1. Home
  2. Species
  3. Zea mays
  4. Sequence
  5. Zm00001e009321_P001

Zm00001e009321_P001


Description : monomeric E3 ubiquitin ligase (HECT)


Gene families : OG0001713 (Archaeplastida) Phylogenetic Tree(s): OG0001713_tree ,
OG_05_0001924 (LandPlants) Phylogenetic Tree(s): OG_05_0001924_tree ,
OG_06_0002093 (SeedPlants) Phylogenetic Tree(s): OG_06_0002093_tree

Sequence : coding (download), protein (download)


Download

Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Zm00001e009321_P001
Cluster HCCA: Cluster_61

Target Alias Description ECC score Gene Family Method Actions
AMTR_s00033p00211330 evm_27.TU.AmTr_v1... Protein degradation.peptide tagging.Ubiquitin... 0.13 Archaeplastida
AMTR_s00061p00204480 No alias Protein degradation.peptide tagging.Ubiquitin... 0.09 Archaeplastida
AT1G55860 UPL1 ubiquitin-protein ligase 1 0.04 Archaeplastida
AT1G70320 UPL2 ubiquitin-protein ligase 2 0.09 Archaeplastida
Cre10.g433900 No alias Protein modification.protein... 0.02 Archaeplastida
GSVIVT01009206001 No alias Protein degradation.peptide tagging.Ubiquitin... 0.08 Archaeplastida
GSVIVT01009208001 No alias E3 ubiquitin-protein ligase UPL2 OS=Arabidopsis thaliana 0.04 Archaeplastida
GSVIVT01014697001 No alias E3 ubiquitin-protein ligase UPL1 OS=Arabidopsis thaliana 0.06 Archaeplastida
GSVIVT01014698001 No alias Protein degradation.peptide tagging.Ubiquitin... 0.05 Archaeplastida
Gb_17424 No alias monomeric E3 ubiquitin ligase (HECT) 0.06 Archaeplastida
Gb_21632 No alias monomeric E3 ubiquitin ligase (HECT) 0.07 Archaeplastida
Gb_26784 No alias E3 ubiquitin-protein ligase UPL1 OS=Arabidopsis thaliana... 0.04 Archaeplastida
Gb_26785 No alias monomeric E3 ubiquitin ligase (HECT) 0.02 Archaeplastida
LOC_Os09g07900.1 No alias monomeric E3 ubiquitin ligase (HECT) 0.04 Archaeplastida
LOC_Os12g24080.1 No alias monomeric E3 ubiquitin ligase (HECT) 0.03 Archaeplastida
MA_20049g0010 No alias monomeric E3 ubiquitin ligase (HECT) 0.07 Archaeplastida
MA_20049g0020 No alias E3 ubiquitin-protein ligase UPL1 OS=Arabidopsis thaliana... 0.05 Archaeplastida
MA_7295g0020 No alias E3 ubiquitin-protein ligase UPL2 OS=Arabidopsis thaliana... 0.04 Archaeplastida
Mp4g21620.1 No alias monomeric E3 ubiquitin ligase (HECT) 0.04 Archaeplastida
Pp3c11_25020V3.1 No alias ubiquitin-protein ligase 1 0.1 Archaeplastida
Pp3c7_8070V3.1 No alias ubiquitin-protein ligase 1 0.06 Archaeplastida
Pp3c7_8076V3.1 No alias ubiquitin-protein ligase 1 0.08 Archaeplastida
Smo154179 No alias Protein degradation.peptide tagging.Ubiquitin... 0.09 Archaeplastida
Solyc04g076620.4.1 No alias monomeric E3 ubiquitin ligase (HECT) 0.09 Archaeplastida
Solyc07g065630.4.1 No alias E3 ubiquitin-protein ligase UPL1 OS=Arabidopsis thaliana... 0.12 Archaeplastida

Type GO Term Name Evidence Source
MF GO:0004842 ubiquitin-protein transferase activity IEA Interproscan
Toggle parental
Type GO Term Name Evidence Source
MF GO:0004222 metalloendopeptidase activity IEP Neighborhood
MF GO:0004843 thiol-dependent ubiquitin-specific protease activity IEP Neighborhood
MF GO:0005488 binding IEP Neighborhood
MF GO:0005515 protein binding IEP Neighborhood
BP GO:0006325 chromatin organization IEP Neighborhood
BP GO:0006479 protein methylation IEP Neighborhood
BP GO:0006508 proteolysis IEP Neighborhood
BP GO:0006890 retrograde vesicle-mediated transport, Golgi to ER IEP Neighborhood
BP GO:0007155 cell adhesion IEP Neighborhood
MF GO:0008170 N-methyltransferase activity IEP Neighborhood
BP GO:0008213 protein alkylation IEP Neighborhood
MF GO:0008233 peptidase activity IEP Neighborhood
MF GO:0008237 metallopeptidase activity IEP Neighborhood
MF GO:0008270 zinc ion binding IEP Neighborhood
MF GO:0008276 protein methyltransferase activity IEP Neighborhood
MF GO:0008757 S-adenosylmethionine-dependent methyltransferase activity IEP Neighborhood
MF GO:0016278 lysine N-methyltransferase activity IEP Neighborhood
MF GO:0016279 protein-lysine N-methyltransferase activity IEP Neighborhood
BP GO:0016569 covalent chromatin modification IEP Neighborhood
BP GO:0016570 histone modification IEP Neighborhood
BP GO:0016571 histone methylation IEP Neighborhood
BP GO:0016579 protein deubiquitination IEP Neighborhood
BP GO:0018022 peptidyl-lysine methylation IEP Neighborhood
MF GO:0018024 histone-lysine N-methyltransferase activity IEP Neighborhood
BP GO:0018193 peptidyl-amino acid modification IEP Neighborhood
BP GO:0018205 peptidyl-lysine modification IEP Neighborhood
MF GO:0019783 ubiquitin-like protein-specific protease activity IEP Neighborhood
BP GO:0022610 biological adhesion IEP Neighborhood
BP GO:0032259 methylation IEP Neighborhood
BP GO:0034968 histone lysine methylation IEP Neighborhood
MF GO:0036459 thiol-dependent ubiquitinyl hydrolase activity IEP Neighborhood
MF GO:0042054 histone methyltransferase activity IEP Neighborhood
MF GO:0043169 cation binding IEP Neighborhood
BP GO:0043414 macromolecule methylation IEP Neighborhood
MF GO:0046872 metal ion binding IEP Neighborhood
MF GO:0046914 transition metal ion binding IEP Neighborhood
BP GO:0048193 Golgi vesicle transport IEP Neighborhood
MF GO:0070011 peptidase activity, acting on L-amino acid peptides IEP Neighborhood
BP GO:0070646 protein modification by small protein removal IEP Neighborhood
MF GO:0101005 ubiquitinyl hydrolase activity IEP Neighborhood
InterPro domains Description Start Stop
IPR025527 DUF4414 2627 2654
IPR025527 DUF4414 2701 2732
IPR025527 DUF4414 2664 2695
IPR015940 UBA 1281 1317
IPR000569 HECT_dom 3404 3714
IPR010314 E3_Ub_ligase_DUF913 421 784
IPR010309 E3_Ub_ligase_DUF908 85 361
No external refs found!