Zm00001e007309_P001

Description : permease component TGD1 of TGD lipid importer complex

Gene families : OG0007109 (Archaeplastida) Phylogenetic Tree(s): OG0007109_tree ,
OG_05_0008977 (LandPlants) Phylogenetic Tree(s): OG_05_0008977_tree ,
OG_06_0009344 (SeedPlants) Phylogenetic Tree(s): OG_06_0009344_tree

Sequence : coding (download), protein (download)

Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.

Type	Description	Actions
Neighborhood	HRR: Zm00001e007309_P001
Cluster	HCCA: Cluster_178

Target	Alias	Description	ECC score	Gene Family Method	Actions
Solyc01g100250.3.1	No alias	permease component TGD1 of TGD lipid importer complex	0.04	Archaeplastida

Type	GO Term	Name	Evidence	Source
CC	GO:0005575	cellular_component	None	Extended
CC	GO:0032991	protein-containing complex	None	Extended
CC	GO:0043190	ATP-binding cassette (ABC) transporter complex	IEA	Interproscan
CC	GO:0044425	membrane part	None	Extended
CC	GO:0044459	plasma membrane part	None	Extended
CC	GO:0044464	cell part	None	Extended
CC	GO:0098533	ATPase dependent transmembrane transport complex	None	Extended
CC	GO:0098796	membrane protein complex	None	Extended
CC	GO:0098797	plasma membrane protein complex	None	Extended
CC	GO:1902494	catalytic complex	None	Extended
CC	GO:1902495	transmembrane transporter complex	None	Extended
CC	GO:1904949	ATPase complex	None	Extended
CC	GO:1990351	transporter complex	None	Extended

Type	GO Term	Name	Evidence	Source
CC	GO:0000428	DNA-directed RNA polymerase complex	IEP	Neighborhood
MF	GO:0004518	nuclease activity	IEP	Neighborhood
MF	GO:0004519	endonuclease activity	IEP	Neighborhood
CC	GO:0005666	RNA polymerase III complex	IEP	Neighborhood
BP	GO:0006351	transcription, DNA-templated	IEP	Neighborhood
BP	GO:0006383	transcription by RNA polymerase III	IEP	Neighborhood
BP	GO:0006720	isoprenoid metabolic process	IEP	Neighborhood
BP	GO:0008299	isoprenoid biosynthetic process	IEP	Neighborhood
CC	GO:0030880	RNA polymerase complex	IEP	Neighborhood
CC	GO:0055029	nuclear DNA-directed RNA polymerase complex	IEP	Neighborhood
CC	GO:0061695	transferase complex, transferring phosphorus-containing groups	IEP	Neighborhood
BP	GO:0097659	nucleic acid-templated transcription	IEP	Neighborhood
CC	GO:1990234	transferase complex	IEP	Neighborhood

InterPro domains	Description	Start	Stop
IPR030802	Permease_MalE	111	320

External Links

No external refs found!