1. Home
  2. Species
  3. Arabidopsis thaliana
  4. Sequence
  5. AT1G13500

AT1G13500


Description : Protein of unknown function (DUF1262)


Gene families : OG0002947 (Archaeplastida) Phylogenetic Tree(s): OG0002947_tree ,
OG_05_0001982 (LandPlants) Phylogenetic Tree(s): OG_05_0001982_tree ,
OG_06_0001105 (SeedPlants) Phylogenetic Tree(s): OG_06_0001105_tree

Sequence : coding (download), protein (download)


Attention: This gene has low abundance.


Download

Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: AT1G13500
Cluster HCCA: Cluster_143

Target Alias Description ECC score Gene Family Method Actions
AMTR_s00006p00248680 evm_27.TU.AmTr_v1... No description available 0.04 Archaeplastida
AMTR_s00088p00054060 evm_27.TU.AmTr_v1... No description available 0.06 Archaeplastida
AMTR_s00088p00061690 evm_27.TU.AmTr_v1... No description available 0.03 Archaeplastida
AMTR_s00088p00061760 evm_27.TU.AmTr_v1... No description available 0.03 Archaeplastida
AMTR_s00088p00063810 evm_27.TU.AmTr_v1... No description available 0.03 Archaeplastida
AT1G13470 No alias Protein of unknown function (DUF1262) 0.03 Archaeplastida
AT1G13480 No alias Protein of unknown function (DUF1262) 0.04 Archaeplastida
AT1G13490 No alias Protein of unknown function (DUF1262) 0.05 Archaeplastida
AT1G13520 No alias Protein of unknown function (DUF1262) 0.1 Archaeplastida
AT1G13540 No alias Protein of unknown function (DUF1262) 0.07 Archaeplastida
GSVIVT01012026001 No alias No description available 0.04 Archaeplastida
Gb_01792 No alias no hits & (original description: none) 0.02 Archaeplastida
Gb_22146 No alias no hits & (original description: none) 0.02 Archaeplastida
LOC_Os08g31860.1 No alias no hits & (original description: none) 0.04 Archaeplastida
Solyc05g010460.4.1 No alias no hits & (original description: none) 0.05 Archaeplastida
Zm00001e022372_P001 No alias no hits & (original description: none) 0.03 Archaeplastida

Type GO Term Name Evidence Source
MF GO:0003674 molecular_function ND Interproscan
CC GO:0005575 cellular_component ND Interproscan
BP GO:0008150 biological_process ND Interproscan
Toggle parental
Type GO Term Name Evidence Source
MF GO:0003677 DNA binding IEP Neighborhood
MF GO:0003700 DNA-binding transcription factor activity IEP Neighborhood
MF GO:0005199 structural constituent of cell wall IEP Neighborhood
BP GO:0006714 sesquiterpenoid metabolic process IEP Neighborhood
MF GO:0008171 O-methyltransferase activity IEP Neighborhood
BP GO:0009698 phenylpropanoid metabolic process IEP Neighborhood
BP GO:0009699 phenylpropanoid biosynthetic process IEP Neighborhood
BP GO:0009712 catechol-containing compound metabolic process IEP Neighborhood
BP GO:0009713 catechol-containing compound biosynthetic process IEP Neighborhood
BP GO:0009801 cinnamic acid ester metabolic process IEP Neighborhood
BP GO:0009802 cinnamic acid ester biosynthetic process IEP Neighborhood
BP GO:0009809 lignin biosynthetic process IEP Neighborhood
MF GO:0009975 cyclase activity IEP Neighborhood
BP GO:0010197 polar nucleus fusion IEP Neighborhood
BP GO:0016106 sesquiterpenoid biosynthetic process IEP Neighborhood
MF GO:0030414 peptidase inhibitor activity IEP Neighborhood
CC GO:0031225 anchored component of membrane IEP Neighborhood
BP GO:0044550 secondary metabolite biosynthetic process IEP Neighborhood
BP GO:0045338 farnesyl diphosphate metabolic process IEP Neighborhood
MF GO:0061134 peptidase regulator activity IEP Neighborhood
MF GO:0080044 quercetin 7-O-glucosyltransferase activity IEP Neighborhood
MF GO:0090430 caffeoyl-CoA: alcohol caffeoyl transferase activity IEP Neighborhood
BP GO:0090431 alkyl caffeate ester biosynthetic process IEP Neighborhood
MF GO:0140110 transcription regulator activity IEP Neighborhood
InterPro domains Description Start Stop
IPR010683 DUF1262 23 121
No external refs found!