- Species
- Tools
- Expression Profiles
- Compare profiles
- Create heatmap
- Export expression levels
- Expression Specificity
- Compare specificities
- Find specific profiles
- Co-expression Networks
- Create custom network
- Find enriched clusters
- Search
Description : Probable calcium-binding protein CML29 OS=Oryza sativa subsp. japonica (sp|q5z676|cml29_orysj : 128.0)
Gene families : OG0013946 (Archaeplastida) Phylogenetic Tree(s): OG0013946_tree ,
OG_05_0013855 (LandPlants) Phylogenetic Tree(s): OG_05_0013855_tree ,
OG_06_0013748 (SeedPlants) Phylogenetic Tree(s): OG_06_0013748_tree
Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.
| Type | Description | Actions |
|---|---|---|
| Neighborhood | HRR: Zm00001e013091_P001 | |
| Cluster | HCCA: Cluster_150 |
| Target | Alias | Description | ECC score | Gene Family Method | Actions |
|---|---|---|---|---|---|
| AMTR_s00008p00068860 | evm_27.TU.AmTr_v1... | Probable calcium-binding protein CML29 OS=Oryza sativa... | 0.02 | Archaeplastida | |
| AMTR_s00008p00069660 | evm_27.TU.AmTr_v1... | No description available | 0.02 | Archaeplastida |
| Type | GO Term | Name | Evidence | Source |
|---|---|---|---|---|
| MF | GO:0005509 | calcium ion binding | IEA | Interproscan |
| Type | GO Term | Name | Evidence | Source |
|---|---|---|---|---|
| MF | GO:0005384 | manganese ion transmembrane transporter activity | IEP | Neighborhood |
| BP | GO:0006576 | cellular biogenic amine metabolic process | IEP | Neighborhood |
| BP | GO:0006873 | cellular ion homeostasis | IEP | Neighborhood |
| BP | GO:0006875 | cellular metal ion homeostasis | IEP | Neighborhood |
| BP | GO:0008033 | tRNA processing | IEP | Neighborhood |
| BP | GO:0009308 | amine metabolic process | IEP | Neighborhood |
| BP | GO:0009309 | amine biosynthetic process | IEP | Neighborhood |
| MF | GO:0016765 | transferase activity, transferring alkyl or aryl (other than methyl) groups | IEP | Neighborhood |
| BP | GO:0019725 | cellular homeostasis | IEP | Neighborhood |
| BP | GO:0030003 | cellular cation homeostasis | IEP | Neighborhood |
| BP | GO:0030026 | cellular manganese ion homeostasis | IEP | Neighborhood |
| MF | GO:0030410 | nicotianamine synthase activity | IEP | Neighborhood |
| BP | GO:0030417 | nicotianamine metabolic process | IEP | Neighborhood |
| BP | GO:0030418 | nicotianamine biosynthetic process | IEP | Neighborhood |
| BP | GO:0042401 | cellular biogenic amine biosynthetic process | IEP | Neighborhood |
| BP | GO:0042592 | homeostatic process | IEP | Neighborhood |
| BP | GO:0044106 | cellular amine metabolic process | IEP | Neighborhood |
| MF | GO:0046915 | transition metal ion transmembrane transporter activity | IEP | Neighborhood |
| BP | GO:0046916 | cellular transition metal ion homeostasis | IEP | Neighborhood |
| BP | GO:0048878 | chemical homeostasis | IEP | Neighborhood |
| BP | GO:0050801 | ion homeostasis | IEP | Neighborhood |
| MF | GO:0051287 | NAD binding | IEP | Neighborhood |
| BP | GO:0055065 | metal ion homeostasis | IEP | Neighborhood |
| BP | GO:0055071 | manganese ion homeostasis | IEP | Neighborhood |
| BP | GO:0055076 | transition metal ion homeostasis | IEP | Neighborhood |
| BP | GO:0055080 | cation homeostasis | IEP | Neighborhood |
| BP | GO:0055082 | cellular chemical homeostasis | IEP | Neighborhood |
| BP | GO:0072350 | tricarboxylic acid metabolic process | IEP | Neighborhood |
| BP | GO:0072351 | tricarboxylic acid biosynthetic process | IEP | Neighborhood |
| BP | GO:0098771 | inorganic ion homeostasis | IEP | Neighborhood |
| InterPro domains | Description | Start | Stop |
|---|---|---|---|
| IPR002048 | EF_hand_dom | 22 | 82 |
| No external refs found! |