU.AmTr_v1... Enzyme classification.EC_1 oxidoreductases.EC_1.10... 0.15 Archaeplastida
AMTR_s00159p00040990 evm_27.TU.AmTr_v1... Enzyme classification.EC_1 oxidoreductases.EC_1.10... 0.11 Archaeplastida
AT1G55570 sks12 SKU5 similar 12 0.06 Archaeplastida
AT1G76160 sks5 SKU5 similar 5 0.07 Archaeplastida
GSVIVT01012709001 No alias L-ascorbate oxidase homolog OS=Brassica napus 0.02 Archaeplastida
Gb_17061 No alias L-ascorbate oxidase homolog OS=Brassica napus... 0.04 Archaeplastida
Gb_29247 No alias L-ascorbate oxidase homolog OS=Brassica napus... 0.03 Archaeplastida
LOC_Os01g60080.1 No alias L-ascorbate oxidase homolog OS=Brassica napus... 0.08 Archaeplastida
LOC_Os05g40740.3 No alias L-ascorbate oxidase homolog OS=Brassica napus... 0.12 Archaeplastida
MA_10236360g0010 No alias L-ascorbate oxidase homolog OS=Brassica napus... 0.04 Archaeplastida
MA_10427393g0010 No alias L-ascorbate oxidase homolog OS=Brassica napus... 0.04 Archaeplastida
Smo410532 No alias Monocopper oxidase-like protein SKU5 OS=Arabidopsis thaliana 0.03 Archaeplastida
Solyc01g005510.3.1 No alias L-ascorbate oxidase homolog OS=Nicotiana tabacum... 0.1 Archaeplastida
Solyc01g056310.3.1 No alias L-ascorbate oxidase homolog OS=Nicotiana tabacum... 0.11 Archaeplastida
Solyc02g065170.3.1 No alias L-ascorbate oxidase homolog OS=Nicotiana tabacum... 0.04 Archaeplastida
Solyc03g063150.3.1 No alias L-ascorbate oxidase homolog OS=Nicotiana tabacum... 0.05 Archaeplastida
Solyc04g081520.3.1 No alias Monocopper oxidase-like protein SKS1 OS=Arabidopsis... 0.03 Archaeplastida
Solyc07g052230.3.1 No alias L-ascorbate oxidase homolog OS=Nicotiana tabacum... 0.03 Archaeplastida
Solyc11g008860.3.1 No alias no hits & (original description: none) 0.08 Archaeplastida
Solyc12g094460.2.1 No alias L-ascorbate oxidase homolog OS=Brassica napus... 0.03 Archaeplastida
Zm00001e012961_P001 No alias L-ascorbate oxidase homolog OS=Nicotiana tabacum... 0.04 Archaeplastida
Zm00001e019468_P001 No alias L-ascorbate oxidase homolog OS=Brassica napus... 0.09 Archaeplastida
Zm00001e027313_P002 No alias L-ascorbate oxidase homolog OS=Nicotiana tabacum... 0.11 Archaeplastida
Zm00001e028870_P001 No alias L-ascorbate oxidase homolog OS=Brassica napus... 0.08 Archaeplastida
Zm00001e031971_P001 No alias L-ascorbate oxidase homolog OS=Nicotiana tabacum... 0.11 Archaeplastida

Type GO Term Name Evidence Source
CC GO:0005576 extracellular region ISM Interproscan
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Type GO Term Name Evidence Source
BP GO:0000902 cell morphogenesis IEP Neighborhood
BP GO:0000904 cell morphogenesis involved in differentiation IEP Neighborhood
BP GO:0001558 regulation of cell growth IEP Neighborhood
BP GO:0003006 developmental process involved in reproduction IEP Neighborhood
MF GO:0003824 catalytic activity IEP Neighborhood
MF GO:0004553 hydrolase activity, hydrolyzing O-glycosyl compounds IEP Neighborhood
MF GO:0004565 beta-galactosidase activity IEP Neighborhood
MF GO:0004650 polygalacturonase activity IEP Neighborhood
MF GO:0004672 protein kinase activity IEP Neighborhood
MF GO:0004674 protein serine/threonine kinase activity IEP Neighborhood
MF GO:0004683 calmodulin-dependent protein kinase activity IEP Neighborhood
MF GO:0004857 enzyme inhibitor activity IEP Neighborhood
MF GO:0004871 obsolete signal transducer activity IEP Neighborhood
MF GO:0005319 lipid transporter activity IEP Neighborhood
MF GO:0005548 phospholipid transporter activity IEP Neighborhood
CC GO:0005618 cell wall IEP Neighborhood
CC GO:0005886 plasma membrane IEP Neighborhood
BP GO:0006928 movement of cell or subcellular component IEP Neighborhood
BP GO:0007267 cell-cell signaling IEP Neighborhood
MF GO:0008526 phosphatidylinositol transporter activity IEP Neighborhood
MF GO:0009044 xylan 1,4-beta-xylosidase activity IEP Neighborhood
CC GO:0009505 plant-type cell wall IEP Neighborhood
BP GO:0009653 anatomical structure morphogenesis IEP Neighborhood
BP GO:0009664 plant-type cell wall organization IEP Neighborhood
BP GO:0009826 unidimensional cell growth IEP Neighborhood
BP GO:0009827 plant-type cell wall modification IEP Neighborhood
BP GO:0009860 pollen tube growth IEP Neighborhood
BP GO:0009932 cell tip growth IEP Neighborhood
BP GO:0010769 regulation of cell morphogenesis involved in differentiation IEP Neighborhood
MF GO:0015925 galactosidase activity IEP Neighborhood
CC GO:0016020 membrane IEP Neighborhood
BP GO:0016043 cellular component organization IEP Neighborhood
BP GO:0016049 cell growth IEP Neighborhood
MF GO:0016209 antioxidant activity IEP Neighborhood
MF GO:0016301 kinase activity IEP Neighborhood
MF GO:0016307 phosphatidylinositol phosphate kinase activity IEP Neighborhood
MF GO:0016308 1-phosphatidylinositol-4-phosphate 5-kinase activity IEP Neighborhood
CC GO:0016324 apical plasma membrane IEP Neighborhood
MF GO:0016772 transferase activity, transferring phosphorus-containing groups IEP Neighborhood
MF GO:0016773 phosphotransferase activity, alcohol group as acceptor IEP Neighborhood
MF GO:0016787 hydrolase activity IEP Neighborhood
MF GO:0016798 hydrolase activity, acting on glycosyl bonds IEP Neighborhood
MF GO:0016835 carbon-oxygen lyase activity IEP Neighborhood
MF GO:0016837 carbon-oxygen lyase activity, acting on polysaccharides IEP Neighborhood
BP GO:0017157 regulation of exocytosis IEP Neighborhood
BP GO:0022414 reproductive process IEP Neighborhood
BP GO:0022603 regulation of anatomical structure morphogenesis IEP Neighborhood
BP GO:0022604 regulation of cell morphogenesis IEP Neighborhood
BP GO:0023052 signaling IEP Neighborhood
BP GO:0030029 actin filament-based process IEP Neighborhood
BP GO:0030036 actin cytoskeleton organization IEP Neighborhood
BP GO:0030048 actin filament-based movement IEP Neighborhood
MF GO:0030234 enzyme regulator activity IEP Neighborhood
CC GO:0030312 external encapsulating structure IEP Neighborhood
CC GO:0030427 site of polarized growth IEP Neighborhood
MF GO:0030570 pectate lyase activity IEP Neighborhood
MF GO:0030599 pectinesterase activity IEP Neighborhood
BP GO:0030834 regulation of actin filament depolymerization IEP Neighborhood
CC GO:0031224 intrinsic component of membrane IEP Neighborhood
CC GO:0031225 anchored component of membrane IEP Neighborhood
MF GO:0032794 GTPase activating protein binding IEP Neighborhood
BP GO:0032989 cellular component morphogenesis IEP Neighborhood
CC GO:0035838 growing cell tip IEP Neighborhood
BP GO:0040007 growth IEP Neighborhood
BP GO:0040008 regulation of growth IEP Neighborhood
BP GO:0042545 cell wall modification IEP Neighborhood
CC GO:0042995 cell projection IEP Neighborhood
BP GO:0043244 regulation of protein complex disassembly IEP Neighborhood
CC GO:0044425 membrane part IEP Neighborhood
CC GO:0044463 cell projection part IEP Neighborhood
CC GO:0045177 apical part of cell IEP Neighborhood
BP GO:0045229 external encapsulating structure organization IEP Neighborhood
MF GO:0046910 pectinesterase inhibitor activity IEP Neighborhood
BP GO:0048588 developmental cell growth IEP Neighborhood
BP GO:0048589 developmental growth IEP Neighborhood
BP GO:0048638 regulation of developmental growth IEP Neighborhood
BP GO:0048869 cellular developmental process IEP Neighborhood
BP GO:0051046 regulation of secretion IEP Neighborhood
BP GO:0051128 regulation of cellular component organization IEP Neighborhood
CC GO:0051286 cell tip IEP Neighborhood
BP GO:0051510 regulation of unidimensional cell growth IEP Neighborhood
BP GO:0051648 vesicle localization IEP Neighborhood
BP GO:0051650 establishment of vesicle localization IEP Neighborhood
MF GO:0052689 carboxylic ester hydrolase activity IEP Neighborhood
BP GO:0060284 regulation of cell development IEP Neighborhood
BP GO:0060560 developmental growth involved in morphogenesis IEP Neighborhood
BP GO:0060627 regulation of vesicle-mediated transport IEP Neighborhood
BP GO:0071554 cell wall organization or biogenesis IEP Neighborhood
BP GO:0071555 cell wall organization IEP Neighborhood
BP GO:0071669 plant-type cell wall organization or biogenesis IEP Neighborhood
BP GO:0071840 cellular component organization or biogenesis IEP Neighborhood
BP GO:0080092 regulation of pollen tube growth IEP Neighborhood
CC GO:0090404 pollen tube tip IEP Neighborhood
CC GO:0090406 pollen tube IEP Neighborhood
MF GO:0097599 xylanase activity IEP Neighborhood
CC GO:0098590 plasma membrane region IEP Neighborhood
MF GO:0098772 molecular function regulator IEP Neighborhood
CC GO:0120025 plasma membrane bounded cell projection IEP Neighborhood
CC GO:0120038 plasma membrane bounded cell projection part IEP Neighborhood
BP GO:1901879 regulation of protein depolymerization IEP Neighborhood
BP GO:1903530 regulation of secretion by cell IEP Neighborhood
InterPro domains Description Start Stop
IPR001117 Cu-oxidase 159 300
IPR011707 Cu-oxidase_3 33 146
IPR011706 Cu-oxidase_2 382 521
No external refs found!