1. Home
  2. Species
  3. Zea mays
  4. Sequence
  5. Zm00001e010546_P001

Zm00001e010546_P001


Description : transcription factor (MYB)


Gene families : OG0000002 (Archaeplastida) Phylogenetic Tree(s): No tree available for this family ,
OG_05_0000002 (LandPlants) Phylogenetic Tree(s): OG_05_0000002_tree ,
OG_06_0000006 (SeedPlants) Phylogenetic Tree(s): OG_06_0000006_tree

Sequence : coding (download), protein (download)


Attention: This gene has low abundance.


Download

Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Zm00001e010546_P001

Target Alias Description ECC score Gene Family Method Actions
AMTR_s00001p00105570 evm_27.TU.AmTr_v1... RNA biosynthesis.transcriptional activation.MYB... 0.05 Archaeplastida
AMTR_s00045p00146180 evm_27.TU.AmTr_v1... RNA biosynthesis.transcriptional activation.MYB... 0.03 Archaeplastida
AMTR_s00083p00123850 evm_27.TU.AmTr_v1... RNA biosynthesis.transcriptional activation.MYB... 0.03 Archaeplastida
AMTR_s00105p00025610 evm_27.TU.AmTr_v1... No description available 0.02 Archaeplastida
AT2G31180 ATMYB14, MYB14, MYB14AT myb domain protein 14 0.05 Archaeplastida
AT3G08500 AtMYB83, MYB83 myb domain protein 83 0.01 Archaeplastida
AT3G28910 MYB30, ATMYB30 myb domain protein 30 0.01 Archaeplastida
AT3G46130 ATMYB48-1,... myb domain protein 48 0.04 Archaeplastida
AT3G47600 ATMYB94, ATMYBCP70, MYB94 myb domain protein 94 0.04 Archaeplastida
AT4G12350 AtMYB42, MYB42 myb domain protein 42 0.02 Archaeplastida
AT4G25560 AtMYB18, MYB18 myb domain protein 18 0.02 Archaeplastida
AT5G02320 ATMYB3R5, MYB3R-5 myb domain protein 3r-5 0.01 Archaeplastida
AT5G39700 MYB89, AtMYB89 myb domain protein 89 0.01 Archaeplastida
AT5G62470 MYBCOV1, MYB96, ATMYB96 myb domain protein 96 0.01 Archaeplastida
GSVIVT01009280001 No alias RNA biosynthesis.transcriptional activation.MYB... 0.02 Archaeplastida
GSVIVT01015575001 No alias RNA biosynthesis.transcriptional activation.MYB... 0.02 Archaeplastida
GSVIVT01028328001 No alias RNA biosynthesis.transcriptional activation.MYB... 0.01 Archaeplastida
GSVIVT01033670001 No alias RNA biosynthesis.transcriptional activation.MYB... 0.03 Archaeplastida
LOC_Os03g19120.1 No alias transcription factor (MYB) 0.01 Archaeplastida
LOC_Os06g10350.1 No alias transcription factor (MYB) 0.01 Archaeplastida
LOC_Os06g14670.1 No alias transcription factor (MYB) 0.07 Archaeplastida
MA_10225049g0010 No alias transcription factor (MYB) 0.02 Archaeplastida
MA_15687g0010 No alias transcription factor (MYB) 0.01 Archaeplastida
MA_278282g0010 No alias transcription factor (MYB) 0.01 Archaeplastida
MA_31666g0010 No alias transcription factor (MYB) 0.01 Archaeplastida
MA_460508g0010 No alias transcription factor (MYB) 0.02 Archaeplastida
MA_4783697g0010 No alias no hits & (original description: none) 0.02 Archaeplastida
MA_6285g0010 No alias transcription factor (MYB) 0.02 Archaeplastida
MA_8464929g0010 No alias no hits & (original description: none) 0.01 Archaeplastida
MA_9374017g0010 No alias transcription factor (MYB) 0.02 Archaeplastida
Pp3c1_4970V3.1 No alias myb domain protein 106 0.01 Archaeplastida
Smo98669 No alias RNA biosynthesis.transcriptional activation.MYB... 0.02 Archaeplastida
Solyc02g079280.3.1 No alias transcription factor (MYB) 0.04 Archaeplastida
Solyc03g119370.2.1 No alias transcription factor (MYB) 0.01 Archaeplastida
Solyc05g007710.3.1 No alias transcription factor (MYB) 0.02 Archaeplastida
Zm00001e004128_P003 No alias transcription factor (MYB) 0.06 Archaeplastida
Zm00001e026166_P001 No alias transcription factor (MYB) 0.07 Archaeplastida

Type GO Term Name Evidence Source

No GO annotation available for this sequence
Toggle parental
Type GO Term Name Evidence Source
MF GO:0003676 nucleic acid binding IEP Neighborhood
MF GO:0003677 DNA binding IEP Neighborhood
MF GO:0003700 DNA-binding transcription factor activity IEP Neighborhood
BP GO:0006355 regulation of transcription, DNA-templated IEP Neighborhood
BP GO:0009889 regulation of biosynthetic process IEP Neighborhood
BP GO:0010468 regulation of gene expression IEP Neighborhood
BP GO:0010556 regulation of macromolecule biosynthetic process IEP Neighborhood
BP GO:0019219 regulation of nucleobase-containing compound metabolic process IEP Neighborhood
BP GO:0019222 regulation of metabolic process IEP Neighborhood
BP GO:0031323 regulation of cellular metabolic process IEP Neighborhood
BP GO:0031326 regulation of cellular biosynthetic process IEP Neighborhood
CC GO:0033643 host cell part IEP Neighborhood
CC GO:0033646 host intracellular part IEP Neighborhood
CC GO:0033647 host intracellular organelle IEP Neighborhood
CC GO:0033648 host intracellular membrane-bounded organelle IEP Neighborhood
CC GO:0042025 host cell nucleus IEP Neighborhood
MF GO:0043565 sequence-specific DNA binding IEP Neighborhood
CC GO:0044217 other organism part IEP Neighborhood
BP GO:0050789 regulation of biological process IEP Neighborhood
BP GO:0050794 regulation of cellular process IEP Neighborhood
BP GO:0051171 regulation of nitrogen compound metabolic process IEP Neighborhood
BP GO:0051252 regulation of RNA metabolic process IEP Neighborhood
BP GO:0060255 regulation of macromolecule metabolic process IEP Neighborhood
BP GO:0065007 biological regulation IEP Neighborhood
BP GO:0080090 regulation of primary metabolic process IEP Neighborhood
MF GO:0140110 transcription regulator activity IEP Neighborhood
BP GO:1903506 regulation of nucleic acid-templated transcription IEP Neighborhood
BP GO:2000112 regulation of cellular macromolecule biosynthetic process IEP Neighborhood
BP GO:2001141 regulation of RNA biosynthetic process IEP Neighborhood
InterPro domains Description Start Stop
IPR001005 SANT/Myb 67 111
IPR001005 SANT/Myb 14 61
No external refs found!