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  5. AT1G13250

AT1G13250 (GATL3)


Aliases : GATL3

Description : galacturonosyltransferase-like 3


Gene families : OG0000616 (Archaeplastida) Phylogenetic Tree(s): OG0000616_tree ,
OG_05_0000491 (LandPlants) Phylogenetic Tree(s): OG_05_0000491_tree ,
OG_06_0000335 (SeedPlants) Phylogenetic Tree(s): OG_06_0000335_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: AT1G13250
Cluster HCCA: Cluster_180

Target Alias Description ECC score Gene Family Method Actions
AMTR_s00025p00136940 evm_27.TU.AmTr_v1... Cell wall.hemicellulose.xylan.synthesis.galacturonosyltransferase 0.04 Archaeplastida
AT1G24170 GATL8, LGT9 Nucleotide-diphospho-sugar transferases superfamily protein 0.05 Archaeplastida
GSVIVT01011066001 No alias Probable galacturonosyltransferase-like 4 OS=Arabidopsis thaliana 0.02 Archaeplastida
GSVIVT01017857001 No alias Probable galacturonosyltransferase-like 4 OS=Arabidopsis thaliana 0.03 Archaeplastida
GSVIVT01020141001 No alias Probable galacturonosyltransferase-like 9 OS=Arabidopsis thaliana 0.04 Archaeplastida
Gb_09765 No alias galacturonosyltransferase 0.03 Archaeplastida
Gb_37205 No alias galacturonosyltransferase 0.03 Archaeplastida
LOC_Os03g18890.1 No alias galacturonosyltransferase 0.05 Archaeplastida
LOC_Os06g13760.1 No alias galacturonosyltransferase 0.03 Archaeplastida
MA_130934g0010 No alias galacturonosyltransferase 0.02 Archaeplastida
Pp3c25_14930V3.1 No alias glucosyl transferase family 8 0.03 Archaeplastida
Pp3c2_18670V3.1 No alias galacturonosyltransferase-like 7 0.02 Archaeplastida
Smo234804 No alias Cell wall.hemicellulose.xylan.synthesis.galacturonosyltransferase 0.09 Archaeplastida
Solyc02g065530.4.1 No alias galacturonosyltransferase 0.05 Archaeplastida
Zm00001e001382_P001 No alias galacturonosyltransferase 0.04 Archaeplastida
Zm00001e007430_P001 No alias galacturonosyltransferase 0.06 Archaeplastida
Zm00001e035724_P001 No alias galacturonosyltransferase 0.02 Archaeplastida
Zm00001e041300_P001 No alias no hits & (original description: none) 0.04 Archaeplastida

Type GO Term Name Evidence Source
CC GO:0005794 Golgi apparatus IDA Interproscan
CC GO:0005794 Golgi apparatus ISM Interproscan
BP GO:0016051 carbohydrate biosynthetic process ISS Interproscan
MF GO:0016757 transferase activity, transferring glycosyl groups ISS Interproscan
MF GO:0016758 transferase activity, transferring hexosyl groups ISS Interproscan
MF GO:0047262 polygalacturonate 4-alpha-galacturonosyltransferase activity ISS Interproscan
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Type GO Term Name Evidence Source
BP GO:0000096 sulfur amino acid metabolic process IEP Neighborhood
BP GO:0000097 sulfur amino acid biosynthetic process IEP Neighborhood
MF GO:0001871 pattern binding IEP Neighborhood
MF GO:0003865 3-oxo-5-alpha-steroid 4-dehydrogenase activity IEP Neighborhood
MF GO:0004180 carboxypeptidase activity IEP Neighborhood
MF GO:0004185 serine-type carboxypeptidase activity IEP Neighborhood
MF GO:0004312 fatty acid synthase activity IEP Neighborhood
MF GO:0005085 guanyl-nucleotide exchange factor activity IEP Neighborhood
MF GO:0005088 Ras guanyl-nucleotide exchange factor activity IEP Neighborhood
MF GO:0005089 Rho guanyl-nucleotide exchange factor activity IEP Neighborhood
MF GO:0005199 structural constituent of cell wall IEP Neighborhood
CC GO:0005576 extracellular region IEP Neighborhood
CC GO:0005789 endoplasmic reticulum membrane IEP Neighborhood
BP GO:0006665 sphingolipid metabolic process IEP Neighborhood
BP GO:0006694 steroid biosynthetic process IEP Neighborhood
BP GO:0006816 calcium ion transport IEP Neighborhood
BP GO:0006970 response to osmotic stress IEP Neighborhood
BP GO:0007030 Golgi organization IEP Neighborhood
BP GO:0007389 pattern specification process IEP Neighborhood
BP GO:0008202 steroid metabolic process IEP Neighborhood
MF GO:0008238 exopeptidase activity IEP Neighborhood
BP GO:0008356 asymmetric cell division IEP Neighborhood
BP GO:0008361 regulation of cell size IEP Neighborhood
BP GO:0008652 cellular amino acid biosynthetic process IEP Neighborhood
BP GO:0009651 response to salt stress IEP Neighborhood
BP GO:0009825 multidimensional cell growth IEP Neighborhood
CC GO:0009897 external side of plasma membrane IEP Neighborhood
BP GO:0009914 hormone transport IEP Neighborhood
MF GO:0009922 fatty acid elongase activity IEP Neighborhood
CC GO:0009923 fatty acid elongase complex IEP Neighborhood
BP GO:0009926 auxin polar transport IEP Neighborhood
BP GO:0010015 root morphogenesis IEP Neighborhood
BP GO:0010025 wax biosynthetic process IEP Neighborhood
BP GO:0010166 wax metabolic process IEP Neighborhood
BP GO:0010769 regulation of cell morphogenesis involved in differentiation IEP Neighborhood
BP GO:0016125 sterol metabolic process IEP Neighborhood
BP GO:0016126 sterol biosynthetic process IEP Neighborhood
MF GO:0016229 steroid dehydrogenase activity IEP Neighborhood
CC GO:0016324 apical plasma membrane IEP Neighborhood
MF GO:0016627 oxidoreductase activity, acting on the CH-CH group of donors IEP Neighborhood
MF GO:0016628 oxidoreductase activity, acting on the CH-CH group of donors, NAD or NADP as acceptor IEP Neighborhood
MF GO:0017016 Ras GTPase binding IEP Neighborhood
MF GO:0017048 Rho GTPase binding IEP Neighborhood
MF GO:0019166 trans-2-enoyl-CoA reductase (NADPH) activity IEP Neighborhood
BP GO:0030001 metal ion transport IEP Neighborhood
BP GO:0030148 sphingolipid biosynthetic process IEP Neighborhood
MF GO:0030247 polysaccharide binding IEP Neighborhood
CC GO:0031224 intrinsic component of membrane IEP Neighborhood
CC GO:0031225 anchored component of membrane IEP Neighborhood
CC GO:0031226 intrinsic component of plasma membrane IEP Neighborhood
MF GO:0031267 small GTPase binding IEP Neighborhood
BP GO:0032535 regulation of cellular component size IEP Neighborhood
MF GO:0033765 steroid dehydrogenase activity, acting on the CH-CH group of donors IEP Neighborhood
BP GO:0040007 growth IEP Neighborhood
BP GO:0042546 cell wall biogenesis IEP Neighborhood
BP GO:0044085 cellular component biogenesis IEP Neighborhood
BP GO:0044272 sulfur compound biosynthetic process IEP Neighborhood
CC GO:0044425 membrane part IEP Neighborhood
CC GO:0044432 endoplasmic reticulum part IEP Neighborhood
CC GO:0044459 plasma membrane part IEP Neighborhood
BP GO:0045229 external encapsulating structure organization IEP Neighborhood
BP GO:0045595 regulation of cell differentiation IEP Neighborhood
BP GO:0046519 sphingoid metabolic process IEP Neighborhood
BP GO:0046520 sphingoid biosynthetic process IEP Neighborhood
CC GO:0046658 anchored component of plasma membrane IEP Neighborhood
MF GO:0051020 GTPase binding IEP Neighborhood
BP GO:0060284 regulation of cell development IEP Neighborhood
BP GO:0060918 auxin transport IEP Neighborhood
MF GO:0070008 serine-type exopeptidase activity IEP Neighborhood
BP GO:0070838 divalent metal ion transport IEP Neighborhood
BP GO:0071554 cell wall organization or biogenesis IEP Neighborhood
BP GO:0071555 cell wall organization IEP Neighborhood
BP GO:0072511 divalent inorganic cation transport IEP Neighborhood
BP GO:0080092 regulation of pollen tube growth IEP Neighborhood
BP GO:0090066 regulation of anatomical structure size IEP Neighborhood
BP GO:0097164 ammonium ion metabolic process IEP Neighborhood
CC GO:0098552 side of membrane IEP Neighborhood
CC GO:0098590 plasma membrane region IEP Neighborhood
MF GO:0140096 catalytic activity, acting on a protein IEP Neighborhood
BP GO:1901568 fatty acid derivative metabolic process IEP Neighborhood
BP GO:1901570 fatty acid derivative biosynthetic process IEP Neighborhood
BP GO:1901605 alpha-amino acid metabolic process IEP Neighborhood
BP GO:1901607 alpha-amino acid biosynthetic process IEP Neighborhood
BP GO:1901617 organic hydroxy compound biosynthetic process IEP Neighborhood
BP GO:1905392 plant organ morphogenesis IEP Neighborhood
InterPro domains Description Start Stop
IPR002495 Glyco_trans_8 61 317
No external refs found!