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AT3G19460


Description : Reticulon family protein


Gene families : OG0000225 (Archaeplastida) Phylogenetic Tree(s): OG0000225_tree ,
OG_05_0000137 (LandPlants) Phylogenetic Tree(s): OG_05_0000137_tree ,
OG_06_0001141 (SeedPlants) Phylogenetic Tree(s): OG_06_0001141_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: AT3G19460
Cluster HCCA: Cluster_176

Target Alias Description ECC score Gene Family Method Actions
LOC_Os03g56900.1 No alias ER-associated protein (Reticulon) 0.03 Archaeplastida
MA_10432084g0010 No alias ER-associated protein (Reticulon) 0.04 Archaeplastida

Type GO Term Name Evidence Source
MF GO:0003674 molecular_function ND Interproscan
CC GO:0005783 endoplasmic reticulum ISS Interproscan
BP GO:0008150 biological_process ND Interproscan
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Type GO Term Name Evidence Source
BP GO:0000724 double-strand break repair via homologous recombination IEP Neighborhood
BP GO:0000725 recombinational repair IEP Neighborhood
CC GO:0000808 origin recognition complex IEP Neighborhood
MF GO:0003729 mRNA binding IEP Neighborhood
BP GO:0006259 DNA metabolic process IEP Neighborhood
BP GO:0006302 double-strand break repair IEP Neighborhood
BP GO:0006310 DNA recombination IEP Neighborhood
BP GO:0006355 regulation of transcription, DNA-templated IEP Neighborhood
BP GO:0006914 autophagy IEP Neighborhood
BP GO:0007129 synapsis IEP Neighborhood
MF GO:0009982 pseudouridine synthase activity IEP Neighborhood
BP GO:0009987 cellular process IEP Neighborhood
MF GO:0016866 intramolecular transferase activity IEP Neighborhood
BP GO:0022402 cell cycle process IEP Neighborhood
BP GO:0030244 cellulose biosynthetic process IEP Neighborhood
BP GO:0031123 RNA 3'-end processing IEP Neighborhood
CC GO:0044427 chromosomal part IEP Neighborhood
BP GO:0048235 pollen sperm cell differentiation IEP Neighborhood
BP GO:0051274 beta-glucan biosynthetic process IEP Neighborhood
BP GO:0061919 process utilizing autophagic mechanism IEP Neighborhood
BP GO:0070192 chromosome organization involved in meiotic cell cycle IEP Neighborhood
BP GO:1903506 regulation of nucleic acid-templated transcription IEP Neighborhood
BP GO:2001141 regulation of RNA biosynthetic process IEP Neighborhood
InterPro domains Description Start Stop
IPR003388 Reticulon 22 176
No external refs found!