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  5. AT3G14550

AT3G14550 (GGPS3)


Aliases : GGPS3

Description : geranylgeranyl pyrophosphate synthase 3


Gene families : OG0000728 (Archaeplastida) Phylogenetic Tree(s): OG0000728_tree ,
OG_05_0001040 (LandPlants) Phylogenetic Tree(s): OG_05_0001040_tree ,
OG_06_0001095 (SeedPlants) Phylogenetic Tree(s): OG_06_0001095_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: AT3G14550
Cluster HCCA: Cluster_154

Target Alias Description ECC score Gene Family Method Actions
AT4G38460 GGR geranylgeranyl reductase 0.04 Archaeplastida
Gb_21550 No alias isoprenyl diphosphate synthase 0.04 Archaeplastida
Gb_33246 No alias isoprenyl diphosphate synthase 0.03 Archaeplastida
Gb_39712 No alias isoprenyl diphosphate synthase 0.02 Archaeplastida
MA_10268065g0010 No alias Geranylgeranyl pyrophosphate synthase, chloroplastic... 0.04 Archaeplastida
MA_218657g0010 No alias isoprenyl diphosphate synthase 0.05 Archaeplastida
MA_543467g0010 No alias isoprenyl diphosphate synthase 0.02 Archaeplastida
MA_888237g0010 No alias isoprenyl diphosphate synthase 0.02 Archaeplastida
Solyc11g011240.1.1 No alias isoprenyl diphosphate synthase 0.03 Archaeplastida

Type GO Term Name Evidence Source
MF GO:0004311 farnesyltranstransferase activity IDA Interproscan
BP GO:0008299 isoprenoid biosynthetic process ISS Interproscan
BP GO:0008299 isoprenoid biosynthetic process TAS Interproscan
CC GO:0009507 chloroplast IDA Interproscan
CC GO:0009513 etioplast IDA Interproscan
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Type GO Term Name Evidence Source
MF GO:0004857 enzyme inhibitor activity IEP Neighborhood
BP GO:0006084 acetyl-CoA metabolic process IEP Neighborhood
BP GO:0006637 acyl-CoA metabolic process IEP Neighborhood
BP GO:0006665 sphingolipid metabolic process IEP Neighborhood
BP GO:0006694 steroid biosynthetic process IEP Neighborhood
BP GO:0008202 steroid metabolic process IEP Neighborhood
BP GO:0016125 sterol metabolic process IEP Neighborhood
BP GO:0016126 sterol biosynthetic process IEP Neighborhood
BP GO:0016128 phytosteroid metabolic process IEP Neighborhood
BP GO:0016129 phytosteroid biosynthetic process IEP Neighborhood
BP GO:0016131 brassinosteroid metabolic process IEP Neighborhood
BP GO:0016132 brassinosteroid biosynthetic process IEP Neighborhood
BP GO:0030148 sphingolipid biosynthetic process IEP Neighborhood
CC GO:0031224 intrinsic component of membrane IEP Neighborhood
BP GO:0033865 nucleoside bisphosphate metabolic process IEP Neighborhood
BP GO:0033875 ribonucleoside bisphosphate metabolic process IEP Neighborhood
BP GO:0034032 purine nucleoside bisphosphate metabolic process IEP Neighborhood
BP GO:0035383 thioester metabolic process IEP Neighborhood
CC GO:0044425 membrane part IEP Neighborhood
BP GO:0046519 sphingoid metabolic process IEP Neighborhood
BP GO:0046520 sphingoid biosynthetic process IEP Neighborhood
MF GO:0046910 pectinesterase inhibitor activity IEP Neighborhood
BP GO:0048527 lateral root development IEP Neighborhood
BP GO:0048528 post-embryonic root development IEP Neighborhood
BP GO:0090696 post-embryonic plant organ development IEP Neighborhood
BP GO:0097164 ammonium ion metabolic process IEP Neighborhood
BP GO:1901615 organic hydroxy compound metabolic process IEP Neighborhood
BP GO:1901617 organic hydroxy compound biosynthetic process IEP Neighborhood
InterPro domains Description Start Stop
IPR000092 Polyprenyl_synt 93 330
No external refs found!