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  5. Zm00001e010188_P001

Zm00001e010188_P001


Description : Alpha-L-fucosidase 1 OS=Arabidopsis thaliana (sp|q8gw72|fuco1_arath : 452.0) & Enzyme classification.EC_3 hydrolases.EC_3.2 glycosylase(50.3.2 : 48.3)


Gene families : OG0001434 (Archaeplastida) Phylogenetic Tree(s): OG0001434_tree ,
OG_05_0001016 (LandPlants) Phylogenetic Tree(s): OG_05_0001016_tree ,
OG_06_0001849 (SeedPlants) Phylogenetic Tree(s): OG_06_0001849_tree

Sequence : coding (download), protein (download)


Attention: This gene has low abundance.


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Zm00001e010188_P001
Cluster HCCA: Cluster_87

Target Alias Description ECC score Gene Family Method Actions
AMTR_s00009p00015960 evm_27.TU.AmTr_v1... Alpha-L-fucosidase 1 OS=Arabidopsis thaliana 0.03 Archaeplastida
AMTR_s00050p00034460 evm_27.TU.AmTr_v1... Enzyme classification.EC_3 hydrolases.EC_3.2 glycosylase 0.05 Archaeplastida
Gb_14859 No alias Alpha-L-fucosidase 1 OS=Arabidopsis thaliana... 0.04 Archaeplastida
LOC_Os09g34920.1 No alias Putative alpha-L-fucosidase 1 OS=Oryza sativa subsp.... 0.03 Archaeplastida
MA_16736g0010 No alias Putative alpha-L-fucosidase 1 OS=Oryza sativa subsp.... 0.05 Archaeplastida
Smo415432 No alias Putative alpha-L-fucosidase 1 OS=Oryza sativa subsp. japonica 0.03 Archaeplastida

Type GO Term Name Evidence Source
MF GO:0004560 alpha-L-fucosidase activity IEA Interproscan
BP GO:0005975 carbohydrate metabolic process IEA Interproscan
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Type GO Term Name Evidence Source
MF GO:0000287 magnesium ion binding IEP Neighborhood
CC GO:0005575 cellular_component IEP Neighborhood
BP GO:0008037 cell recognition IEP Neighborhood
MF GO:0008146 sulfotransferase activity IEP Neighborhood
MF GO:0010333 terpene synthase activity IEP Neighborhood
CC GO:0016021 integral component of membrane IEP Neighborhood
MF GO:0016782 transferase activity, transferring sulfur-containing groups IEP Neighborhood
MF GO:0016788 hydrolase activity, acting on ester bonds IEP Neighborhood
MF GO:0016829 lyase activity IEP Neighborhood
MF GO:0016830 carbon-carbon lyase activity IEP Neighborhood
MF GO:0016831 carboxy-lyase activity IEP Neighborhood
MF GO:0016835 carbon-oxygen lyase activity IEP Neighborhood
MF GO:0016838 carbon-oxygen lyase activity, acting on phosphates IEP Neighborhood
MF GO:0019842 vitamin binding IEP Neighborhood
BP GO:0022414 reproductive process IEP Neighborhood
MF GO:0030170 pyridoxal phosphate binding IEP Neighborhood
CC GO:0031224 intrinsic component of membrane IEP Neighborhood
CC GO:0044425 membrane part IEP Neighborhood
BP GO:0048544 recognition of pollen IEP Neighborhood
MF GO:0070279 vitamin B6 binding IEP Neighborhood
InterPro domains Description Start Stop
IPR000933 Glyco_hydro_29 121 386
No external refs found!