Coexpression cluster: Cluster_3 (HCCA)

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Average Expression Profile

Enriched GO Terms (corrected p-value < 0.05) (download table)
ID Label % in cluster Enrichment log2 p-value Corrected p-value
GO:0051536 iron-sulfur cluster binding 2.74% (6/219) 3.94 3e-06 0.000456
GO:0051540 metal cluster binding 2.74% (6/219) 3.94 3e-06 0.000456
GO:0009654 photosystem II oxygen evolving complex 1.83% (4/219) 5.11 5e-06 0.000565
GO:1990204 oxidoreductase complex 1.83% (4/219) 4.92 9e-06 0.000723
GO:0009167 purine ribonucleoside monophosphate metabolic process 2.28% (5/219) 3.57 6.8e-05 0.000803
GO:0009141 nucleoside triphosphate metabolic process 2.28% (5/219) 3.57 6.8e-05 0.000803
GO:0009161 ribonucleoside monophosphate metabolic process 2.28% (5/219) 3.57 6.8e-05 0.000803
GO:0009123 nucleoside monophosphate metabolic process 2.28% (5/219) 3.57 6.8e-05 0.000803
GO:0009126 purine nucleoside monophosphate metabolic process 2.28% (5/219) 3.57 6.8e-05 0.000803
GO:0009199 ribonucleoside triphosphate metabolic process 2.28% (5/219) 3.64 5.3e-05 0.000879
GO:0009144 purine nucleoside triphosphate metabolic process 2.28% (5/219) 3.64 5.3e-05 0.000879
GO:0009205 purine ribonucleoside triphosphate metabolic process 2.28% (5/219) 3.64 5.3e-05 0.000879
GO:0009152 purine ribonucleotide biosynthetic process 2.28% (5/219) 3.59 6.4e-05 0.000921
GO:0046390 ribose phosphate biosynthetic process 2.28% (5/219) 3.59 6.4e-05 0.000921
GO:0009260 ribonucleotide biosynthetic process 2.28% (5/219) 3.59 6.4e-05 0.000921
GO:0006164 purine nucleotide biosynthetic process 2.28% (5/219) 3.52 8.1e-05 0.000925
GO:0046034 ATP metabolic process 2.28% (5/219) 3.66 5e-05 0.00097
GO:0009168 purine ribonucleoside monophosphate biosynthetic process 2.28% (5/219) 3.66 5e-05 0.00097
GO:0009127 purine nucleoside monophosphate biosynthetic process 2.28% (5/219) 3.66 5e-05 0.00097
GO:0009156 ribonucleoside monophosphate biosynthetic process 2.28% (5/219) 3.66 5e-05 0.00097
GO:0009124 nucleoside monophosphate biosynthetic process 2.28% (5/219) 3.66 5e-05 0.00097
GO:0009142 nucleoside triphosphate biosynthetic process 2.28% (5/219) 3.76 3.5e-05 0.000985
GO:0009201 ribonucleoside triphosphate biosynthetic process 2.28% (5/219) 3.76 3.5e-05 0.000985
GO:0006754 ATP biosynthetic process 2.28% (5/219) 3.76 3.5e-05 0.000985
GO:0009145 purine nucleoside triphosphate biosynthetic process 2.28% (5/219) 3.76 3.5e-05 0.000985
GO:0009206 purine ribonucleoside triphosphate biosynthetic process 2.28% (5/219) 3.76 3.5e-05 0.000985
GO:0072522 purine-containing compound biosynthetic process 2.28% (5/219) 3.48 9e-05 0.001001
GO:0016655 oxidoreductase activity, acting on NAD(P)H, quinone or similar compound as acceptor 1.37% (3/219) 5.83 1.7e-05 0.001121
GO:0009523 photosystem II 1.83% (4/219) 4.57 2.4e-05 0.001141
GO:0051537 2 iron, 2 sulfur cluster binding 1.37% (3/219) 5.69 2.3e-05 0.00128
GO:0009521 photosystem 1.83% (4/219) 3.95 0.000132 0.001416
GO:0009150 purine ribonucleotide metabolic process 2.28% (5/219) 3.32 0.000153 0.001541
GO:0009259 ribonucleotide metabolic process 2.28% (5/219) 3.32 0.000153 0.001541
GO:0044436 thylakoid part 1.83% (4/219) 3.84 0.000179 0.001704
GO:0006163 purine nucleotide metabolic process 2.28% (5/219) 3.26 0.000185 0.001714
GO:0034654 nucleobase-containing compound biosynthetic process 3.2% (7/219) 2.59 0.000178 0.001744
GO:0009165 nucleotide biosynthetic process 2.28% (5/219) 3.22 0.000213 0.001819
GO:1901293 nucleoside phosphate biosynthetic process 2.28% (5/219) 3.22 0.000213 0.001819
GO:0072521 purine-containing compound metabolic process 2.28% (5/219) 3.23 0.000204 0.001832
GO:0019693 ribose phosphate metabolic process 2.28% (5/219) 3.2 0.000223 0.001857
GO:0055114 oxidation-reduction process 7.31% (16/219) 1.48 0.00024 0.001905
GO:0016491 oxidoreductase activity 7.76% (17/219) 1.42 0.000239 0.001944
GO:0016651 oxidoreductase activity, acting on NAD(P)H 1.37% (3/219) 4.57 0.000269 0.002082
GO:1901137 carbohydrate derivative biosynthetic process 2.28% (5/219) 3.12 0.00029 0.002196
GO:0046933 proton-transporting ATP synthase activity, rotational mechanism 0.91% (2/219) 5.98 0.000409 0.002895
GO:0015986 ATP synthesis coupled proton transport 1.37% (3/219) 4.35 0.000428 0.002912
GO:0015985 energy coupled proton transport, down electrochemical gradient 1.37% (3/219) 4.35 0.000428 0.002912
GO:0015979 photosynthesis 1.83% (4/219) 3.55 0.000394 0.002918
GO:0098796 membrane protein complex 2.74% (6/219) 2.66 0.000405 0.002929
GO:0009117 nucleotide metabolic process 2.28% (5/219) 2.96 0.000487 0.003244
GO:0004332 fructose-bisphosphate aldolase activity 0.91% (2/219) 5.76 0.00057 0.00365
GO:0006753 nucleoside phosphate metabolic process 2.28% (5/219) 2.91 0.000564 0.003684
GO:0017144 drug metabolic process 2.28% (5/219) 2.81 0.000771 0.004668
GO:0019438 aromatic compound biosynthetic process 3.2% (7/219) 2.24 0.000771 0.004754
GO:0030163 protein catabolic process 0.91% (2/219) 5.57 0.000757 0.004759
GO:0018130 heterocycle biosynthetic process 3.2% (7/219) 2.23 0.000804 0.004778
GO:0016832 aldehyde-lyase activity 0.91% (2/219) 5.4 0.00097 0.005669
GO:0055086 nucleobase-containing small molecule metabolic process 2.28% (5/219) 2.71 0.001062 0.006097
GO:0090407 organophosphate biosynthetic process 2.28% (5/219) 2.67 0.001199 0.006765
GO:1901362 organic cyclic compound biosynthetic process 3.2% (7/219) 2.07 0.001544 0.008567
GO:0042625 ATPase coupled ion transmembrane transporter activity 0.91% (2/219) 4.98 0.001761 0.009161
GO:0022853 active ion transmembrane transporter activity 0.91% (2/219) 4.98 0.001761 0.009161
GO:0044769 ATPase activity, coupled to transmembrane movement of ions, rotational mechanism 0.91% (2/219) 4.98 0.001761 0.009161
GO:0019829 cation-transporting ATPase activity 0.91% (2/219) 4.98 0.001761 0.009161
GO:1901135 carbohydrate derivative metabolic process 2.28% (5/219) 2.46 0.00225 0.011526
GO:0006091 generation of precursor metabolites and energy 1.37% (3/219) 3.35 0.003254 0.016416
GO:0003755 peptidyl-prolyl cis-trans isomerase activity 1.37% (3/219) 3.27 0.003772 0.018471
GO:0016859 cis-trans isomerase activity 1.37% (3/219) 3.27 0.003772 0.018471
GO:0019898 extrinsic component of membrane 0.91% (2/219) 4.4 0.003997 0.019016
GO:0016667 oxidoreductase activity, acting on a sulfur group of donors 1.37% (3/219) 3.25 0.003955 0.019088
GO:0008942 nitrite reductase [NAD(P)H] activity 0.46% (1/219) 7.57 0.005267 0.022203
GO:0016661 oxidoreductase activity, acting on other nitrogenous compounds as donors 0.46% (1/219) 7.57 0.005267 0.022203
GO:0042651 thylakoid membrane 0.46% (1/219) 7.57 0.005267 0.022203
GO:0046857 oxidoreductase activity, acting on other nitrogenous compounds as donors, with NAD or NADP as acceptor 0.46% (1/219) 7.57 0.005267 0.022203
GO:0034357 photosynthetic membrane 0.46% (1/219) 7.57 0.005267 0.022203
GO:0098809 nitrite reductase activity 0.46% (1/219) 7.57 0.005267 0.022203
GO:1902600 proton transmembrane transport 1.37% (3/219) 3.09 0.00539 0.022435
GO:0015078 proton transmembrane transporter activity 1.37% (3/219) 3.13 0.004952 0.022905
GO:1902494 catalytic complex 1.83% (4/219) 2.56 0.004937 0.023154
GO:0019637 organophosphate metabolic process 2.28% (5/219) 2.18 0.005154 0.023512
GO:0006352 DNA-templated transcription, initiation 0.91% (2/219) 3.81 0.00889 0.036546
Enriched Clades (corrected p-value < 0.05) (download table)
Clade % in cluster Enrichment log2 p-value Corrected p-value Gene Family Method
No enriched Clades found
Similar Clusters (download table)
Species Clustering Method Target Jaccard index Gene Family Method (for comparison) Actions
Arabidopsis thaliana HCCA Cluster_20 0.034 Archaeplastida Compare
Arabidopsis thaliana HCCA Cluster_29 0.037 Archaeplastida Compare
Arabidopsis thaliana HCCA Cluster_34 0.037 Archaeplastida Compare
Arabidopsis thaliana HCCA Cluster_48 0.021 Archaeplastida Compare
Arabidopsis thaliana HCCA Cluster_50 0.019 Archaeplastida Compare
Arabidopsis thaliana HCCA Cluster_67 0.022 Archaeplastida Compare
Arabidopsis thaliana HCCA Cluster_87 0.027 Archaeplastida Compare
Arabidopsis thaliana HCCA Cluster_89 0.02 Archaeplastida Compare
Arabidopsis thaliana HCCA Cluster_98 0.112 Archaeplastida Compare
Arabidopsis thaliana HCCA Cluster_106 0.057 Archaeplastida Compare
Arabidopsis thaliana HCCA Cluster_150 0.022 Archaeplastida Compare
Arabidopsis thaliana HCCA Cluster_151 0.041 Archaeplastida Compare
Arabidopsis thaliana HCCA Cluster_175 0.04 Archaeplastida Compare
Arabidopsis thaliana HCCA Cluster_185 0.022 Archaeplastida Compare
Arabidopsis thaliana HCCA Cluster_197 0.02 Archaeplastida Compare
Arabidopsis thaliana HCCA Cluster_205 0.02 Archaeplastida Compare
Arabidopsis thaliana HCCA Cluster_227 0.059 Archaeplastida Compare
Arabidopsis thaliana HCCA Cluster_239 0.084 Archaeplastida Compare
Arabidopsis thaliana HCCA Cluster_246 0.019 Archaeplastida Compare
Amborella trichopoda HCCA Cluster_23 0.04 Archaeplastida Compare
Amborella trichopoda HCCA Cluster_56 0.03 Archaeplastida Compare
Amborella trichopoda HCCA Cluster_59 0.038 Archaeplastida Compare
Amborella trichopoda HCCA Cluster_76 0.025 Archaeplastida Compare
Amborella trichopoda HCCA Cluster_107 0.06 Archaeplastida Compare
Amborella trichopoda HCCA Cluster_119 0.024 Archaeplastida Compare
Amborella trichopoda HCCA Cluster_124 0.04 Archaeplastida Compare
Amborella trichopoda HCCA Cluster_153 0.055 Archaeplastida Compare
Amborella trichopoda HCCA Cluster_179 0.024 Archaeplastida Compare
Amborella trichopoda HCCA Cluster_197 0.036 Archaeplastida Compare
Amborella trichopoda HCCA Cluster_239 0.02 Archaeplastida Compare
Cyanophora paradoxa HCCA Cluster_12 0.02 Archaeplastida Compare
Cyanophora paradoxa HCCA Cluster_49 0.019 Archaeplastida Compare
Cyanophora paradoxa HCCA Cluster_136 0.024 Archaeplastida Compare
Gingko biloba HCCA Cluster_36 0.019 Archaeplastida Compare
Gingko biloba HCCA Cluster_53 0.022 Archaeplastida Compare
Gingko biloba HCCA Cluster_65 0.027 Archaeplastida Compare
Gingko biloba HCCA Cluster_111 0.076 Archaeplastida Compare
Gingko biloba HCCA Cluster_133 0.039 Archaeplastida Compare
Gingko biloba HCCA Cluster_135 0.024 Archaeplastida Compare
Gingko biloba HCCA Cluster_250 0.052 Archaeplastida Compare
Gingko biloba HCCA Cluster_269 0.029 Archaeplastida Compare
Gingko biloba HCCA Cluster_302 0.049 Archaeplastida Compare
Gingko biloba HCCA Cluster_307 0.022 Archaeplastida Compare
Zea mays HCCA Cluster_2 0.027 Archaeplastida Compare
Zea mays HCCA Cluster_11 0.026 Archaeplastida Compare
Zea mays HCCA Cluster_22 0.019 Archaeplastida Compare
Zea mays HCCA Cluster_77 0.019 Archaeplastida Compare
Zea mays HCCA Cluster_81 0.02 Archaeplastida Compare
Zea mays HCCA Cluster_105 0.029 Archaeplastida Compare
Zea mays HCCA Cluster_133 0.025 Archaeplastida Compare
Zea mays HCCA Cluster_148 0.032 Archaeplastida Compare
Zea mays HCCA Cluster_163 0.021 Archaeplastida Compare
Zea mays HCCA Cluster_208 0.027 Archaeplastida Compare
Zea mays HCCA Cluster_211 0.02 Archaeplastida Compare
Zea mays HCCA Cluster_253 0.027 Archaeplastida Compare
Zea mays HCCA Cluster_337 0.021 Archaeplastida Compare
Marchantia polymorpha HCCA Cluster_6 0.046 Archaeplastida Compare
Marchantia polymorpha HCCA Cluster_13 0.022 Archaeplastida Compare
Marchantia polymorpha HCCA Cluster_52 0.076 Archaeplastida Compare
Marchantia polymorpha HCCA Cluster_65 0.042 Archaeplastida Compare
Marchantia polymorpha HCCA Cluster_83 0.024 Archaeplastida Compare
Marchantia polymorpha HCCA Cluster_133 0.047 Archaeplastida Compare
Marchantia polymorpha HCCA Cluster_177 0.033 Archaeplastida Compare
Physcomitrella patens HCCA Cluster_32 0.076 Archaeplastida Compare
Physcomitrella patens HCCA Cluster_46 0.046 Archaeplastida Compare
Physcomitrella patens HCCA Cluster_50 0.019 Archaeplastida Compare
Physcomitrella patens HCCA Cluster_88 0.043 Archaeplastida Compare
Physcomitrella patens HCCA Cluster_160 0.025 Archaeplastida Compare
Physcomitrella patens HCCA Cluster_199 0.019 Archaeplastida Compare
Physcomitrella patens HCCA Cluster_207 0.032 Archaeplastida Compare
Physcomitrella patens HCCA Cluster_224 0.077 Archaeplastida Compare
Physcomitrella patens HCCA Cluster_245 0.02 Archaeplastida Compare
Physcomitrella patens HCCA Cluster_249 0.035 Archaeplastida Compare
Physcomitrella patens HCCA Cluster_275 0.032 Archaeplastida Compare
Physcomitrella patens HCCA Cluster_294 0.033 Archaeplastida Compare
Picea abies HCCA Cluster_6 0.021 Archaeplastida Compare
Picea abies HCCA Cluster_27 0.033 Archaeplastida Compare
Picea abies HCCA Cluster_53 0.036 Archaeplastida Compare
Picea abies HCCA Cluster_77 0.021 Archaeplastida Compare
Picea abies HCCA Cluster_137 0.021 Archaeplastida Compare
Picea abies HCCA Cluster_145 0.049 Archaeplastida Compare
Picea abies HCCA Cluster_218 0.019 Archaeplastida Compare
Picea abies HCCA Cluster_226 0.02 Archaeplastida Compare
Picea abies HCCA Cluster_227 0.072 Archaeplastida Compare
Picea abies HCCA Cluster_266 0.022 Archaeplastida Compare
Picea abies HCCA Cluster_292 0.025 Archaeplastida Compare
Picea abies HCCA Cluster_456 0.028 Archaeplastida Compare
Picea abies HCCA Cluster_465 0.058 Archaeplastida Compare
Picea abies HCCA Cluster_532 0.02 Archaeplastida Compare
Oryza sativa HCCA Cluster_14 0.034 Archaeplastida Compare
Oryza sativa HCCA Cluster_15 0.024 Archaeplastida Compare
Oryza sativa HCCA Cluster_16 0.025 Archaeplastida Compare
Oryza sativa HCCA Cluster_19 0.024 Archaeplastida Compare
Oryza sativa HCCA Cluster_23 0.032 Archaeplastida Compare
Oryza sativa HCCA Cluster_35 0.036 Archaeplastida Compare
Oryza sativa HCCA Cluster_63 0.071 Archaeplastida Compare
Oryza sativa HCCA Cluster_65 0.032 Archaeplastida Compare
Oryza sativa HCCA Cluster_82 0.022 Archaeplastida Compare
Oryza sativa HCCA Cluster_90 0.04 Archaeplastida Compare
Oryza sativa HCCA Cluster_106 0.021 Archaeplastida Compare
Oryza sativa HCCA Cluster_110 0.022 Archaeplastida Compare
Oryza sativa HCCA Cluster_148 0.054 Archaeplastida Compare
Oryza sativa HCCA Cluster_161 0.02 Archaeplastida Compare
Oryza sativa HCCA Cluster_163 0.028 Archaeplastida Compare
Oryza sativa HCCA Cluster_170 0.019 Archaeplastida Compare
Oryza sativa HCCA Cluster_189 0.139 Archaeplastida Compare
Oryza sativa HCCA Cluster_208 0.032 Archaeplastida Compare
Oryza sativa HCCA Cluster_217 0.031 Archaeplastida Compare
Oryza sativa HCCA Cluster_246 0.023 Archaeplastida Compare
Oryza sativa HCCA Cluster_256 0.032 Archaeplastida Compare
Oryza sativa HCCA Cluster_263 0.032 Archaeplastida Compare
Oryza sativa HCCA Cluster_277 0.023 Archaeplastida Compare
Oryza sativa HCCA Cluster_284 0.041 Archaeplastida Compare
Oryza sativa HCCA Cluster_291 0.036 Archaeplastida Compare
Oryza sativa HCCA Cluster_292 0.035 Archaeplastida Compare
Oryza sativa HCCA Cluster_308 0.029 Archaeplastida Compare
Oryza sativa HCCA Cluster_321 0.043 Archaeplastida Compare
Oryza sativa HCCA Cluster_324 0.025 Archaeplastida Compare
Selaginella moellendorffii HCCA Cluster_2 0.033 Archaeplastida Compare
Selaginella moellendorffii HCCA Cluster_40 0.027 Archaeplastida Compare
Selaginella moellendorffii HCCA Cluster_97 0.027 Archaeplastida Compare
Selaginella moellendorffii HCCA Cluster_106 0.022 Archaeplastida Compare
Selaginella moellendorffii HCCA Cluster_114 0.023 Archaeplastida Compare
Selaginella moellendorffii HCCA Cluster_129 0.02 Archaeplastida Compare
Selaginella moellendorffii HCCA Cluster_140 0.048 Archaeplastida Compare
Selaginella moellendorffii HCCA Cluster_186 0.03 Archaeplastida Compare
Selaginella moellendorffii HCCA Cluster_206 0.023 Archaeplastida Compare
Solanum lycopersicum HCCA Cluster_25 0.102 Archaeplastida Compare
Solanum lycopersicum HCCA Cluster_33 0.032 Archaeplastida Compare
Solanum lycopersicum HCCA Cluster_37 0.035 Archaeplastida Compare
Solanum lycopersicum HCCA Cluster_44 0.019 Archaeplastida Compare
Solanum lycopersicum HCCA Cluster_45 0.02 Archaeplastida Compare
Solanum lycopersicum HCCA Cluster_59 0.021 Archaeplastida Compare
Solanum lycopersicum HCCA Cluster_73 0.036 Archaeplastida Compare
Solanum lycopersicum HCCA Cluster_78 0.021 Archaeplastida Compare
Solanum lycopersicum HCCA Cluster_102 0.057 Archaeplastida Compare
Solanum lycopersicum HCCA Cluster_119 0.021 Archaeplastida Compare
Solanum lycopersicum HCCA Cluster_128 0.056 Archaeplastida Compare
Solanum lycopersicum HCCA Cluster_161 0.019 Archaeplastida Compare
Solanum lycopersicum HCCA Cluster_169 0.066 Archaeplastida Compare
Solanum lycopersicum HCCA Cluster_186 0.021 Archaeplastida Compare
Solanum lycopersicum HCCA Cluster_197 0.023 Archaeplastida Compare
Solanum lycopersicum HCCA Cluster_211 0.021 Archaeplastida Compare
Solanum lycopersicum HCCA Cluster_224 0.043 Archaeplastida Compare
Solanum lycopersicum HCCA Cluster_230 0.02 Archaeplastida Compare
Solanum lycopersicum HCCA Cluster_271 0.033 Archaeplastida Compare
Vitis vinifera HCCA Cluster_5 0.019 Archaeplastida Compare
Vitis vinifera HCCA Cluster_13 0.028 Archaeplastida Compare
Vitis vinifera HCCA Cluster_27 0.019 Archaeplastida Compare
Vitis vinifera HCCA Cluster_47 0.026 Archaeplastida Compare
Vitis vinifera HCCA Cluster_52 0.03 Archaeplastida Compare
Vitis vinifera HCCA Cluster_88 0.084 Archaeplastida Compare
Vitis vinifera HCCA Cluster_93 0.106 Archaeplastida Compare
Vitis vinifera HCCA Cluster_104 0.019 Archaeplastida Compare
Vitis vinifera HCCA Cluster_115 0.023 Archaeplastida Compare
Vitis vinifera HCCA Cluster_124 0.055 Archaeplastida Compare
Vitis vinifera HCCA Cluster_145 0.02 Archaeplastida Compare
Vitis vinifera HCCA Cluster_162 0.06 Archaeplastida Compare
Vitis vinifera HCCA Cluster_176 0.053 Archaeplastida Compare
Vitis vinifera HCCA Cluster_228 0.021 Archaeplastida Compare
Chlamydomonas reinhardtii HCCA Cluster_1 0.052 Archaeplastida Compare
Chlamydomonas reinhardtii HCCA Cluster_32 0.04 Archaeplastida Compare
Chlamydomonas reinhardtii HCCA Cluster_61 0.052 Archaeplastida Compare
Chlamydomonas reinhardtii HCCA Cluster_85 0.03 Archaeplastida Compare
Chlamydomonas reinhardtii HCCA Cluster_119 0.023 Archaeplastida Compare
Chlamydomonas reinhardtii HCCA Cluster_129 0.025 Archaeplastida Compare
Sequences (219) (download table)

InterPro Domains

GO Terms

Family Terms