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  5. Zm00001e013933_P001

Zm00001e013933_P001


Description : lycopene beta cyclase (LCY-b)


Gene families : OG0004729 (Archaeplastida) Phylogenetic Tree(s): OG0004729_tree ,
OG_05_0005056 (LandPlants) Phylogenetic Tree(s): OG_05_0005056_tree ,
OG_06_0006980 (SeedPlants) Phylogenetic Tree(s): OG_06_0006980_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Zm00001e013933_P001
Cluster HCCA: Cluster_3

Target Alias Description ECC score Gene Family Method Actions
AT3G10230 LYC lycopene cyclase 0.05 Archaeplastida
Cre08.g358538 No alias Secondary metabolism.terpenoids.terpenoid... 0.04 Archaeplastida
LOC_Os02g09750.1 No alias lycopene beta cyclase (LCY-b) 0.1 Archaeplastida
Pp3c3_30970V3.1 No alias lycopene cyclase 0.02 Archaeplastida
Smo266613 No alias Secondary metabolism.terpenoids.terpenoid... 0.09 Archaeplastida
Solyc04g040190.1.1 No alias lycopene beta cyclase (LCY-b) 0.03 Archaeplastida

Type GO Term Name Evidence Source

No GO annotation available for this sequence
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Type GO Term Name Evidence Source
MF GO:0004089 carbonate dehydratase activity IEP Neighborhood
MF GO:0005506 iron ion binding IEP Neighborhood
BP GO:0006720 isoprenoid metabolic process IEP Neighborhood
BP GO:0008299 isoprenoid biosynthetic process IEP Neighborhood
MF GO:0008942 nitrite reductase [NAD(P)H] activity IEP Neighborhood
CC GO:0009521 photosystem IEP Neighborhood
CC GO:0009523 photosystem II IEP Neighborhood
CC GO:0009654 photosystem II oxygen evolving complex IEP Neighborhood
BP GO:0015979 photosynthesis IEP Neighborhood
MF GO:0016661 oxidoreductase activity, acting on other nitrogenous compounds as donors IEP Neighborhood
MF GO:0016836 hydro-lyase activity IEP Neighborhood
CC GO:0019898 extrinsic component of membrane IEP Neighborhood
CC GO:0044436 thylakoid part IEP Neighborhood
MF GO:0046857 oxidoreductase activity, acting on other nitrogenous compounds as donors, with NAD or NADP as acceptor IEP Neighborhood
MF GO:0048037 cofactor binding IEP Neighborhood
MF GO:0051536 iron-sulfur cluster binding IEP Neighborhood
MF GO:0051537 2 iron, 2 sulfur cluster binding IEP Neighborhood
MF GO:0051540 metal cluster binding IEP Neighborhood
BP GO:0055114 oxidation-reduction process IEP Neighborhood
CC GO:0098796 membrane protein complex IEP Neighborhood
MF GO:0098809 nitrite reductase activity IEP Neighborhood
CC GO:1902494 catalytic complex IEP Neighborhood
CC GO:1990204 oxidoreductase complex IEP Neighborhood

No InterPro domains available for this sequence

No external refs found!