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  5. AT3G18260

AT3G18260


Description : Reticulon family protein


Gene families : OG0000225 (Archaeplastida) Phylogenetic Tree(s): OG0000225_tree ,
OG_05_0000137 (LandPlants) Phylogenetic Tree(s): OG_05_0000137_tree ,
OG_06_0000298 (SeedPlants) Phylogenetic Tree(s): OG_06_0000298_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: AT3G18260
Cluster HCCA: Cluster_128

Target Alias Description ECC score Gene Family Method Actions
AMTR_s00044p00221140 evm_27.TU.AmTr_v1... Reticulon-like protein B9 OS=Arabidopsis thaliana 0.06 Archaeplastida
AT4G23630 BTI1, RTNLB1 VIRB2-interacting protein 1 0.03 Archaeplastida
GSVIVT01008336001 No alias Reticulon-like protein B9 OS=Arabidopsis thaliana 0.27 Archaeplastida
GSVIVT01011845001 No alias Reticulon-like protein B9 OS=Arabidopsis thaliana 0.26 Archaeplastida
LOC_Os01g04640.1 No alias ER-associated protein (Reticulon) 0.08 Archaeplastida
LOC_Os01g12650.1 No alias ER-associated protein (Reticulon) 0.02 Archaeplastida
LOC_Os01g49660.1 No alias ER-associated protein (Reticulon) 0.08 Archaeplastida
LOC_Os05g24770.1 No alias ER-associated protein (Reticulon) 0.03 Archaeplastida
MA_654072g0010 No alias ER-associated protein (Reticulon) 0.1 Archaeplastida
Solyc03g119190.3.1 No alias ER-associated protein (Reticulon) 0.25 Archaeplastida
Solyc05g008890.3.1 No alias ER-associated protein (Reticulon) 0.24 Archaeplastida
Zm00001e012762_P001 No alias no hits & (original description: none) 0.05 Archaeplastida
Zm00001e028102_P001 No alias ER-associated protein (Reticulon) 0.06 Archaeplastida
Zm00001e032328_P001 No alias ER-associated protein (Reticulon) 0.18 Archaeplastida

Type GO Term Name Evidence Source
MF GO:0003674 molecular_function ND Interproscan
CC GO:0005739 mitochondrion ISM Interproscan
CC GO:0005783 endoplasmic reticulum ISS Interproscan
BP GO:0008150 biological_process ND Interproscan
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Type GO Term Name Evidence Source
BP GO:0001666 response to hypoxia IEP Neighborhood
MF GO:0004630 phospholipase D activity IEP Neighborhood
MF GO:0004816 asparagine-tRNA ligase activity IEP Neighborhood
BP GO:0005985 sucrose metabolic process IEP Neighborhood
BP GO:0005986 sucrose biosynthetic process IEP Neighborhood
BP GO:0006421 asparaginyl-tRNA aminoacylation IEP Neighborhood
BP GO:0006643 membrane lipid metabolic process IEP Neighborhood
BP GO:0006664 glycolipid metabolic process IEP Neighborhood
BP GO:0009247 glycolipid biosynthetic process IEP Neighborhood
BP GO:0009312 oligosaccharide biosynthetic process IEP Neighborhood
BP GO:0009408 response to heat IEP Neighborhood
BP GO:0009615 response to virus IEP Neighborhood
MF GO:0016157 sucrose synthase activity IEP Neighborhood
MF GO:0016688 L-ascorbate peroxidase activity IEP Neighborhood
BP GO:0019374 galactolipid metabolic process IEP Neighborhood
BP GO:0019375 galactolipid biosynthetic process IEP Neighborhood
CC GO:0031225 anchored component of membrane IEP Neighborhood
BP GO:0033037 polysaccharide localization IEP Neighborhood
MF GO:0035251 UDP-glucosyltransferase activity IEP Neighborhood
BP GO:0036293 response to decreased oxygen levels IEP Neighborhood
BP GO:0046351 disaccharide biosynthetic process IEP Neighborhood
BP GO:0046466 membrane lipid catabolic process IEP Neighborhood
BP GO:0046467 membrane lipid biosynthetic process IEP Neighborhood
MF GO:0046527 glucosyltransferase activity IEP Neighborhood
BP GO:0052545 callose localization IEP Neighborhood
BP GO:0070482 response to oxygen levels IEP Neighborhood
BP GO:0080165 callose deposition in phloem sieve plate IEP Neighborhood
BP GO:1903509 liposaccharide metabolic process IEP Neighborhood
InterPro domains Description Start Stop
IPR003388 Reticulon 39 194
No external refs found!