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AT3G15430


Description : Regulator of chromosome condensation (RCC1) family protein


Gene families : OG0008890 (Archaeplastida) Phylogenetic Tree(s): OG0008890_tree ,
OG_05_0009035 (LandPlants) Phylogenetic Tree(s): OG_05_0009035_tree ,
OG_06_0009908 (SeedPlants) Phylogenetic Tree(s): OG_06_0009908_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: AT3G15430
Cluster HCCA: Cluster_260

Target Alias Description ECC score Gene Family Method Actions
AMTR_s00009p00266800 evm_27.TU.AmTr_v1... Ultraviolet-B receptor UVR8 OS=Arabidopsis thaliana 0.02 Archaeplastida
Zm00001e009525_P003 No alias Ultraviolet-B receptor UVR8 OS=Arabidopsis thaliana... 0.03 Archaeplastida
Zm00001e033440_P001 No alias Ultraviolet-B receptor UVR8 OS=Arabidopsis thaliana... 0.03 Archaeplastida

Type GO Term Name Evidence Source
CC GO:0005575 cellular_component ND Interproscan
BP GO:0006486 protein glycosylation RCA Interproscan
BP GO:0008150 biological_process ND Interproscan
MF GO:0008536 Ran GTPase binding ISS Interproscan
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Type GO Term Name Evidence Source
CC GO:0000159 protein phosphatase type 2A complex IEP Neighborhood
MF GO:0003677 DNA binding IEP Neighborhood
MF GO:0003973 (S)-2-hydroxy-acid oxidase activity IEP Neighborhood
MF GO:0004129 cytochrome-c oxidase activity IEP Neighborhood
MF GO:0004644 phosphoribosylglycinamide formyltransferase activity IEP Neighborhood
MF GO:0005344 oxygen carrier activity IEP Neighborhood
CC GO:0005737 cytoplasm IEP Neighborhood
CC GO:0005783 endoplasmic reticulum IEP Neighborhood
BP GO:0006446 regulation of translational initiation IEP Neighborhood
BP GO:0006665 sphingolipid metabolic process IEP Neighborhood
MF GO:0008864 formyltetrahydrofolate deformylase activity IEP Neighborhood
MF GO:0008891 glycolate oxidase activity IEP Neighborhood
BP GO:0010200 response to chitin IEP Neighborhood
BP GO:0010223 secondary shoot formation IEP Neighborhood
BP GO:0010243 response to organonitrogen compound IEP Neighborhood
BP GO:0010346 shoot axis formation IEP Neighborhood
MF GO:0015002 heme-copper terminal oxidase activity IEP Neighborhood
BP GO:0015669 gas transport IEP Neighborhood
BP GO:0015671 oxygen transport IEP Neighborhood
MF GO:0016675 oxidoreductase activity, acting on a heme group of donors IEP Neighborhood
MF GO:0016676 oxidoreductase activity, acting on a heme group of donors, oxygen as acceptor IEP Neighborhood
MF GO:0016742 hydroxymethyl-, formyl- and related transferase activity IEP Neighborhood
MF GO:0016899 oxidoreductase activity, acting on the CH-OH group of donors, oxygen as acceptor IEP Neighborhood
BP GO:0030148 sphingolipid biosynthetic process IEP Neighborhood
BP GO:0042493 response to drug IEP Neighborhood
MF GO:0045140 inositol phosphoceramide synthase activity IEP Neighborhood
MF GO:0080045 quercetin 3'-O-glucosyltransferase activity IEP Neighborhood
BP GO:0080148 negative regulation of response to water deprivation IEP Neighborhood
BP GO:1901698 response to nitrogen compound IEP Neighborhood
BP GO:2000070 regulation of response to water deprivation IEP Neighborhood
InterPro domains Description Start Stop
IPR000408 Reg_chr_condens 287 338
IPR000408 Reg_chr_condens 341 382
IPR000408 Reg_chr_condens 181 231
IPR000408 Reg_chr_condens 234 284
No external refs found!