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  5. Zm00001e008234_P001

Zm00001e008234_P001


Description : starch branching enzyme


Gene families : OG0001006 (Archaeplastida) Phylogenetic Tree(s): OG0001006_tree ,
OG_05_0002115 (LandPlants) Phylogenetic Tree(s): OG_05_0002115_tree ,
OG_06_0006934 (SeedPlants) Phylogenetic Tree(s): OG_06_0006934_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Zm00001e008234_P001
Cluster HCCA: Cluster_343

Target Alias Description ECC score Gene Family Method Actions
AT2G36390 SBE2.1, BE3 starch branching enzyme 2.1 0.03 Archaeplastida
Cre06.g289850 No alias Carbohydrate metabolism.starch... 0.02 Archaeplastida
Cre10.g444700 No alias Carbohydrate metabolism.starch... 0.02 Archaeplastida
LOC_Os02g32660.1 No alias starch branching enzyme 0.02 Archaeplastida
LOC_Os06g51084.1 No alias starch branching enzyme 0.02 Archaeplastida
MA_10431704g0010 No alias 1,4-alpha-glucan-branching enzyme 2-2,... 0.03 Archaeplastida
Mp7g15230.1 No alias starch branching enzyme 0.05 Archaeplastida
Pp3c5_8810V3.1 No alias starch branching enzyme 2.1 0.02 Archaeplastida
Solyc09g009190.4.1 No alias starch branching enzyme 0.03 Archaeplastida
Zm00001e013321_P002 No alias starch branching enzyme 0.05 Archaeplastida
Zm00001e014711_P001 No alias starch branching enzyme 0.03 Archaeplastida

Type GO Term Name Evidence Source
MF GO:0003824 catalytic activity IEA Interproscan
MF GO:0004553 hydrolase activity, hydrolyzing O-glycosyl compounds IEA Interproscan
BP GO:0005975 carbohydrate metabolic process IEA Interproscan
MF GO:0043169 cation binding IEA Interproscan
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Type GO Term Name Evidence Source
MF GO:0003684 damaged DNA binding IEP Neighborhood
MF GO:0003906 DNA-(apurinic or apyrimidinic site) endonuclease activity IEP Neighborhood
BP GO:0006259 DNA metabolic process IEP Neighborhood
BP GO:0006281 DNA repair IEP Neighborhood
BP GO:0006284 base-excision repair IEP Neighborhood
BP GO:0006289 nucleotide-excision repair IEP Neighborhood
BP GO:0006974 cellular response to DNA damage stimulus IEP Neighborhood
MF GO:0016620 oxidoreductase activity, acting on the aldehyde or oxo group of donors, NAD or NADP as acceptor IEP Neighborhood
MF GO:0016779 nucleotidyltransferase activity IEP Neighborhood
MF GO:0016799 hydrolase activity, hydrolyzing N-glycosyl compounds IEP Neighborhood
MF GO:0016887 ATPase activity IEP Neighborhood
MF GO:0016903 oxidoreductase activity, acting on the aldehyde or oxo group of donors IEP Neighborhood
BP GO:0033554 cellular response to stress IEP Neighborhood
BP GO:0051716 cellular response to stimulus IEP Neighborhood
MF GO:0140097 catalytic activity, acting on DNA IEP Neighborhood
InterPro domains Description Start Stop
IPR006048 A-amylase/branching_C 887 980
IPR006047 Glyco_hydro_13_cat_dom 498 570
IPR004193 Glyco_hydro_13_N 349 432
No external refs found!