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  5. AT3G17480

AT3G17480


Description : F-box and associated interaction domains-containing protein


Gene families : OG0000467 (Archaeplastida) Phylogenetic Tree(s): OG0000467_tree ,
OG_05_0000234 (LandPlants) Phylogenetic Tree(s): OG_05_0000234_tree ,
OG_06_0000102 (SeedPlants) Phylogenetic Tree(s): OG_06_0000102_tree

Sequence : coding (download), protein (download)


Attention: This gene has low abundance.


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: AT3G17480
Cluster HCCA: Cluster_112

Target Alias Description ECC score Gene Family Method Actions
AT1G11620 No alias F-box and associated interaction domains-containing protein 0.09 Archaeplastida
AT1G11810 No alias F-box associated ubiquitination effector family protein 0.09 Archaeplastida
AT1G27490 No alias F-box and associated interaction domains-containing protein 0.04 Archaeplastida
AT1G31510 No alias F-box associated ubiquitination effector family protein 0.04 Archaeplastida
AT1G32140 No alias F-box family protein 0.07 Archaeplastida
AT1G54550 No alias F-box and associated interaction domains-containing protein 0.07 Archaeplastida
AT1G59680 EDA1 F-box associated ubiquitination effector family protein 0.02 Archaeplastida
AT1G62270 No alias F-box and associated interaction domains-containing protein 0.09 Archaeplastida
AT1G65990 No alias type 2 peroxiredoxin-related / thiol specific... 0.04 Archaeplastida
AT1G66490 No alias F-box and associated interaction domains-containing protein 0.06 Archaeplastida
AT2G24510 No alias F-box associated ubiquitination effector family protein 0.06 Archaeplastida
AT2G33655 No alias F-box and associated interaction domains-containing protein 0.05 Archaeplastida
AT2G38590 No alias F-box and associated interaction domains-containing protein 0.08 Archaeplastida
AT2G39355 No alias No description available 0.02 Archaeplastida
AT3G03405 No alias F-box associated ubiquitination effector family protein 0.04 Archaeplastida
AT3G04250 No alias F-box associated ubiquitination effector family protein 0.02 Archaeplastida
AT3G13680 No alias F-box and associated interaction domains-containing protein 0.05 Archaeplastida
AT3G13830 No alias F-box and associated interaction domains-containing protein 0.1 Archaeplastida
AT3G16820 No alias F-box and associated interaction domains-containing protein 0.05 Archaeplastida
AT3G17265 No alias F-box and associated interaction domains-containing protein 0.03 Archaeplastida
AT3G17320 No alias F-box and associated interaction domains-containing protein 0.07 Archaeplastida
AT3G17500 No alias F-box family protein 0.08 Archaeplastida
AT3G17530 No alias F-box and associated interaction domains-containing protein 0.05 Archaeplastida
AT3G17540 No alias F-box and associated interaction domains-containing protein 0.06 Archaeplastida
AT3G17560 No alias F-box and associated interaction domains-containing protein 0.08 Archaeplastida
AT3G17570 No alias F-box and associated interaction domains-containing protein 0.06 Archaeplastida
AT3G18330 No alias F-box family protein 0.08 Archaeplastida
AT3G19470 No alias F-box and associated interaction domains-containing protein 0.05 Archaeplastida
AT3G19560 No alias F-box family protein 0.09 Archaeplastida
AT3G19880 No alias F-box and associated interaction domains-containing protein 0.04 Archaeplastida
AT3G19890 No alias F-box family protein 0.03 Archaeplastida
AT3G20030 No alias F-box and associated interaction domains-containing protein 0.1 Archaeplastida
AT3G20690 No alias F-box and associated interaction domains-containing protein 0.07 Archaeplastida
AT3G20710 No alias F-box family protein 0.05 Archaeplastida
AT3G21120 No alias F-box and associated interaction domains-containing protein 0.09 Archaeplastida
AT3G22350 No alias F-box and associated interaction domains-containing protein 0.08 Archaeplastida
AT3G22700 No alias F-box and associated interaction domains-containing protein 0.07 Archaeplastida
AT3G22710 No alias F-box family protein 0.02 Archaeplastida
AT3G22720 No alias F-box and associated interaction domains-containing protein 0.03 Archaeplastida
AT3G22730 No alias F-box and associated interaction domains-containing protein 0.08 Archaeplastida
AT3G22770 No alias F-box associated ubiquitination effector family protein 0.05 Archaeplastida
AT3G22870 No alias F-box and associated interaction domains-containing protein 0.05 Archaeplastida
AT3G22940 No alias F-box associated ubiquitination effector family protein 0.04 Archaeplastida
AT3G23680 No alias F-box associated ubiquitination effector family protein 0.03 Archaeplastida
AT3G24580 No alias F-box and associated interaction domains-containing protein 0.02 Archaeplastida
AT3G25090 No alias F-box associated ubiquitination effector family protein 0.06 Archaeplastida
AT3G49520 No alias F-box and associated interaction domains-containing protein 0.02 Archaeplastida
AT4G09870 No alias F-box and associated interaction domains-containing protein 0.08 Archaeplastida
AT4G10740 No alias F-box and associated interaction domains-containing protein 0.08 Archaeplastida
AT4G17200 No alias F-box and associated interaction domains-containing protein 0.04 Archaeplastida
AT4G33290 No alias F-box and associated interaction domains-containing protein 0.05 Archaeplastida
AT5G36730 No alias F-box and associated interaction domains-containing protein 0.07 Archaeplastida
AT5G36820 No alias F-box and associated interaction domains-containing protein 0.07 Archaeplastida
AT5G41490 No alias F-box associated ubiquitination effector family protein 0.09 Archaeplastida
AT5G41500 No alias F-box and associated interaction domains-containing protein 0.08 Archaeplastida
AT5G41510 No alias F-box and associated interaction domains-containing protein 0.09 Archaeplastida
AT5G47300 No alias F-box and associated interaction domains-containing protein 0.07 Archaeplastida
AT5G62830 No alias F-box associated ubiquitination effector family protein 0.05 Archaeplastida

Type GO Term Name Evidence Source
CC GO:0005737 cytoplasm ISM Interproscan
BP GO:0008150 biological_process ND Interproscan
Toggle parental
Type GO Term Name Evidence Source
CC GO:0000311 plastid large ribosomal subunit IEP Neighborhood
MF GO:0003883 CTP synthase activity IEP Neighborhood
MF GO:0004525 ribonuclease III activity IEP Neighborhood
MF GO:0004857 enzyme inhibitor activity IEP Neighborhood
CC GO:0005576 extracellular region IEP Neighborhood
BP GO:0010315 auxin efflux IEP Neighborhood
BP GO:0010541 acropetal auxin transport IEP Neighborhood
MF GO:0032296 double-stranded RNA-specific ribonuclease activity IEP Neighborhood
MF GO:0046910 pectinesterase inhibitor activity IEP Neighborhood
InterPro domains Description Start Stop
IPR001810 F-box_dom 7 51
IPR006527 F-box-assoc_dom_typ1 205 369
No external refs found!