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  5. Zm00001e011516_P001

Zm00001e011516_P001


Description : transcription factor (TCP)


Gene families : OG0000332 (Archaeplastida) Phylogenetic Tree(s): OG0000332_tree ,
OG_05_0000167 (LandPlants) Phylogenetic Tree(s): OG_05_0000167_tree ,
OG_06_0000105 (SeedPlants) Phylogenetic Tree(s): OG_06_0000105_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Zm00001e011516_P001
Cluster HCCA: Cluster_266

Target Alias Description ECC score Gene Family Method Actions
AMTR_s00007p00041830 evm_27.TU.AmTr_v1... RNA biosynthesis.transcriptional activation.TCP... 0.03 Archaeplastida
AMTR_s00021p00158020 evm_27.TU.AmTr_v1... RNA biosynthesis.transcriptional activation.TCP... 0.03 Archaeplastida
AMTR_s00154p00072430 evm_27.TU.AmTr_v1... RNA biosynthesis.transcriptional activation.TCP... 0.03 Archaeplastida
AT1G30210 ATTCP24, TCP24 TEOSINTE BRANCHED 1, cycloidea, and PCF family 24 0.03 Archaeplastida
AT2G31070 TCP10 TCP domain protein 10 0.04 Archaeplastida
AT3G15030 TCP4, MEE35 TCP family transcription factor 4 0.04 Archaeplastida
AT4G18390 TCP2 TEOSINTE BRANCHED 1, cycloidea and PCF transcription factor 2 0.03 Archaeplastida
AT5G60970 TCP5 TEOSINTE BRANCHED 1, cycloidea and PCF transcription factor 5 0.09 Archaeplastida
GSVIVT01008234001 No alias RNA biosynthesis.transcriptional activation.TCP... 0.07 Archaeplastida
GSVIVT01011962001 No alias RNA biosynthesis.transcriptional activation.TCP... 0.03 Archaeplastida
GSVIVT01014236001 No alias RNA biosynthesis.transcriptional activation.TCP... 0.04 Archaeplastida
GSVIVT01036449001 No alias RNA biosynthesis.transcriptional activation.TCP... 0.03 Archaeplastida
LOC_Os01g11550.1 No alias transcription factor (TCP) 0.06 Archaeplastida
LOC_Os01g55750.1 No alias transcription factor (TCP) 0.04 Archaeplastida
LOC_Os05g43760.1 No alias transcription factor (TCP) 0.06 Archaeplastida
LOC_Os07g05720.1 No alias transcription factor (TCP) 0.04 Archaeplastida
MA_189502g0010 No alias transcription factor (TCP) 0.03 Archaeplastida
Solyc04g006980.1.1 No alias transcription factor (TCP) 0.04 Archaeplastida
Solyc05g009900.3.1 No alias transcription factor (TCP) 0.03 Archaeplastida
Solyc06g069240.2.1 No alias transcription factor (TCP) 0.04 Archaeplastida
Solyc06g069460.3.1 No alias transcription factor (TCP) 0.05 Archaeplastida
Zm00001e009811_P001 No alias transcription factor (TCP) 0.08 Archaeplastida
Zm00001e012216_P001 No alias no hits & (original description: none) 0.03 Archaeplastida
Zm00001e022442_P001 No alias transcription factor (TCP) 0.03 Archaeplastida
Zm00001e027401_P002 No alias transcription factor (TCP) 0.05 Archaeplastida
Zm00001e034097_P001 No alias transcription factor (TCP) 0.08 Archaeplastida

Type GO Term Name Evidence Source

No GO annotation available for this sequence
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Type GO Term Name Evidence Source
MF GO:0003674 molecular_function IEP Neighborhood
MF GO:0005507 copper ion binding IEP Neighborhood
BP GO:0006631 fatty acid metabolic process IEP Neighborhood
BP GO:0006633 fatty acid biosynthetic process IEP Neighborhood
MF GO:0008270 zinc ion binding IEP Neighborhood
MF GO:0008289 lipid binding IEP Neighborhood
MF GO:0016746 transferase activity, transferring acyl groups IEP Neighborhood
MF GO:0016747 transferase activity, transferring acyl groups other than amino-acyl groups IEP Neighborhood
MF GO:0016788 hydrolase activity, acting on ester bonds IEP Neighborhood
MF GO:0043169 cation binding IEP Neighborhood
MF GO:0046872 metal ion binding IEP Neighborhood
MF GO:0046914 transition metal ion binding IEP Neighborhood
BP GO:0072330 monocarboxylic acid biosynthetic process IEP Neighborhood
InterPro domains Description Start Stop
IPR017887 TF_TCP_subgr 63 197
No external refs found!