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  5. AT3G16280

AT3G16280


Description : Integrase-type DNA-binding superfamily protein


Gene families : OG0000003 (Archaeplastida) Phylogenetic Tree(s): No tree available for this family ,
OG_05_0000001 (LandPlants) Phylogenetic Tree(s): OG_05_0000001_tree ,
OG_06_0042652 (SeedPlants) Phylogenetic Tree(s): No tree available for this family

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: AT3G16280

Target Alias Description ECC score Gene Family Method Actions
AMTR_s00002p00264660 evm_27.TU.AmTr_v1... RNA biosynthesis.transcriptional activation.AP2/ERF... 0.04 Archaeplastida
AMTR_s00007p00268280 evm_27.TU.AmTr_v1... RNA biosynthesis.transcriptional activation.AP2/ERF... 0.06 Archaeplastida
AMTR_s00021p00185480 evm_27.TU.AmTr_v1... RNA biosynthesis.transcriptional activation.AP2/ERF... 0.02 Archaeplastida
AMTR_s00022p00250320 evm_27.TU.AmTr_v1... RNA biosynthesis.transcriptional activation.AP2/ERF... 0.03 Archaeplastida
AMTR_s00040p00195730 evm_27.TU.AmTr_v1... RNA biosynthesis.transcriptional activation.AP2/ERF... 0.03 Archaeplastida
AMTR_s00056p00064760 evm_27.TU.AmTr_v1... RNA biosynthesis.transcriptional activation.AP2/ERF... 0.04 Archaeplastida
AMTR_s00115p00032780 evm_27.TU.AmTr_v1... RNA biosynthesis.transcriptional activation.AP2/ERF... 0.03 Archaeplastida
AT1G12610 DDF1 Integrase-type DNA-binding superfamily protein 0.03 Archaeplastida
AT1G12890 No alias Integrase-type DNA-binding superfamily protein 0.04 Archaeplastida
AT1G28370 ATERF11, ERF11 ERF domain protein 11 0.03 Archaeplastida
AT1G44830 No alias Integrase-type DNA-binding superfamily protein 0.02 Archaeplastida
AT1G71520 No alias Integrase-type DNA-binding superfamily protein 0.02 Archaeplastida
AT2G36450 HRD Integrase-type DNA-binding superfamily protein 0.02 Archaeplastida
AT3G23220 No alias Integrase-type DNA-binding superfamily protein 0.02 Archaeplastida
AT4G17490 ERF-6-6, ERF6, ATERF6 ethylene responsive element binding factor 6 0.07 Archaeplastida
AT4G34410 RRTF1 redox responsive transcription factor 1 0.04 Archaeplastida
AT5G07310 No alias Integrase-type DNA-binding superfamily protein 0.02 Archaeplastida
AT5G11190 SHN3 Integrase-type DNA-binding superfamily protein 0.05 Archaeplastida
AT5G13330 Rap2.6L related to AP2 6l 0.04 Archaeplastida
AT5G51190 No alias Integrase-type DNA-binding superfamily protein 0.02 Archaeplastida
AT5G61890 No alias Integrase-type DNA-binding superfamily protein 0.02 Archaeplastida
AT5G64750 ABR1 Integrase-type DNA-binding superfamily protein 0.02 Archaeplastida
Cre16.g661650 No alias No description available 0.01 Archaeplastida
GSVIVT01001089001 No alias RNA biosynthesis.transcriptional activation.AP2/ERF... 0.02 Archaeplastida
GSVIVT01008649001 No alias RNA biosynthesis.transcriptional activation.AP2/ERF... 0.03 Archaeplastida
GSVIVT01013905001 No alias RNA biosynthesis.transcriptional activation.AP2/ERF... 0.04 Archaeplastida
GSVIVT01013913001 No alias RNA biosynthesis.transcriptional activation.AP2/ERF... 0.04 Archaeplastida
GSVIVT01013917001 No alias RNA biosynthesis.transcriptional activation.AP2/ERF... 0.04 Archaeplastida
GSVIVT01013918001 No alias RNA biosynthesis.transcriptional activation.AP2/ERF... 0.04 Archaeplastida
GSVIVT01013923001 No alias RNA biosynthesis.transcriptional activation.AP2/ERF... 0.05 Archaeplastida
GSVIVT01013929001 No alias RNA biosynthesis.transcriptional activation.AP2/ERF... 0.05 Archaeplastida
GSVIVT01013931001 No alias RNA biosynthesis.transcriptional activation.AP2/ERF... 0.04 Archaeplastida
GSVIVT01013934001 No alias RNA biosynthesis.transcriptional activation.AP2/ERF... 0.05 Archaeplastida
GSVIVT01015037001 No alias RNA biosynthesis.transcriptional activation.AP2/ERF... 0.04 Archaeplastida
GSVIVT01020584001 No alias RNA biosynthesis.transcriptional activation.AP2/ERF... 0.05 Archaeplastida
GSVIVT01031747001 No alias Alpha-amylase type B isozyme OS=Hordeum vulgare 0.04 Archaeplastida
GSVIVT01032983001 No alias RNA biosynthesis.transcriptional activation.AP2/ERF... 0.02 Archaeplastida
GSVIVT01033416001 No alias External stimuli response.biotic... 0.06 Archaeplastida
GSVIVT01035098001 No alias RNA biosynthesis.transcriptional activation.AP2/ERF... 0.03 Archaeplastida
GSVIVT01035852001 No alias RNA biosynthesis.transcriptional activation.AP2/ERF... 0.09 Archaeplastida
GSVIVT01036388001 No alias RNA biosynthesis.transcriptional activation.AP2/ERF... 0.03 Archaeplastida
Gb_03783 No alias transcription factor (ERF) 0.02 Archaeplastida
Gb_07475 No alias no hits & (original description: none) 0.05 Archaeplastida
Gb_07992 No alias Ethylene-responsive transcription factor RAP2-9... 0.04 Archaeplastida
Gb_08031 No alias transcription factor (DREB) 0.05 Archaeplastida
Gb_08437 No alias transcription factor (ERF) 0.03 Archaeplastida
Gb_11793 No alias transcription factor (DREB) 0.06 Archaeplastida
Gb_16683 No alias transcription factor (ERF) 0.05 Archaeplastida
Gb_17501 No alias transcription factor (ERF) 0.05 Archaeplastida
Gb_23321 No alias transcription factor (ERF) 0.02 Archaeplastida
Gb_26067 No alias transcription factor (ERF) 0.05 Archaeplastida
Gb_26667 No alias transcription factor (ERF) 0.06 Archaeplastida
Gb_26856 No alias transcription factor (DREB) 0.02 Archaeplastida
Gb_26857 No alias transcription factor (DREB) 0.02 Archaeplastida
Gb_26858 No alias transcription factor (DREB) 0.02 Archaeplastida
Gb_34846 No alias transcription factor (ERF) 0.03 Archaeplastida
Gb_36992 No alias transcription factor (DREB) 0.04 Archaeplastida
Gb_41020 No alias transcription factor (DREB) 0.03 Archaeplastida
Gb_41836 No alias transcription factor (ERF) 0.02 Archaeplastida
LOC_Os01g66270.1 No alias transcription factor (DREB) 0.03 Archaeplastida
LOC_Os01g73770.1 No alias transcription factor (DREB) 0.06 Archaeplastida
LOC_Os02g10760.1 No alias transcription factor (ERF). SHN-type cutin and suberin... 0.02 Archaeplastida
LOC_Os02g52670.1 No alias no hits & (original description: none) 0.03 Archaeplastida
LOC_Os03g08500.2 No alias no hits & (original description: none) 0.03 Archaeplastida
LOC_Os03g22170.1 No alias transcription factor (ERF) 0.02 Archaeplastida
LOC_Os04g44670.1 No alias transcription factor (DREB) 0.03 Archaeplastida
LOC_Os04g46410.1 No alias transcription factor (DREB) 0.03 Archaeplastida
LOC_Os04g46440.1 No alias transcription factor (DREB) 0.03 Archaeplastida
LOC_Os04g48350.1 No alias Dehydration-responsive element-binding protein 1E... 0.03 Archaeplastida
LOC_Os06g09390.1 No alias transcription factor (ERF) 0.03 Archaeplastida
LOC_Os06g10780.1 No alias transcription factor (DREB) 0.06 Archaeplastida
LOC_Os06g11940.1 No alias Ethylene-responsive transcription factor ERF017... 0.03 Archaeplastida
LOC_Os08g36920.1 No alias transcription factor (ERF) 0.04 Archaeplastida
LOC_Os09g28440.1 No alias transcription factor (ERF) 0.06 Archaeplastida
MA_10430769g0010 No alias transcription factor (DREB) 0.04 Archaeplastida
MA_116185g0010 No alias transcription factor (ERF) 0.03 Archaeplastida
MA_135279g0010 No alias transcription factor (ERF) 0.05 Archaeplastida
MA_18081g0010 No alias transcription factor (DREB) 0.02 Archaeplastida
MA_203191g0010 No alias transcription factor (ERF) 0.07 Archaeplastida
MA_2040g0010 No alias transcription factor (DREB) 0.03 Archaeplastida
MA_214063g0010 No alias transcription factor (DREB) 0.03 Archaeplastida
MA_4032g0010 No alias transcription factor (ERF) 0.02 Archaeplastida
MA_4182g0010 No alias no hits & (original description: none) 0.03 Archaeplastida
MA_78784g0010 No alias transcription factor (ERF) 0.02 Archaeplastida
MA_844983g0010 No alias no hits & (original description: none) 0.02 Archaeplastida
MA_924346g0010 No alias transcription factor (DREB) 0.03 Archaeplastida
MA_9304g0020 No alias transcription factor (ERF) 0.03 Archaeplastida
MA_9812198g0010 No alias no hits & (original description: none) 0.04 Archaeplastida
MA_9905g0010 No alias transcription factor (ERF) 0.03 Archaeplastida
Mp1g20040.1 No alias transcription factor (ERF) 0.02 Archaeplastida
Mp7g13760.1 No alias transcription factor (DREB) 0.02 Archaeplastida
Pp3c11_10660V3.1 No alias Integrase-type DNA-binding superfamily protein 0.02 Archaeplastida
Pp3c11_24520V3.1 No alias Integrase-type DNA-binding superfamily protein 0.03 Archaeplastida
Pp3c23_21450V3.1 No alias Integrase-type DNA-binding superfamily protein 0.04 Archaeplastida
Pp3c26_14710V3.1 No alias ethylene responsive element binding factor 1 0.03 Archaeplastida
Pp3c26_1890V3.1 No alias erf domain protein 9 0.03 Archaeplastida
Pp3c6_20480V3.1 No alias Integrase-type DNA-binding superfamily protein 0.02 Archaeplastida
Pp3c9_2020V3.1 No alias erf domain protein 9 0.04 Archaeplastida
Solyc01g009440.3.1 No alias transcription factor (DREB) 0.03 Archaeplastida
Solyc01g057080.1.1 No alias transcription factor (DREB) 0.03 Archaeplastida
Solyc02g090800.1.1 No alias transcription factor (ERF) 0.05 Archaeplastida
Solyc03g114440.1.1 No alias transcription factor (ERF). transcription factor (ERN1) 0.04 Archaeplastida
Solyc03g118190.4.1 No alias transcription factor (ERF) 0.04 Archaeplastida
Solyc04g012050.3.1 No alias transcription factor (ERF) 0.03 Archaeplastida
Solyc04g051360.3.1 No alias transcription factor (ERF) 0.05 Archaeplastida
Solyc05g050790.3.1 No alias transcription factor (ERF) 0.03 Archaeplastida
Solyc06g035700.1.1 No alias transcription factor (DREB) 0.03 Archaeplastida
Solyc08g066660.1.1 No alias transcription factor (DREB) 0.04 Archaeplastida
Solyc08g078170.1.1 No alias transcription factor (ERF) 0.04 Archaeplastida
Solyc09g091950.1.1 No alias transcription factor (DREB) 0.03 Archaeplastida
Solyc10g050960.3.1 No alias transcription factor (ERF) 0.02 Archaeplastida
Solyc11g012980.1.1 No alias Ethylene-responsive transcription factor ERF012... 0.03 Archaeplastida
Solyc11g042560.1.1 No alias transcription factor (DREB) 0.03 Archaeplastida
Solyc12g042210.2.1 No alias transcription factor (ERF) 0.1 Archaeplastida
Solyc12g056980.1.1 No alias transcription factor (DREB) 0.03 Archaeplastida
Zm00001e001139_P001 No alias Ethylene-responsive transcription factor ERF014... 0.04 Archaeplastida
Zm00001e003800_P001 No alias transcription factor (ERF) 0.02 Archaeplastida
Zm00001e006604_P001 No alias transcription factor (ERF) 0.03 Archaeplastida
Zm00001e006982_P001 No alias no hits & (original description: none) 0.02 Archaeplastida
Zm00001e007205_P001 No alias Dehydration-responsive element-binding protein 1E... 0.02 Archaeplastida
Zm00001e009947_P001 No alias transcription factor (ERF) 0.02 Archaeplastida
Zm00001e013685_P001 No alias no hits & (original description: none) 0.03 Archaeplastida
Zm00001e014413_P001 No alias transcription factor (DREB) 0.04 Archaeplastida
Zm00001e014659_P001 No alias no hits & (original description: none) 0.03 Archaeplastida
Zm00001e015312_P001 No alias transcription factor (ERF) 0.04 Archaeplastida
Zm00001e015327_P001 No alias transcription factor (DREB) 0.04 Archaeplastida
Zm00001e019026_P001 No alias transcription factor (ERF) 0.02 Archaeplastida
Zm00001e019567_P001 No alias transcription factor (ERF) 0.03 Archaeplastida
Zm00001e021579_P001 No alias Pathogenesis-related genes transcriptional activator... 0.02 Archaeplastida
Zm00001e023224_P001 No alias transcription factor (DREB) 0.06 Archaeplastida
Zm00001e024669_P001 No alias transcription factor (ERF) 0.05 Archaeplastida
Zm00001e027351_P001 No alias transcription factor (ERF) 0.02 Archaeplastida
Zm00001e028920_P001 No alias transcription factor (ERF) 0.04 Archaeplastida
Zm00001e032033_P001 No alias transcription factor (ERF) 0.02 Archaeplastida
Zm00001e033537_P001 No alias transcription factor (ERF) 0.03 Archaeplastida
Zm00001e034242_P001 No alias transcription factor (ERF) 0.03 Archaeplastida
Zm00001e038819_P001 No alias transcription factor (DREB) 0.04 Archaeplastida
Zm00001e038888_P001 No alias transcription factor (DREB) 0.02 Archaeplastida
Zm00001e040033_P001 No alias No annotation 0.02 Archaeplastida
Zm00001e041288_P001 No alias transcription factor (DREB) 0.02 Archaeplastida
Zm00001e041620_P002 No alias transcription factor (ERF) 0.03 Archaeplastida

Type GO Term Name Evidence Source
MF GO:0003677 DNA binding ISS Interproscan
MF GO:0003700 DNA-binding transcription factor activity ISS Interproscan
CC GO:0005634 nucleus ISS Interproscan
CC GO:0005634 nucleus ISM Interproscan
BP GO:0006355 regulation of transcription, DNA-templated ISS Interproscan
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Type GO Term Name Evidence Source
MF GO:0003846 2-acylglycerol O-acyltransferase activity IEP Neighborhood
MF GO:0003954 NADH dehydrogenase activity IEP Neighborhood
MF GO:0004620 phospholipase activity IEP Neighborhood
MF GO:0004622 lysophospholipase activity IEP Neighborhood
CC GO:0005747 mitochondrial respiratory chain complex I IEP Neighborhood
MF GO:0008137 NADH dehydrogenase (ubiquinone) activity IEP Neighborhood
MF GO:0008374 O-acyltransferase activity IEP Neighborhood
BP GO:0009718 anthocyanin-containing compound biosynthetic process IEP Neighborhood
BP GO:0009834 plant-type secondary cell wall biogenesis IEP Neighborhood
BP GO:0009891 positive regulation of biosynthetic process IEP Neighborhood
BP GO:0009893 positive regulation of metabolic process IEP Neighborhood
BP GO:0010016 shoot system morphogenesis IEP Neighborhood
BP GO:0010043 response to zinc ion IEP Neighborhood
BP GO:0010073 meristem maintenance IEP Neighborhood
BP GO:0010557 positive regulation of macromolecule biosynthetic process IEP Neighborhood
BP GO:0010604 positive regulation of macromolecule metabolic process IEP Neighborhood
BP GO:0010628 positive regulation of gene expression IEP Neighborhood
BP GO:0015980 energy derivation by oxidation of organic compounds IEP Neighborhood
MF GO:0016411 acylglycerol O-acyltransferase activity IEP Neighborhood
MF GO:0016651 oxidoreductase activity, acting on NAD(P)H IEP Neighborhood
MF GO:0016655 oxidoreductase activity, acting on NAD(P)H, quinone or similar compound as acceptor IEP Neighborhood
CC GO:0030964 NADH dehydrogenase complex IEP Neighborhood
BP GO:0031325 positive regulation of cellular metabolic process IEP Neighborhood
BP GO:0031328 positive regulation of cellular biosynthetic process IEP Neighborhood
BP GO:0044087 regulation of cellular component biogenesis IEP Neighborhood
CC GO:0045271 respiratory chain complex I IEP Neighborhood
BP GO:0045333 cellular respiration IEP Neighborhood
BP GO:0045893 positive regulation of transcription, DNA-templated IEP Neighborhood
BP GO:0045935 positive regulation of nucleobase-containing compound metabolic process IEP Neighborhood
BP GO:0046283 anthocyanin-containing compound metabolic process IEP Neighborhood
BP GO:0046677 response to antibiotic IEP Neighborhood
BP GO:0048439 flower morphogenesis IEP Neighborhood
MF GO:0050136 NADH dehydrogenase (quinone) activity IEP Neighborhood
BP GO:0051173 positive regulation of nitrogen compound metabolic process IEP Neighborhood
BP GO:0051254 positive regulation of RNA metabolic process IEP Neighborhood
BP GO:1901348 positive regulation of secondary cell wall biogenesis IEP Neighborhood
BP GO:1902680 positive regulation of RNA biosynthetic process IEP Neighborhood
BP GO:1903338 regulation of cell wall organization or biogenesis IEP Neighborhood
BP GO:1903340 positive regulation of cell wall organization or biogenesis IEP Neighborhood
BP GO:1903508 positive regulation of nucleic acid-templated transcription IEP Neighborhood
BP GO:2000652 regulation of secondary cell wall biogenesis IEP Neighborhood
InterPro domains Description Start Stop
IPR001471 AP2/ERF_dom 59 109
No external refs found!