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  5. Zm00001e012166_P001

Zm00001e012166_P001


Description : XPO2 nucleocytoplasmic export karyopherin


Gene families : OG0005144 (Archaeplastida) Phylogenetic Tree(s): OG0005144_tree ,
OG_05_0005667 (LandPlants) Phylogenetic Tree(s): OG_05_0005667_tree ,
OG_06_0007247 (SeedPlants) Phylogenetic Tree(s): OG_06_0007247_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Zm00001e012166_P001
Cluster HCCA: Cluster_261

Target Alias Description ECC score Gene Family Method Actions
AT2G46520 No alias cellular apoptosis susceptibility protein, putative /... 0.04 Archaeplastida
GSVIVT01027164001 No alias Protein translocation.nucleus.nucleocytoplasmic... 0.03 Archaeplastida
LOC_Os01g13430.1 No alias XPO2 nucleocytoplasmic export karyopherin 0.1 Archaeplastida
MA_10426006g0010 No alias XPO2 nucleocytoplasmic export karyopherin 0.02 Archaeplastida
Smo164894 No alias Protein translocation.nucleus.nucleocytoplasmic... 0.04 Archaeplastida

Type GO Term Name Evidence Source
MF GO:0005515 protein binding IEA Interproscan
BP GO:0006886 intracellular protein transport IEA Interproscan
MF GO:0008536 Ran GTPase binding IEA Interproscan
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Type GO Term Name Evidence Source
CC GO:0000796 condensin complex IEP Neighborhood
MF GO:0003676 nucleic acid binding IEP Neighborhood
MF GO:0003677 DNA binding IEP Neighborhood
MF GO:0003678 DNA helicase activity IEP Neighborhood
MF GO:0003690 double-stranded DNA binding IEP Neighborhood
MF GO:0003743 translation initiation factor activity IEP Neighborhood
MF GO:0004386 helicase activity IEP Neighborhood
CC GO:0005852 eukaryotic translation initiation factor 3 complex IEP Neighborhood
BP GO:0006139 nucleobase-containing compound metabolic process IEP Neighborhood
BP GO:0006323 DNA packaging IEP Neighborhood
BP GO:0006364 rRNA processing IEP Neighborhood
BP GO:0006396 RNA processing IEP Neighborhood
BP GO:0006725 cellular aromatic compound metabolic process IEP Neighborhood
BP GO:0007076 mitotic chromosome condensation IEP Neighborhood
MF GO:0008641 ubiquitin-like modifier activating enzyme activity IEP Neighborhood
BP GO:0016070 RNA metabolic process IEP Neighborhood
BP GO:0016072 rRNA metabolic process IEP Neighborhood
MF GO:0016624 oxidoreductase activity, acting on the aldehyde or oxo group of donors, disulfide as acceptor IEP Neighborhood
MF GO:0016874 ligase activity IEP Neighborhood
MF GO:0016877 ligase activity, forming carbon-sulfur bonds IEP Neighborhood
MF GO:0016903 oxidoreductase activity, acting on the aldehyde or oxo group of donors IEP Neighborhood
BP GO:0022402 cell cycle process IEP Neighborhood
CC GO:0030014 CCR4-NOT complex IEP Neighborhood
BP GO:0030261 chromosome condensation IEP Neighborhood
CC GO:0032991 protein-containing complex IEP Neighborhood
BP GO:0034641 cellular nitrogen compound metabolic process IEP Neighborhood
CC GO:0044424 intracellular part IEP Neighborhood
CC GO:0044444 cytoplasmic part IEP Neighborhood
CC GO:0044464 cell part IEP Neighborhood
BP GO:0046483 heterocycle metabolic process IEP Neighborhood
BP GO:0051276 chromosome organization IEP Neighborhood
BP GO:0071103 DNA conformation change IEP Neighborhood
BP GO:0090304 nucleic acid metabolic process IEP Neighborhood
BP GO:1901360 organic cyclic compound metabolic process IEP Neighborhood
BP GO:1903047 mitotic cell cycle process IEP Neighborhood
InterPro domains Description Start Stop
IPR013713 Cse1 165 527
IPR005043 CAS_CSE1_C 549 972
IPR001494 Importin-beta_N 29 106
No external refs found!