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  5. Zm00001e011263_P001

Zm00001e011263_P001


Description : Protein Rf1, mitochondrial OS=Oryza sativa subsp. indica (sp|q76c99|rf1_orysi : 720.0)


Gene families : OG0001482 (Archaeplastida) Phylogenetic Tree(s): OG0001482_tree ,
OG_05_0000870 (LandPlants) Phylogenetic Tree(s): OG_05_0000870_tree ,
OG_06_0000537 (SeedPlants) Phylogenetic Tree(s): OG_06_0000537_tree

Sequence : coding (download), protein (download)


Attention: This gene has low abundance.


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Zm00001e011263_P001
Cluster HCCA: Cluster_180

Target Alias Description ECC score Gene Family Method Actions
LOC_Os08g01640.1 No alias Protein Rf1, mitochondrial OS=Oryza sativa subsp. indica... 0.02 Archaeplastida
LOC_Os08g01650.1 No alias Protein Rf1, mitochondrial OS=Oryza sativa subsp. indica... 0.02 Archaeplastida
LOC_Os08g15000.1 No alias Protein Rf1, mitochondrial OS=Oryza sativa subsp. indica... 0.02 Archaeplastida
LOC_Os10g35436.1 No alias Protein Rf1, mitochondrial OS=Oryza sativa subsp. indica... 0.02 Archaeplastida
LOC_Os10g35440.1 No alias Protein Rf1, mitochondrial OS=Oryza sativa subsp. indica... 0.02 Archaeplastida
Smo51561 No alias Protein Rf1, mitochondrial OS=Oryza sativa subsp. indica 0.02 Archaeplastida
Zm00001e011267_P001 No alias Protein Rf1, mitochondrial OS=Oryza sativa subsp. indica... 0.14 Archaeplastida
Zm00001e026658_P003 No alias Protein Rf1, mitochondrial OS=Oryza sativa subsp. indica... 0.17 Archaeplastida
Zm00001e026660_P001 No alias Protein Rf1, mitochondrial OS=Oryza sativa subsp. indica... 0.11 Archaeplastida

Type GO Term Name Evidence Source

No GO annotation available for this sequence
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Type GO Term Name Evidence Source

No Predicted GO terms available for this sequence
InterPro domains Description Start Stop
IPR002885 Pentatricopeptide_repeat 676 722
IPR002885 Pentatricopeptide_repeat 290 339
IPR002885 Pentatricopeptide_repeat 220 269
IPR002885 Pentatricopeptide_repeat 430 479
IPR002885 Pentatricopeptide_repeat 535 584
IPR002885 Pentatricopeptide_repeat 605 654
IPR002885 Pentatricopeptide_repeat 148 197
IPR002885 Pentatricopeptide_repeat 360 409
IPR002885 Pentatricopeptide_repeat 116 144
IPR002885 Pentatricopeptide_repeat 504 526
No external refs found!