Coexpression cluster: Cluster_255 (HCCA)

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Average Expression Profile

Enriched GO Terms (corrected p-value < 0.05) (download table)
ID Label % in cluster Enrichment log2 p-value Corrected p-value
GO:0043604 amide biosynthetic process 18.99% (15/79) 4.58 0.0 0.0
GO:0043043 peptide biosynthetic process 18.99% (15/79) 4.62 0.0 0.0
GO:0006518 peptide metabolic process 18.99% (15/79) 4.59 0.0 0.0
GO:0003735 structural constituent of ribosome 18.99% (15/79) 4.64 0.0 0.0
GO:0043603 cellular amide metabolic process 18.99% (15/79) 4.52 0.0 0.0
GO:0005198 structural molecule activity 18.99% (15/79) 4.52 0.0 0.0
GO:0006412 translation 18.99% (15/79) 4.67 0.0 0.0
GO:0034645 cellular macromolecule biosynthetic process 20.25% (16/79) 4.11 0.0 0.0
GO:0044271 cellular nitrogen compound biosynthetic process 21.52% (17/79) 3.89 0.0 0.0
GO:0016984 ribulose-bisphosphate carboxylase activity 7.59% (6/79) 8.45 0.0 0.0
GO:0009059 macromolecule biosynthetic process 20.25% (16/79) 4.02 0.0 0.0
GO:1901566 organonitrogen compound biosynthetic process 20.25% (16/79) 3.95 0.0 0.0
GO:0005840 ribosome 16.46% (13/79) 4.54 0.0 0.0
GO:0043228 non-membrane-bounded organelle 16.46% (13/79) 4.38 0.0 0.0
GO:0043232 intracellular non-membrane-bounded organelle 16.46% (13/79) 4.38 0.0 0.0
GO:0019843 rRNA binding 8.86% (7/79) 7.09 0.0 0.0
GO:1990904 ribonucleoprotein complex 16.46% (13/79) 4.35 0.0 0.0
GO:0015977 carbon fixation 7.59% (6/79) 7.72 0.0 0.0
GO:0044249 cellular biosynthetic process 21.52% (17/79) 3.34 0.0 0.0
GO:1901576 organic substance biosynthetic process 21.52% (17/79) 3.26 0.0 0.0
GO:0009058 biosynthetic process 21.52% (17/79) 3.13 0.0 0.0
GO:0034641 cellular nitrogen compound metabolic process 21.52% (17/79) 3.1 0.0 0.0
GO:0044444 cytoplasmic part 16.46% (13/79) 3.6 0.0 0.0
GO:0043229 intracellular organelle 16.46% (13/79) 3.45 0.0 0.0
GO:0043226 organelle 16.46% (13/79) 3.45 0.0 0.0
GO:0016831 carboxy-lyase activity 7.59% (6/79) 6.04 0.0 0.0
GO:0016830 carbon-carbon lyase activity 7.59% (6/79) 5.69 0.0 0.0
GO:0051540 metal cluster binding 7.59% (6/79) 5.42 0.0 0.0
GO:0051536 iron-sulfur cluster binding 7.59% (6/79) 5.42 0.0 0.0
GO:0032991 protein-containing complex 16.46% (13/79) 2.97 0.0 0.0
GO:0008152 metabolic process 36.71% (29/79) 1.62 0.0 0.0
GO:0071704 organic substance metabolic process 29.11% (23/79) 1.69 0.0 1e-06
GO:0000287 magnesium ion binding 6.33% (5/79) 5.15 0.0 2e-06
GO:0016829 lyase activity 7.59% (6/79) 4.32 1e-06 3e-06
GO:0044424 intracellular part 16.46% (13/79) 2.43 1e-06 4e-06
GO:0044267 cellular protein metabolic process 18.99% (15/79) 2.15 1e-06 5e-06
GO:0044464 cell part 16.46% (13/79) 2.37 1e-06 6e-06
GO:0044260 cellular macromolecule metabolic process 20.25% (16/79) 1.96 3e-06 1.2e-05
GO:0003723 RNA binding 8.86% (7/79) 3.48 3e-06 1.4e-05
GO:0019538 protein metabolic process 18.99% (15/79) 1.91 8e-06 3.5e-05
GO:1901564 organonitrogen compound metabolic process 20.25% (16/79) 1.75 1.6e-05 6.5e-05
GO:0006807 nitrogen compound metabolic process 21.52% (17/79) 1.61 3.1e-05 0.000124
GO:0008150 biological_process 37.97% (30/79) 1.05 3.4e-05 0.000135
GO:0043170 macromolecule metabolic process 20.25% (16/79) 1.65 3.8e-05 0.000144
GO:0044237 cellular metabolic process 21.52% (17/79) 1.51 7.2e-05 0.000269
GO:0044238 primary metabolic process 21.52% (17/79) 1.32 0.000357 0.001284
GO:0003674 molecular_function 46.84% (37/79) 0.73 0.000353 0.001295
GO:0009987 cellular process 21.52% (17/79) 1.28 0.000489 0.001722
GO:0005575 cellular_component 16.46% (13/79) 1.29 0.002323 0.008013
GO:0048037 cofactor binding 7.59% (6/79) 2.08 0.003 0.010138
GO:0003676 nucleic acid binding 11.39% (9/79) 1.38 0.007503 0.024863
GO:0005488 binding 26.58% (21/79) 0.7 0.014089 0.045788
Enriched Clades (corrected p-value < 0.05) (download table)
Clade % in cluster Enrichment log2 p-value Corrected p-value Gene Family Method
No enriched Clades found
Similar Clusters (download table)
Species Clustering Method Target Jaccard index Gene Family Method (for comparison) Actions
Arabidopsis thaliana HCCA Cluster_2 0.059 Archaeplastida Compare
Arabidopsis thaliana HCCA Cluster_61 0.02 Archaeplastida Compare
Arabidopsis thaliana HCCA Cluster_107 0.074 Archaeplastida Compare
Arabidopsis thaliana HCCA Cluster_142 0.025 Archaeplastida Compare
Amborella trichopoda HCCA Cluster_92 0.091 Archaeplastida Compare
Amborella trichopoda HCCA Cluster_151 0.02 Archaeplastida Compare
Amborella trichopoda HCCA Cluster_160 0.02 Archaeplastida Compare
Amborella trichopoda HCCA Cluster_199 0.022 Archaeplastida Compare
Amborella trichopoda HCCA Cluster_240 0.027 Archaeplastida Compare
Gingko biloba HCCA Cluster_30 0.05 Archaeplastida Compare
Gingko biloba HCCA Cluster_78 0.053 Archaeplastida Compare
Gingko biloba HCCA Cluster_89 0.033 Archaeplastida Compare
Gingko biloba HCCA Cluster_299 0.023 Archaeplastida Compare
Zea mays HCCA Cluster_44 0.053 Archaeplastida Compare
Zea mays HCCA Cluster_45 0.044 Archaeplastida Compare
Zea mays HCCA Cluster_68 0.019 Archaeplastida Compare
Zea mays HCCA Cluster_83 0.03 Archaeplastida Compare
Zea mays HCCA Cluster_93 0.059 Archaeplastida Compare
Zea mays HCCA Cluster_100 0.031 Archaeplastida Compare
Zea mays HCCA Cluster_109 0.048 Archaeplastida Compare
Zea mays HCCA Cluster_116 0.02 Archaeplastida Compare
Zea mays HCCA Cluster_149 0.025 Archaeplastida Compare
Zea mays HCCA Cluster_160 0.091 Archaeplastida Compare
Zea mays HCCA Cluster_172 0.03 Archaeplastida Compare
Zea mays HCCA Cluster_246 0.025 Archaeplastida Compare
Zea mays HCCA Cluster_263 0.035 Archaeplastida Compare
Marchantia polymorpha HCCA Cluster_2 0.021 Archaeplastida Compare
Marchantia polymorpha HCCA Cluster_8 0.049 Archaeplastida Compare
Marchantia polymorpha HCCA Cluster_140 0.031 Archaeplastida Compare
Physcomitrella patens HCCA Cluster_217 0.023 Archaeplastida Compare
Physcomitrella patens HCCA Cluster_236 0.023 Archaeplastida Compare
Oryza sativa HCCA Cluster_125 0.152 Archaeplastida Compare
Oryza sativa HCCA Cluster_182 0.029 Archaeplastida Compare
Oryza sativa HCCA Cluster_233 0.025 Archaeplastida Compare
Oryza sativa HCCA Cluster_238 0.029 Archaeplastida Compare
Selaginella moellendorffii HCCA Cluster_27 0.092 Archaeplastida Compare
Solanum lycopersicum HCCA Cluster_3 0.039 Archaeplastida Compare
Solanum lycopersicum HCCA Cluster_4 0.022 Archaeplastida Compare
Solanum lycopersicum HCCA Cluster_5 0.098 Archaeplastida Compare
Solanum lycopersicum HCCA Cluster_16 0.025 Archaeplastida Compare
Solanum lycopersicum HCCA Cluster_34 0.021 Archaeplastida Compare
Solanum lycopersicum HCCA Cluster_48 0.019 Archaeplastida Compare
Solanum lycopersicum HCCA Cluster_74 0.022 Archaeplastida Compare
Solanum lycopersicum HCCA Cluster_76 0.05 Archaeplastida Compare
Solanum lycopersicum HCCA Cluster_83 0.073 Archaeplastida Compare
Solanum lycopersicum HCCA Cluster_90 0.019 Archaeplastida Compare
Solanum lycopersicum HCCA Cluster_93 0.024 Archaeplastida Compare
Solanum lycopersicum HCCA Cluster_149 0.061 Archaeplastida Compare
Solanum lycopersicum HCCA Cluster_179 0.025 Archaeplastida Compare
Solanum lycopersicum HCCA Cluster_189 0.026 Archaeplastida Compare
Solanum lycopersicum HCCA Cluster_199 0.034 Archaeplastida Compare
Solanum lycopersicum HCCA Cluster_287 0.03 Archaeplastida Compare
Solanum lycopersicum HCCA Cluster_312 0.025 Archaeplastida Compare
Vitis vinifera HCCA Cluster_64 0.027 Archaeplastida Compare
Vitis vinifera HCCA Cluster_99 0.02 Archaeplastida Compare
Vitis vinifera HCCA Cluster_175 0.021 Archaeplastida Compare
Vitis vinifera HCCA Cluster_198 0.021 Archaeplastida Compare
Sequences (79) (download table)

InterPro Domains

GO Terms

Family Terms