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  5. Zm00001e010646_P001

Zm00001e010646_P001


Description : transcription factor (GRAS)


Gene families : OG0001538 (Archaeplastida) Phylogenetic Tree(s): OG0001538_tree ,
OG_05_0000997 (LandPlants) Phylogenetic Tree(s): OG_05_0000997_tree ,
OG_06_0001832 (SeedPlants) Phylogenetic Tree(s): OG_06_0001832_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Zm00001e010646_P001
Cluster HCCA: Cluster_54

Target Alias Description ECC score Gene Family Method Actions
AMTR_s00043p00136400 evm_27.TU.AmTr_v1... RNA biosynthesis.transcriptional activation.GRAS... 0.04 Archaeplastida
AMTR_s00088p00161000 evm_27.TU.AmTr_v1... RNA biosynthesis.transcriptional activation.GRAS... 0.03 Archaeplastida
AMTR_s00186p00018500 evm_27.TU.AmTr_v1... RNA biosynthesis.transcriptional activation.GRAS... 0.03 Archaeplastida
AT1G21450 SCL1 SCARECROW-like 1 0.03 Archaeplastida
AT1G50600 SCL5 scarecrow-like 5 0.06 Archaeplastida
AT2G04890 SCL21 SCARECROW-like 21 0.03 Archaeplastida
AT4G17230 SCL13 SCARECROW-like 13 0.09 Archaeplastida
GSVIVT01010007001 No alias RNA biosynthesis.transcriptional activation.GRAS... 0.06 Archaeplastida
GSVIVT01037777001 No alias RNA biosynthesis.transcriptional activation.GRAS... 0.04 Archaeplastida
Gb_30494 No alias transcription factor (GRAS) 0.03 Archaeplastida
Gb_40278 No alias transcription factor (GRAS) 0.02 Archaeplastida
LOC_Os07g36170.2 No alias transcription factor (GRAS) 0.07 Archaeplastida
LOC_Os07g39470.1 No alias transcription factor (GRAS) 0.12 Archaeplastida
Solyc05g054170.4.1 No alias transcription factor (GRAS) 0.07 Archaeplastida
Solyc06g035620.3.1 No alias transcription factor (GRAS) 0.04 Archaeplastida
Solyc07g063940.2.1 No alias transcription factor (GRAS) 0.04 Archaeplastida
Solyc11g012510.3.1 No alias transcription factor (GRAS) 0.03 Archaeplastida
Solyc12g005340.3.1 No alias transcription factor (GRAS) 0.04 Archaeplastida

Type GO Term Name Evidence Source

No GO annotation available for this sequence
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Type GO Term Name Evidence Source
MF GO:0003700 DNA-binding transcription factor activity IEP Neighborhood
BP GO:0006355 regulation of transcription, DNA-templated IEP Neighborhood
BP GO:0009889 regulation of biosynthetic process IEP Neighborhood
BP GO:0010468 regulation of gene expression IEP Neighborhood
BP GO:0010556 regulation of macromolecule biosynthetic process IEP Neighborhood
BP GO:0019219 regulation of nucleobase-containing compound metabolic process IEP Neighborhood
BP GO:0019222 regulation of metabolic process IEP Neighborhood
BP GO:0031323 regulation of cellular metabolic process IEP Neighborhood
BP GO:0031326 regulation of cellular biosynthetic process IEP Neighborhood
MF GO:0043565 sequence-specific DNA binding IEP Neighborhood
BP GO:0050789 regulation of biological process IEP Neighborhood
BP GO:0050794 regulation of cellular process IEP Neighborhood
BP GO:0051171 regulation of nitrogen compound metabolic process IEP Neighborhood
BP GO:0051252 regulation of RNA metabolic process IEP Neighborhood
BP GO:0060255 regulation of macromolecule metabolic process IEP Neighborhood
BP GO:0080090 regulation of primary metabolic process IEP Neighborhood
MF GO:0140110 transcription regulator activity IEP Neighborhood
BP GO:1903506 regulation of nucleic acid-templated transcription IEP Neighborhood
BP GO:2000112 regulation of cellular macromolecule biosynthetic process IEP Neighborhood
BP GO:2001141 regulation of RNA biosynthetic process IEP Neighborhood
InterPro domains Description Start Stop
IPR005202 TF_GRAS 184 553
No external refs found!