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  5. Zm00001e010432_P001

Zm00001e010432_P001


Description : ATP-dependent DNA helicase SRS2-like protein At4g25120 OS=Arabidopsis thaliana (sp|d1kf50|srs2l_arath : 1119.0)


Gene families : OG0001612 (Archaeplastida) Phylogenetic Tree(s): OG0001612_tree ,
OG_05_0004596 (LandPlants) Phylogenetic Tree(s): OG_05_0004596_tree ,
OG_06_0005341 (SeedPlants) Phylogenetic Tree(s): OG_06_0005341_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Zm00001e010432_P001
Cluster HCCA: Cluster_225

Target Alias Description ECC score Gene Family Method Actions
AT4G25120 SRS2, ATSRS2 P-loop containing nucleoside triphosphate hydrolases... 0.04 Archaeplastida
Cre07.g343333 No alias ATP-dependent DNA helicase SRS2-like protein At4g25120... 0.02 Archaeplastida
GSVIVT01013853001 No alias ATP-dependent DNA helicase SRS2-like protein At4g25120... 0.05 Archaeplastida
Gb_06418 No alias ATP-dependent DNA helicase SRS2-like protein At4g25120... 0.03 Archaeplastida
Gb_06420 No alias ATP-dependent DNA helicase SRS2-like protein At4g25120... 0.05 Archaeplastida
Gb_06422 No alias ATP-dependent DNA helicase SRS2-like protein At4g25120... 0.03 Archaeplastida
MA_10437065g0010 No alias ATP-dependent DNA helicase SRS2-like protein At4g25120... 0.04 Archaeplastida
MA_44585g0010 No alias ATP-dependent DNA helicase SRS2-like protein At4g25120... 0.03 Archaeplastida
Solyc03g093840.3.1 No alias no hits & (original description: none) 0.03 Archaeplastida
Solyc03g093850.2.1 No alias ATP-dependent DNA helicase SRS2-like protein At4g25120... 0.1 Archaeplastida

Type GO Term Name Evidence Source
MF GO:0005524 ATP binding IEA Interproscan
MF GO:0016787 hydrolase activity IEA Interproscan
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Type GO Term Name Evidence Source
MF GO:0003676 nucleic acid binding IEP Neighborhood
MF GO:0003677 DNA binding IEP Neighborhood
MF GO:0003678 DNA helicase activity IEP Neighborhood
MF GO:0003689 DNA clamp loader activity IEP Neighborhood
MF GO:0003774 motor activity IEP Neighborhood
MF GO:0003777 microtubule motor activity IEP Neighborhood
MF GO:0003887 DNA-directed DNA polymerase activity IEP Neighborhood
MF GO:0004386 helicase activity IEP Neighborhood
MF GO:0004518 nuclease activity IEP Neighborhood
MF GO:0004519 endonuclease activity IEP Neighborhood
MF GO:0005515 protein binding IEP Neighborhood
CC GO:0005663 DNA replication factor C complex IEP Neighborhood
CC GO:0005694 chromosome IEP Neighborhood
BP GO:0006139 nucleobase-containing compound metabolic process IEP Neighborhood
BP GO:0006259 DNA metabolic process IEP Neighborhood
BP GO:0006260 DNA replication IEP Neighborhood
BP GO:0006725 cellular aromatic compound metabolic process IEP Neighborhood
BP GO:0006807 nitrogen compound metabolic process IEP Neighborhood
BP GO:0006928 movement of cell or subcellular component IEP Neighborhood
BP GO:0006996 organelle organization IEP Neighborhood
BP GO:0007017 microtubule-based process IEP Neighborhood
BP GO:0007018 microtubule-based movement IEP Neighborhood
MF GO:0008017 microtubule binding IEP Neighborhood
MF GO:0008092 cytoskeletal protein binding IEP Neighborhood
MF GO:0008094 DNA-dependent ATPase activity IEP Neighborhood
BP GO:0009059 macromolecule biosynthetic process IEP Neighborhood
BP GO:0009987 cellular process IEP Neighborhood
MF GO:0015631 tubulin binding IEP Neighborhood
MF GO:0016462 pyrophosphatase activity IEP Neighborhood
MF GO:0016788 hydrolase activity, acting on ester bonds IEP Neighborhood
MF GO:0016817 hydrolase activity, acting on acid anhydrides IEP Neighborhood
MF GO:0016818 hydrolase activity, acting on acid anhydrides, in phosphorus-containing anhydrides IEP Neighborhood
MF GO:0017111 nucleoside-triphosphatase activity IEP Neighborhood
MF GO:0033170 protein-DNA loading ATPase activity IEP Neighborhood
CC GO:0033643 host cell part IEP Neighborhood
CC GO:0033646 host intracellular part IEP Neighborhood
CC GO:0033647 host intracellular organelle IEP Neighborhood
CC GO:0033648 host intracellular membrane-bounded organelle IEP Neighborhood
MF GO:0034061 DNA polymerase activity IEP Neighborhood
BP GO:0034641 cellular nitrogen compound metabolic process IEP Neighborhood
BP GO:0034645 cellular macromolecule biosynthetic process IEP Neighborhood
CC GO:0042025 host cell nucleus IEP Neighborhood
CC GO:0044217 other organism part IEP Neighborhood
BP GO:0044249 cellular biosynthetic process IEP Neighborhood
BP GO:0044260 cellular macromolecule metabolic process IEP Neighborhood
BP GO:0046483 heterocycle metabolic process IEP Neighborhood
BP GO:0051276 chromosome organization IEP Neighborhood
BP GO:0090304 nucleic acid metabolic process IEP Neighborhood
MF GO:0140097 catalytic activity, acting on DNA IEP Neighborhood
BP GO:1901360 organic cyclic compound metabolic process IEP Neighborhood
BP GO:1901576 organic substance biosynthetic process IEP Neighborhood
InterPro domains Description Start Stop
IPR034739 UvrD/AddA_N 315 592
IPR014017 DNA_helicase_UvrD-like_C 597 1025
No external refs found!