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  5. Zm00001e015258_P001

Zm00001e015258_P001


Description : accessory component ATG13 of ATG1-13 autophagosome assembly control complex


Gene families : OG0002239 (Archaeplastida) Phylogenetic Tree(s): OG0002239_tree ,
OG_05_0001886 (LandPlants) Phylogenetic Tree(s): OG_05_0001886_tree ,
OG_06_0002158 (SeedPlants) Phylogenetic Tree(s): OG_06_0002158_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Zm00001e015258_P001
Cluster HCCA: Cluster_308

Target Alias Description ECC score Gene Family Method Actions
AMTR_s00030p00024330 evm_27.TU.AmTr_v1... No description available 0.03 Archaeplastida
Gb_20559 No alias accessory component ATG13 of ATG1-13 autophagosome... 0.04 Archaeplastida
MA_43158g0020 No alias accessory component ATG13 of ATG1-13 autophagosome... 0.04 Archaeplastida
Smo404290 No alias Vesicle trafficking.autophagosome formation.ATG1-13... 0.05 Archaeplastida
Solyc03g096790.3.1 No alias accessory component ATG13 of ATG1-13 autophagosome... 0.03 Archaeplastida

Type GO Term Name Evidence Source
BP GO:0006914 autophagy IEA Interproscan
CC GO:1990316 Atg1/ULK1 kinase complex IEA Interproscan
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Type GO Term Name Evidence Source
CC GO:0000145 exocyst IEP Neighborhood
MF GO:0003700 DNA-binding transcription factor activity IEP Neighborhood
MF GO:0004197 cysteine-type endopeptidase activity IEP Neighborhood
MF GO:0005215 transporter activity IEP Neighborhood
MF GO:0005337 nucleoside transmembrane transporter activity IEP Neighborhood
BP GO:0006810 transport IEP Neighborhood
BP GO:0006887 exocytosis IEP Neighborhood
BP GO:0015858 nucleoside transport IEP Neighborhood
BP GO:0015931 nucleobase-containing compound transport IEP Neighborhood
MF GO:0015932 nucleobase-containing compound transmembrane transporter activity IEP Neighborhood
CC GO:0016021 integral component of membrane IEP Neighborhood
MF GO:0022857 transmembrane transporter activity IEP Neighborhood
CC GO:0031224 intrinsic component of membrane IEP Neighborhood
BP GO:0032940 secretion by cell IEP Neighborhood
CC GO:0044425 membrane part IEP Neighborhood
CC GO:0044448 cell cortex part IEP Neighborhood
BP GO:0046903 secretion IEP Neighborhood
BP GO:0050789 regulation of biological process IEP Neighborhood
BP GO:0050790 regulation of catalytic activity IEP Neighborhood
BP GO:0050794 regulation of cellular process IEP Neighborhood
BP GO:0051179 localization IEP Neighborhood
BP GO:0051234 establishment of localization IEP Neighborhood
BP GO:0055085 transmembrane transport IEP Neighborhood
BP GO:0065007 biological regulation IEP Neighborhood
BP GO:0065009 regulation of molecular function IEP Neighborhood
CC GO:0099023 tethering complex IEP Neighborhood
MF GO:0140110 transcription regulator activity IEP Neighborhood
BP GO:1901264 carbohydrate derivative transport IEP Neighborhood
MF GO:1901505 carbohydrate derivative transmembrane transporter activity IEP Neighborhood
BP GO:1901642 nucleoside transmembrane transport IEP Neighborhood
InterPro domains Description Start Stop
IPR018731 Atg13 97 204
No external refs found!