Zm00001e009620_P001

Description : component psRPS3 of small ribosomal subunit proteome

Gene families : OG0004041 (Archaeplastida) Phylogenetic Tree(s): OG0004041_tree ,
OG_05_0003272 (LandPlants) Phylogenetic Tree(s): OG_05_0003272_tree ,
OG_06_0002671 (SeedPlants) Phylogenetic Tree(s): OG_06_0002671_tree

Sequence : coding (download), protein (download)

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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.

Type	Description	Actions
Neighborhood	HRR: Zm00001e009620_P001
Cluster	HCCA: Cluster_255

Target	Alias	Description	ECC score	Gene Family Method
ATCG00800	No alias	structural constituent of ribosome	0.1	Archaeplastida
Gb_15033	No alias	component psRPS3 of small ribosomal subunit proteome	0.02	Archaeplastida
LOC_Os04g16824.1	No alias	component psRPS3 of small ribosomal subunit proteome	0.08	Archaeplastida
LOC_Os09g24416.1	No alias	component psRPS3 of small ribosomal subunit proteome	0.08	Archaeplastida
Mp2g09240.1	No alias	no hits & (original description: none)	0.03	Archaeplastida
Solyc00g500034.1.1	No alias	component psRPL22 of large ribosomal subunit proteome....	0.03	Archaeplastida
Zm00001e042063_P001	No alias	component psRPS3 of small ribosomal subunit proteome	0.07	Archaeplastida
Zm00001e042094_P001	No alias	component psRPS3 of small ribosomal subunit proteome	0.07	Archaeplastida
Zm00001e042371_P001	No alias	component psRPS3 of small ribosomal subunit proteome	0.03	Archaeplastida
Zm00001e042375_P001	No alias	component psRPS3 of small ribosomal subunit proteome	0.07	Archaeplastida
Zm00001e042402_P001	No alias	component psRPS3 of small ribosomal subunit proteome	0.07	Archaeplastida
Zm00001e042447_P001	No alias	component psRPS3 of small ribosomal subunit proteome	0.07	Archaeplastida

Type	GO Term	Name	Evidence	Source
MF	GO:0003674	molecular_function	None	Extended
MF	GO:0003735	structural constituent of ribosome	IEA	Interproscan
MF	GO:0005198	structural molecule activity	None	Extended
BP	GO:0006412	translation	IEA	Interproscan
BP	GO:0006518	peptide metabolic process	None	Extended
BP	GO:0006807	nitrogen compound metabolic process	None	Extended
BP	GO:0008150	biological_process	None	Extended
BP	GO:0008152	metabolic process	None	Extended
BP	GO:0009058	biosynthetic process	None	Extended
BP	GO:0009059	macromolecule biosynthetic process	None	Extended
BP	GO:0009987	cellular process	None	Extended
BP	GO:0019538	protein metabolic process	None	Extended
BP	GO:0034641	cellular nitrogen compound metabolic process	None	Extended
BP	GO:0034645	cellular macromolecule biosynthetic process	None	Extended
BP	GO:0043043	peptide biosynthetic process	None	Extended
BP	GO:0043170	macromolecule metabolic process	None	Extended
BP	GO:0043603	cellular amide metabolic process	None	Extended
BP	GO:0043604	amide biosynthetic process	None	Extended
BP	GO:0044237	cellular metabolic process	None	Extended
BP	GO:0044238	primary metabolic process	None	Extended
BP	GO:0044249	cellular biosynthetic process	None	Extended
BP	GO:0044260	cellular macromolecule metabolic process	None	Extended
BP	GO:0044267	cellular protein metabolic process	None	Extended
BP	GO:0044271	cellular nitrogen compound biosynthetic process	None	Extended
BP	GO:0071704	organic substance metabolic process	None	Extended
BP	GO:1901564	organonitrogen compound metabolic process	None	Extended
BP	GO:1901566	organonitrogen compound biosynthetic process	None	Extended
BP	GO:1901576	organic substance biosynthetic process	None	Extended

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Type	GO Term	Name	Evidence	Source
BP	GO:0000272	polysaccharide catabolic process	IEP	Neighborhood
CC	GO:0005840	ribosome	IEP	Neighborhood
MF	GO:0016160	amylase activity	IEP	Neighborhood
MF	GO:0016161	beta-amylase activity	IEP	Neighborhood
CC	GO:0031360	intrinsic component of thylakoid membrane	IEP	Neighborhood
CC	GO:0031361	integral component of thylakoid membrane	IEP	Neighborhood
CC	GO:0032991	protein-containing complex	IEP	Neighborhood
CC	GO:0043226	organelle	IEP	Neighborhood
CC	GO:0043228	non-membrane-bounded organelle	IEP	Neighborhood
CC	GO:0043229	intracellular organelle	IEP	Neighborhood
CC	GO:0043232	intracellular non-membrane-bounded organelle	IEP	Neighborhood
CC	GO:0044424	intracellular part	IEP	Neighborhood
CC	GO:0044444	cytoplasmic part	IEP	Neighborhood
CC	GO:0044464	cell part	IEP	Neighborhood
MF	GO:0048037	cofactor binding	IEP	Neighborhood
MF	GO:0051536	iron-sulfur cluster binding	IEP	Neighborhood
MF	GO:0051540	metal cluster binding	IEP	Neighborhood
BP	GO:0055114	oxidation-reduction process	IEP	Neighborhood
CC	GO:1990904	ribonucleoprotein complex	IEP	Neighborhood

InterPro domains	Description	Start	Stop
IPR001351	Ribosomal_S3_C	137	219

External Links

No external refs found!

Zm00001e009620_P001

Expression Profile

Co-expression Networks

Expression Context Conservation (ECC)

Functional Annotation