Zm00001e013128_P001

Description : component psRPS2 of small ribosomal subunit proteome

Gene families : OG0002098 (Archaeplastida) Phylogenetic Tree(s): OG0002098_tree ,
OG_05_0001646 (LandPlants) Phylogenetic Tree(s): OG_05_0001646_tree ,
OG_06_0001309 (SeedPlants) Phylogenetic Tree(s): OG_06_0001309_tree

Sequence : coding (download), protein (download)

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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.

Type	Description	Actions
Neighborhood	HRR: Zm00001e013128_P001
Cluster	HCCA: Cluster_255

Target	Alias	Description	ECC score	Gene Family Method
AMTR_s00102p00108730	evm_27.TU.AmTr_v1...	30S ribosomal protein S2, chloroplastic OS=Amborella trichopoda	0.04	Archaeplastida
ATCG00160	RPS2	ribosomal protein S2	0.12	Archaeplastida
Gb_26286	No alias	ATP synthase subunit alpha, chloroplastic OS=Cycas...	0.07	Archaeplastida
LOC_Os02g24612.1	No alias	component psRPS2 of small ribosomal subunit proteome	0.17	Archaeplastida
LOC_Os10g38278.1	No alias	component psRPS2 of small ribosomal subunit proteome	0.17	Archaeplastida
Mp3g24030.1	No alias	30S ribosomal protein S2, chloroplastic OS=Marchantia...	0.06	Archaeplastida
Smo137779	No alias	Protein biosynthesis.organelle translation...	0.06	Archaeplastida
Solyc00g500051.1.1	No alias	component psRPS2 of small ribosomal subunit proteome	0.04	Archaeplastida
Solyc00g500134.1.1	No alias	component psRPS2 of small ribosomal subunit proteome	0.07	Archaeplastida
Solyc00g500204.1.1	No alias	component psRPS2 of small ribosomal subunit proteome	0.07	Archaeplastida
Solyc00g500291.1.1	No alias	component psRPS2 of small ribosomal subunit proteome	0.07	Archaeplastida
Solyc00g500320.1.1	No alias	component psRPS2 of small ribosomal subunit proteome	0.07	Archaeplastida
Solyc09g018555.1.1	No alias	30S ribosomal protein S2, chloroplastic OS=Nicotiana...	0.06	Archaeplastida
Solyc12g062630.1.1	No alias	30S ribosomal protein S2, chloroplastic OS=Solanum...	0.07	Archaeplastida

Type	GO Term	Name	Evidence	Source
MF	GO:0003674	molecular_function	None	Extended
MF	GO:0003735	structural constituent of ribosome	IEA	Interproscan
MF	GO:0005198	structural molecule activity	None	Extended
CC	GO:0005575	cellular_component	None	Extended
CC	GO:0005840	ribosome	IEA	Interproscan
BP	GO:0006412	translation	IEA	Interproscan
BP	GO:0006518	peptide metabolic process	None	Extended
BP	GO:0006807	nitrogen compound metabolic process	None	Extended
BP	GO:0008150	biological_process	None	Extended
BP	GO:0008152	metabolic process	None	Extended
BP	GO:0009058	biosynthetic process	None	Extended
BP	GO:0009059	macromolecule biosynthetic process	None	Extended
BP	GO:0009987	cellular process	None	Extended
BP	GO:0019538	protein metabolic process	None	Extended
CC	GO:0032991	protein-containing complex	None	Extended
BP	GO:0034641	cellular nitrogen compound metabolic process	None	Extended
BP	GO:0034645	cellular macromolecule biosynthetic process	None	Extended
BP	GO:0043043	peptide biosynthetic process	None	Extended
BP	GO:0043170	macromolecule metabolic process	None	Extended
CC	GO:0043226	organelle	None	Extended
CC	GO:0043228	non-membrane-bounded organelle	None	Extended
CC	GO:0043229	intracellular organelle	None	Extended
CC	GO:0043232	intracellular non-membrane-bounded organelle	None	Extended
BP	GO:0043603	cellular amide metabolic process	None	Extended
BP	GO:0043604	amide biosynthetic process	None	Extended
BP	GO:0044237	cellular metabolic process	None	Extended
BP	GO:0044238	primary metabolic process	None	Extended
BP	GO:0044249	cellular biosynthetic process	None	Extended
BP	GO:0044260	cellular macromolecule metabolic process	None	Extended
BP	GO:0044267	cellular protein metabolic process	None	Extended
BP	GO:0044271	cellular nitrogen compound biosynthetic process	None	Extended
CC	GO:0044424	intracellular part	None	Extended
CC	GO:0044444	cytoplasmic part	None	Extended
CC	GO:0044464	cell part	None	Extended
BP	GO:0071704	organic substance metabolic process	None	Extended
BP	GO:1901564	organonitrogen compound metabolic process	None	Extended
BP	GO:1901566	organonitrogen compound biosynthetic process	None	Extended
BP	GO:1901576	organic substance biosynthetic process	None	Extended
CC	GO:1990904	ribonucleoprotein complex	None	Extended

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Type	GO Term	Name	Evidence	Source
MF	GO:0003676	nucleic acid binding	IEP	Neighborhood
MF	GO:0003723	RNA binding	IEP	Neighborhood
MF	GO:0003899	DNA-directed 5'-3' RNA polymerase activity	IEP	Neighborhood
BP	GO:0015985	energy coupled proton transport, down electrochemical gradient	IEP	Neighborhood
BP	GO:0015986	ATP synthesis coupled proton transport	IEP	Neighborhood
MF	GO:0019843	rRNA binding	IEP	Neighborhood
MF	GO:0034062	5'-3' RNA polymerase activity	IEP	Neighborhood
BP	GO:0034654	nucleobase-containing compound biosynthetic process	IEP	Neighborhood
MF	GO:0048037	cofactor binding	IEP	Neighborhood
MF	GO:0051536	iron-sulfur cluster binding	IEP	Neighborhood
MF	GO:0051540	metal cluster binding	IEP	Neighborhood
BP	GO:0055114	oxidation-reduction process	IEP	Neighborhood
MF	GO:0097747	RNA polymerase activity	IEP	Neighborhood

InterPro domains	Description	Start	Stop
IPR001865	Ribosomal_S2	13	228

External Links

No external refs found!

Zm00001e013128_P001

Expression Profile

Co-expression Networks

Expression Context Conservation (ECC)

Functional Annotation