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  5. AT3G18950

AT3G18950


Description : Transducin/WD40 repeat-like superfamily protein


Gene families : OG0000380 (Archaeplastida) Phylogenetic Tree(s): OG0000380_tree ,
OG_05_0000225 (LandPlants) Phylogenetic Tree(s): OG_05_0000225_tree ,
OG_06_0000140 (SeedPlants) Phylogenetic Tree(s): OG_06_0000140_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: AT3G18950
Cluster HCCA: Cluster_50

Target Alias Description ECC score Gene Family Method Actions
AMTR_s00059p00197160 evm_27.TU.AmTr_v1... Protein JINGUBANG OS=Arabidopsis thaliana 0.03 Archaeplastida
AT1G24130 No alias Transducin/WD40 repeat-like superfamily protein 0.04 Archaeplastida
AT1G49450 No alias Transducin/WD40 repeat-like superfamily protein 0.04 Archaeplastida
AT3G50390 No alias Transducin/WD40 repeat-like superfamily protein 0.03 Archaeplastida
AT5G50120 No alias Transducin/WD40 repeat-like superfamily protein 0.05 Archaeplastida
GSVIVT01007589001 No alias Protein JINGUBANG OS=Arabidopsis thaliana 0.03 Archaeplastida
GSVIVT01007825001 No alias No description available 0.06 Archaeplastida
GSVIVT01031882001 No alias Protein JINGUBANG OS=Arabidopsis thaliana 0.06 Archaeplastida
GSVIVT01035639001 No alias Protein JINGUBANG OS=Arabidopsis thaliana 0.03 Archaeplastida
Gb_14478 No alias Protein JINGUBANG OS=Arabidopsis thaliana... 0.07 Archaeplastida
Gb_19215 No alias Protein JINGUBANG OS=Arabidopsis thaliana... 0.06 Archaeplastida
Gb_26404 No alias Protein JINGUBANG OS=Arabidopsis thaliana... 0.04 Archaeplastida
Gb_27340 No alias Protein JINGUBANG OS=Arabidopsis thaliana... 0.03 Archaeplastida
LOC_Os03g52870.1 No alias Protein JINGUBANG OS=Arabidopsis thaliana... 0.05 Archaeplastida
MA_10429180g0010 No alias Protein JINGUBANG OS=Arabidopsis thaliana... 0.03 Archaeplastida
MA_10431396g0020 No alias no hits & (original description: none) 0.03 Archaeplastida
MA_107471g0010 No alias Protein JINGUBANG OS=Arabidopsis thaliana... 0.03 Archaeplastida
MA_1936904g0010 No alias No annotation 0.03 Archaeplastida
MA_370291g0010 No alias Protein JINGUBANG OS=Arabidopsis thaliana... 0.04 Archaeplastida
MA_913477g0010 No alias Protein JINGUBANG OS=Arabidopsis thaliana... 0.03 Archaeplastida
Pp3c11_2770V3.1 No alias Transducin/WD40 repeat-like superfamily protein 0.03 Archaeplastida
Pp3c4_25840V3.1 No alias Transducin/WD40 repeat-like superfamily protein 0.02 Archaeplastida
Solyc01g068250.2.1 No alias Protein JINGUBANG OS=Arabidopsis thaliana... 0.07 Archaeplastida
Solyc01g109120.3.1 No alias Protein JINGUBANG OS=Arabidopsis thaliana... 0.04 Archaeplastida
Solyc03g111780.1.1 No alias Protein JINGUBANG OS=Arabidopsis thaliana... 0.03 Archaeplastida
Solyc04g005020.3.1 No alias Protein JINGUBANG OS=Arabidopsis thaliana... 0.04 Archaeplastida
Solyc05g006340.3.1 No alias Protein JINGUBANG OS=Arabidopsis thaliana... 0.03 Archaeplastida
Solyc12g044320.2.1 No alias Protein JINGUBANG OS=Arabidopsis thaliana... 0.03 Archaeplastida
Zm00001e007790_P001 No alias Protein JINGUBANG OS=Arabidopsis thaliana... 0.03 Archaeplastida
Zm00001e015781_P001 No alias Protein JINGUBANG OS=Arabidopsis thaliana... 0.03 Archaeplastida
Zm00001e041085_P001 No alias Protein JINGUBANG OS=Arabidopsis thaliana... 0.05 Archaeplastida

Type GO Term Name Evidence Source
MF GO:0000166 nucleotide binding ISS Interproscan
BP GO:0008150 biological_process ND Interproscan
CC GO:0009507 chloroplast ISM Interproscan
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Type GO Term Name Evidence Source
BP GO:0000160 phosphorelay signal transduction system IEP Neighborhood
MF GO:0001067 regulatory region nucleic acid binding IEP Neighborhood
BP GO:0001101 response to acid chemical IEP Neighborhood
BP GO:0002252 immune effector process IEP Neighborhood
BP GO:0002679 respiratory burst involved in defense response IEP Neighborhood
MF GO:0003676 nucleic acid binding IEP Neighborhood
MF GO:0003677 DNA binding IEP Neighborhood
MF GO:0003700 DNA-binding transcription factor activity IEP Neighborhood
MF GO:0003824 catalytic activity IEP Neighborhood
MF GO:0004620 phospholipase activity IEP Neighborhood
MF GO:0004629 phospholipase C activity IEP Neighborhood
MF GO:0005516 calmodulin binding IEP Neighborhood
CC GO:0005886 plasma membrane IEP Neighborhood
BP GO:0006355 regulation of transcription, DNA-templated IEP Neighborhood
BP GO:0006820 anion transport IEP Neighborhood
BP GO:0006865 amino acid transport IEP Neighborhood
BP GO:0007165 signal transduction IEP Neighborhood
BP GO:0008300 isoprenoid catabolic process IEP Neighborhood
BP GO:0009605 response to external stimulus IEP Neighborhood
BP GO:0009620 response to fungus IEP Neighborhood
BP GO:0009645 response to low light intensity stimulus IEP Neighborhood
BP GO:0009719 response to endogenous stimulus IEP Neighborhood
BP GO:0009725 response to hormone IEP Neighborhood
BP GO:0009737 response to abscisic acid IEP Neighborhood
BP GO:0009738 abscisic acid-activated signaling pathway IEP Neighborhood
BP GO:0009755 hormone-mediated signaling pathway IEP Neighborhood
BP GO:0009785 blue light signaling pathway IEP Neighborhood
BP GO:0009873 ethylene-activated signaling pathway IEP Neighborhood
BP GO:0009889 regulation of biosynthetic process IEP Neighborhood
MF GO:0009975 cyclase activity IEP Neighborhood
BP GO:0010033 response to organic substance IEP Neighborhood
BP GO:0010036 response to boron-containing substance IEP Neighborhood
BP GO:0010200 response to chitin IEP Neighborhood
BP GO:0010243 response to organonitrogen compound IEP Neighborhood
BP GO:0010244 response to low fluence blue light stimulus by blue low-fluence system IEP Neighborhood
BP GO:0010468 regulation of gene expression IEP Neighborhood
BP GO:0010556 regulation of macromolecule biosynthetic process IEP Neighborhood
BP GO:0015711 organic anion transport IEP Neighborhood
BP GO:0015849 organic acid transport IEP Neighborhood
CC GO:0016020 membrane IEP Neighborhood
BP GO:0016103 diterpenoid catabolic process IEP Neighborhood
BP GO:0016115 terpenoid catabolic process IEP Neighborhood
MF GO:0016289 CoA hydrolase activity IEP Neighborhood
MF GO:0016298 lipase activity IEP Neighborhood
MF GO:0016301 kinase activity IEP Neighborhood
MF GO:0016788 hydrolase activity, acting on ester bonds IEP Neighborhood
MF GO:0016790 thiolester hydrolase activity IEP Neighborhood
BP GO:0019219 regulation of nucleobase-containing compound metabolic process IEP Neighborhood
BP GO:0019222 regulation of metabolic process IEP Neighborhood
BP GO:0030522 intracellular receptor signaling pathway IEP Neighborhood
MF GO:0030551 cyclic nucleotide binding IEP Neighborhood
BP GO:0031323 regulation of cellular metabolic process IEP Neighborhood
BP GO:0031326 regulation of cellular biosynthetic process IEP Neighborhood
MF GO:0033612 receptor serine/threonine kinase binding IEP Neighborhood
BP GO:0033993 response to lipid IEP Neighborhood
BP GO:0035556 intracellular signal transduction IEP Neighborhood
BP GO:0042221 response to chemical IEP Neighborhood
BP GO:0042445 hormone metabolic process IEP Neighborhood
BP GO:0042447 hormone catabolic process IEP Neighborhood
BP GO:0042493 response to drug IEP Neighborhood
BP GO:0043069 negative regulation of programmed cell death IEP Neighborhood
MF GO:0044212 transcription regulatory region DNA binding IEP Neighborhood
BP GO:0045487 gibberellin catabolic process IEP Neighborhood
MF GO:0045543 gibberellin 2-beta-dioxygenase activity IEP Neighborhood
BP GO:0045730 respiratory burst IEP Neighborhood
MF GO:0046423 allene-oxide cyclase activity IEP Neighborhood
BP GO:0046942 carboxylic acid transport IEP Neighborhood
MF GO:0047617 acyl-CoA hydrolase activity IEP Neighborhood
BP GO:0050789 regulation of biological process IEP Neighborhood
BP GO:0050794 regulation of cellular process IEP Neighborhood
BP GO:0050832 defense response to fungus IEP Neighborhood
BP GO:0051171 regulation of nitrogen compound metabolic process IEP Neighborhood
BP GO:0051252 regulation of RNA metabolic process IEP Neighborhood
BP GO:0051707 response to other organism IEP Neighborhood
BP GO:0051865 protein autoubiquitination IEP Neighborhood
BP GO:0052031 modulation by symbiont of host defense response IEP Neighborhood
BP GO:0052033 pathogen-associated molecular pattern dependent induction by symbiont of host innate immune response IEP Neighborhood
BP GO:0052166 positive regulation by symbiont of host innate immune response IEP Neighborhood
BP GO:0052167 modulation by symbiont of host innate immune response IEP Neighborhood
BP GO:0052169 pathogen-associated molecular pattern dependent modulation by symbiont of host innate immune response IEP Neighborhood
BP GO:0052173 response to defenses of other organism involved in symbiotic interaction IEP Neighborhood
BP GO:0052200 response to host defenses IEP Neighborhood
BP GO:0052255 modulation by organism of defense response of other organism involved in symbiotic interaction IEP Neighborhood
BP GO:0052257 pathogen-associated molecular pattern dependent induction by organism of innate immune response of other organism involved in symbiotic interaction IEP Neighborhood
BP GO:0052305 positive regulation by organism of innate immune response in other organism involved in symbiotic interaction IEP Neighborhood
BP GO:0052306 modulation by organism of innate immune response in other organism involved in symbiotic interaction IEP Neighborhood
BP GO:0052308 pathogen-associated molecular pattern dependent modulation by organism of innate immune response in other organism involved in symbiotic interaction IEP Neighborhood
BP GO:0052509 positive regulation by symbiont of host defense response IEP Neighborhood
BP GO:0052510 positive regulation by organism of defense response of other organism involved in symbiotic interaction IEP Neighborhood
BP GO:0052552 modulation by organism of immune response of other organism involved in symbiotic interaction IEP Neighborhood
BP GO:0052553 modulation by symbiont of host immune response IEP Neighborhood
BP GO:0052555 positive regulation by organism of immune response of other organism involved in symbiotic interaction IEP Neighborhood
BP GO:0052556 positive regulation by symbiont of host immune response IEP Neighborhood
BP GO:0052564 response to immune response of other organism involved in symbiotic interaction IEP Neighborhood
BP GO:0052572 response to host immune response IEP Neighborhood
MF GO:0052634 C-19 gibberellin 2-beta-dioxygenase activity IEP Neighborhood
BP GO:0060255 regulation of macromolecule metabolic process IEP Neighborhood
BP GO:0060548 negative regulation of cell death IEP Neighborhood
BP GO:0065007 biological regulation IEP Neighborhood
BP GO:0071483 cellular response to blue light IEP Neighborhood
BP GO:0071705 nitrogen compound transport IEP Neighborhood
BP GO:0075136 response to host IEP Neighborhood
BP GO:0080029 cellular response to boron-containing substance levels IEP Neighborhood
BP GO:0080090 regulation of primary metabolic process IEP Neighborhood
BP GO:0080169 cellular response to boron-containing substance deprivation IEP Neighborhood
BP GO:0097305 response to alcohol IEP Neighborhood
MF GO:0140110 transcription regulator activity IEP Neighborhood
BP GO:1901698 response to nitrogen compound IEP Neighborhood
BP GO:1901700 response to oxygen-containing compound IEP Neighborhood
BP GO:1903506 regulation of nucleic acid-templated transcription IEP Neighborhood
BP GO:2000112 regulation of cellular macromolecule biosynthetic process IEP Neighborhood
BP GO:2001141 regulation of RNA biosynthetic process IEP Neighborhood
InterPro domains Description Start Stop
IPR001680 WD40_repeat 375 406
IPR001680 WD40_repeat 248 276
IPR001680 WD40_repeat 416 462
IPR001680 WD40_repeat 138 164
IPR001680 WD40_repeat 282 318
No external refs found!