AT1G12840 (ATVHA-C, DET3)

Aliases : ATVHA-C, DET3

Description : vacuolar ATP synthase subunit C (VATC) / V-ATPase C subunit / vacuolar proton pump C subunit (DET3)

Gene families : OG0004139 (Archaeplastida) Phylogenetic Tree(s): OG0004139_tree ,
OG_05_0006297 (LandPlants) Phylogenetic Tree(s): OG_05_0006297_tree ,
OG_06_0007525 (SeedPlants) Phylogenetic Tree(s): OG_06_0007525_tree

Sequence : coding (download), protein (download)

Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.

Type Description Actions
Neighborhood HRR: AT1G12840

Target Alias Description ECC score Gene Family Method Actions
Solyc03g097800.4.1 No alias subunit C of V-type ATPase peripheral V1 subcomplex 0.01 Archaeplastida

Type GO Term Name Evidence Source
CC GO:0000221 vacuolar proton-transporting V-type ATPase, V1 domain IDA Interproscan
CC GO:0000325 plant-type vacuole IDA Interproscan
BP GO:0000902 cell morphogenesis RCA Interproscan
CC GO:0005773 vacuole IDA Interproscan
CC GO:0005774 vacuolar membrane IDA Interproscan
CC GO:0005794 Golgi apparatus IDA Interproscan
CC GO:0005886 plasma membrane IDA Interproscan
BP GO:0006007 glucose catabolic process RCA Interproscan
BP GO:0006511 ubiquitin-dependent protein catabolic process RCA Interproscan
BP GO:0006816 calcium ion transport RCA Interproscan
BP GO:0007030 Golgi organization RCA Interproscan
BP GO:0007033 vacuole organization RCA Interproscan
CC GO:0009507 chloroplast IDA Interproscan
BP GO:0009651 response to salt stress RCA Interproscan
BP GO:0009809 lignin biosynthetic process IGI Interproscan
BP GO:0009826 unidimensional cell growth IMP Interproscan
BP GO:0009853 photorespiration RCA Interproscan
BP GO:0009932 cell tip growth RCA Interproscan
BP GO:0016049 cell growth RCA Interproscan
BP GO:0016051 carbohydrate biosynthetic process RCA Interproscan
BP GO:0030243 cellulose metabolic process RCA Interproscan
BP GO:0043255 regulation of carbohydrate biosynthetic process IGI Interproscan
MF GO:0046961 proton-transporting ATPase activity, rotational mechanism IGI Interproscan
BP GO:0048193 Golgi vesicle transport RCA Interproscan
BP GO:0048765 root hair cell differentiation RCA Interproscan
BP GO:0051788 response to misfolded protein RCA Interproscan
BP GO:0080129 proteasome core complex assembly RCA Interproscan
Type GO Term Name Evidence Source
MF GO:0000166 nucleotide binding IEP Neighborhood
MF GO:0001882 nucleoside binding IEP Neighborhood
MF GO:0001883 purine nucleoside binding IEP Neighborhood
MF GO:0005525 GTP binding IEP Neighborhood
CC GO:0005768 endosome IEP Neighborhood
CC GO:0005911 cell-cell junction IEP Neighborhood
CC GO:0009504 cell plate IEP Neighborhood
CC GO:0009506 plasmodesma IEP Neighborhood
MF GO:0017076 purine nucleotide binding IEP Neighborhood
MF GO:0019001 guanyl nucleotide binding IEP Neighborhood
CC GO:0030054 cell junction IEP Neighborhood
CC GO:0031410 cytoplasmic vesicle IEP Neighborhood
CC GO:0031982 vesicle IEP Neighborhood
MF GO:0032549 ribonucleoside binding IEP Neighborhood
MF GO:0032550 purine ribonucleoside binding IEP Neighborhood
MF GO:0032553 ribonucleotide binding IEP Neighborhood
MF GO:0032555 purine ribonucleotide binding IEP Neighborhood
MF GO:0032561 guanyl ribonucleotide binding IEP Neighborhood
MF GO:0035639 purine ribonucleoside triphosphate binding IEP Neighborhood
MF GO:0036094 small molecule binding IEP Neighborhood
MF GO:0043168 anion binding IEP Neighborhood
MF GO:0097367 carbohydrate derivative binding IEP Neighborhood
CC GO:0097708 intracellular vesicle IEP Neighborhood
MF GO:1901265 nucleoside phosphate binding IEP Neighborhood
InterPro domains Description Start Stop
IPR004907 ATPase_V1-cplx_csu 5 368
No external refs found!