Zm00001e007381_P001

Description : transcription factor (HD-ZIP I/II)

Gene families : OG0000146 (Archaeplastida) Phylogenetic Tree(s): OG0000146_tree ,
OG_05_0000061 (LandPlants) Phylogenetic Tree(s): OG_05_0000061_tree ,
OG_06_0000101 (SeedPlants) Phylogenetic Tree(s): OG_06_0000101_tree

Sequence : coding (download), protein (download)

Download

Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.

Type	Description	Actions
Neighborhood	HRR: Zm00001e007381_P001
Cluster	HCCA: Cluster_18

Target	Alias	Description	ECC score	Gene Family Method
AMTR_s00078p00085160	evm_27.TU.AmTr_v1...	RNA biosynthesis.transcriptional activation.HB...	0.03	Archaeplastida
AT2G46680	HB-7, ATHB-7, ATHB7	homeobox 7	0.03	Archaeplastida
AT3G61890	HB-12, ATHB-12, ATHB12	homeobox 12	0.1	Archaeplastida
GSVIVT01027407001	No alias	RNA biosynthesis.transcriptional activation.HB...	0.12	Archaeplastida
Gb_35959	No alias	transcription factor (HD-ZIP I/II)	0.04	Archaeplastida
Gb_39722	No alias	transcription factor (HD-ZIP I/II)	0.04	Archaeplastida
LOC_Os02g43330.1	No alias	transcription factor (HD-ZIP I/II)	0.05	Archaeplastida
LOC_Os03g08960.1	No alias	transcription factor (HD-ZIP I/II)	0.02	Archaeplastida
LOC_Os04g45810.1	No alias	transcription factor (HD-ZIP I/II)	0.04	Archaeplastida
LOC_Os09g21180.1	No alias	transcription factor (HD-ZIP I/II)	0.04	Archaeplastida
LOC_Os10g23090.1	No alias	transcription factor (HD-ZIP I/II)	0.02	Archaeplastida
MA_19453g0040	No alias	transcription factor (HD-ZIP I/II)	0.04	Archaeplastida
MA_19453g0050	No alias	Homeobox-leucine zipper protein HAT5 OS=Arabidopsis...	0.05	Archaeplastida
Mp3g02320.1	No alias	transcription factor (HD-ZIP I/II)	0.03	Archaeplastida
Pp3c12_21760V3.1	No alias	homeobox protein 16	0.03	Archaeplastida
Pp3c1_37070V3.1	No alias	homeobox protein 16	0.03	Archaeplastida
Solyc01g096320.3.1	No alias	transcription factor (HD-ZIP I/II)	0.03	Archaeplastida
Solyc02g077590.1.1	No alias	transcription factor (HD-ZIP I/II)	0.06	Archaeplastida
Solyc04g005800.3.1	No alias	transcription factor (HD-ZIP I/II)	0.04	Archaeplastida
Solyc05g006980.3.1	No alias	transcription factor (HD-ZIP I/II)	0.04	Archaeplastida
Solyc05g051460.3.1	No alias	transcription factor (HD-ZIP I/II)	0.03	Archaeplastida
Solyc07g062790.1.1	No alias	transcription factor (HD-ZIP I/II)	0.03	Archaeplastida
Solyc08g083130.4.1	No alias	transcription factor (HD-ZIP I/II)	0.03	Archaeplastida
Zm00001e010218_P001	No alias	transcription factor (HD-ZIP I/II)	0.07	Archaeplastida
Zm00001e034785_P001	No alias	transcription factor (HD-ZIP I/II)	0.07	Archaeplastida

Type	GO Term	Name	Evidence	Source
MF	GO:0003674	molecular_function	None	Extended
MF	GO:0003676	nucleic acid binding	None	Extended
MF	GO:0003677	DNA binding	IEA	Interproscan
MF	GO:0005488	binding	None	Extended
BP	GO:0006355	regulation of transcription, DNA-templated	IEA	Interproscan
BP	GO:0008150	biological_process	None	Extended
BP	GO:0009889	regulation of biosynthetic process	None	Extended
BP	GO:0010468	regulation of gene expression	None	Extended
BP	GO:0010556	regulation of macromolecule biosynthetic process	None	Extended
BP	GO:0019219	regulation of nucleobase-containing compound metabolic process	None	Extended
BP	GO:0019222	regulation of metabolic process	None	Extended
BP	GO:0031323	regulation of cellular metabolic process	None	Extended
BP	GO:0031326	regulation of cellular biosynthetic process	None	Extended
MF	GO:0043565	sequence-specific DNA binding	IEA	Interproscan
BP	GO:0050789	regulation of biological process	None	Extended
BP	GO:0050794	regulation of cellular process	None	Extended
BP	GO:0051171	regulation of nitrogen compound metabolic process	None	Extended
BP	GO:0051252	regulation of RNA metabolic process	None	Extended
BP	GO:0060255	regulation of macromolecule metabolic process	None	Extended
BP	GO:0065007	biological regulation	None	Extended
BP	GO:0080090	regulation of primary metabolic process	None	Extended
MF	GO:0097159	organic cyclic compound binding	None	Extended
MF	GO:1901363	heterocyclic compound binding	None	Extended
BP	GO:1903506	regulation of nucleic acid-templated transcription	None	Extended
BP	GO:2000112	regulation of cellular macromolecule biosynthetic process	None	Extended
BP	GO:2001141	regulation of RNA biosynthetic process	None	Extended

Toggle parental

Type	GO Term	Name	Evidence	Source
MF	GO:0003700	DNA-binding transcription factor activity	IEP	Neighborhood
MF	GO:0003883	CTP synthase activity	IEP	Neighborhood
MF	GO:0004842	ubiquitin-protein transferase activity	IEP	Neighborhood
BP	GO:0006220	pyrimidine nucleotide metabolic process	IEP	Neighborhood
BP	GO:0006221	pyrimidine nucleotide biosynthetic process	IEP	Neighborhood
BP	GO:0009165	nucleotide biosynthetic process	IEP	Neighborhood
BP	GO:0016567	protein ubiquitination	IEP	Neighborhood
MF	GO:0016624	oxidoreductase activity, acting on the aldehyde or oxo group of donors, disulfide as acceptor	IEP	Neighborhood
MF	GO:0016879	ligase activity, forming carbon-nitrogen bonds	IEP	Neighborhood
MF	GO:0016903	oxidoreductase activity, acting on the aldehyde or oxo group of donors	IEP	Neighborhood
MF	GO:0019787	ubiquitin-like protein transferase activity	IEP	Neighborhood
BP	GO:0032446	protein modification by small protein conjugation	IEP	Neighborhood
BP	GO:0072527	pyrimidine-containing compound metabolic process	IEP	Neighborhood
BP	GO:0072528	pyrimidine-containing compound biosynthetic process	IEP	Neighborhood
MF	GO:0140110	transcription regulator activity	IEP	Neighborhood
BP	GO:1901293	nucleoside phosphate biosynthetic process	IEP	Neighborhood

InterPro domains	Description	Start	Stop
IPR003106	Leu_zip_homeo	112	153
IPR001356	Homeobox_dom	56	110

External Links

No external refs found!

Zm00001e007381_P001

Expression Profile

Co-expression Networks

Expression Context Conservation (ECC)

Functional Annotation