1. Home
  2. Species
  3. Arabidopsis thaliana
  4. Sequence
  5. AT3G20640

AT3G20640


Description : basic helix-loop-helix (bHLH) DNA-binding superfamily protein


Gene families : OG0000624 (Archaeplastida) Phylogenetic Tree(s): OG0000624_tree ,
OG_05_0000347 (LandPlants) Phylogenetic Tree(s): OG_05_0000347_tree ,
OG_06_0000255 (SeedPlants) Phylogenetic Tree(s): OG_06_0000255_tree

Sequence : coding (download), protein (download)


Download

Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: AT3G20640
Cluster HCCA: Cluster_148

Target Alias Description ECC score Gene Family Method Actions
AMTR_s00109p00114170 evm_27.TU.AmTr_v1... RNA biosynthesis.transcriptional activation.bHLH... 0.03 Archaeplastida
AT1G31050 No alias basic helix-loop-helix (bHLH) DNA-binding superfamily protein 0.04 Archaeplastida
AT4G29100 No alias basic helix-loop-helix (bHLH) DNA-binding superfamily protein 0.03 Archaeplastida
GSVIVT01009761001 No alias RNA biosynthesis.transcriptional activation.bHLH... 0.05 Archaeplastida
Gb_06063 No alias transcription factor (bHLH) 0.03 Archaeplastida
Gb_07584 No alias transcription factor (bHLH) 0.05 Archaeplastida
Gb_40387 No alias transcription factor (bHLH) 0.03 Archaeplastida
LOC_Os01g13000.1 No alias transcription factor (bHLH) 0.02 Archaeplastida
LOC_Os01g57580.1 No alias transcription factor (bHLH) 0.06 Archaeplastida
LOC_Os02g17680.1 No alias transcription factor (bHLH) 0.03 Archaeplastida
LOC_Os05g42180.1 No alias transcription factor (bHLH) 0.04 Archaeplastida
LOC_Os07g28890.1 No alias transcription factor (bHLH) 0.03 Archaeplastida
Solyc01g150101.1.1 No alias no hits & (original description: none) 0.03 Archaeplastida
Solyc03g120530.3.1 No alias transcription factor (bHLH) 0.05 Archaeplastida
Solyc06g066580.4.1 No alias transcription factor (bHLH) 0.05 Archaeplastida
Solyc07g020960.3.1 No alias transcription factor (bHLH) 0.07 Archaeplastida
Solyc08g014120.3.1 No alias transcription factor (bHLH) 0.02 Archaeplastida
Solyc10g006640.3.1 No alias transcription factor (bHLH) 0.06 Archaeplastida
Zm00001e007719_P001 No alias transcription factor (bHLH) 0.02 Archaeplastida
Zm00001e010350_P001 No alias transcription factor (bHLH) 0.04 Archaeplastida
Zm00001e016395_P001 No alias transcription factor (bHLH) 0.1 Archaeplastida
Zm00001e019609_P001 No alias transcription factor (bHLH) 0.02 Archaeplastida
Zm00001e025623_P002 No alias no hits & (original description: none) 0.03 Archaeplastida
Zm00001e031298_P001 No alias transcription factor (bHLH) 0.02 Archaeplastida
Zm00001e032055_P001 No alias transcription factor (bHLH) 0.04 Archaeplastida
Zm00001e034854_P002 No alias transcription factor (bHLH) 0.08 Archaeplastida
Zm00001e039938_P002 No alias transcription factor (bHLH) 0.03 Archaeplastida
Zm00001e041137_P002 No alias transcription factor (bHLH) 0.02 Archaeplastida

Type GO Term Name Evidence Source
MF GO:0003700 DNA-binding transcription factor activity ISS Interproscan
CC GO:0005634 nucleus ISM Interproscan
Toggle parental
Type GO Term Name Evidence Source
MF GO:0004620 phospholipase activity IEP Neighborhood
MF GO:0004629 phospholipase C activity IEP Neighborhood
MF GO:0004630 phospholipase D activity IEP Neighborhood
MF GO:0004672 protein kinase activity IEP Neighborhood
BP GO:0005985 sucrose metabolic process IEP Neighborhood
BP GO:0005986 sucrose biosynthetic process IEP Neighborhood
BP GO:0006521 regulation of cellular amino acid metabolic process IEP Neighborhood
BP GO:0006643 membrane lipid metabolic process IEP Neighborhood
BP GO:0006833 water transport IEP Neighborhood
BP GO:0007166 cell surface receptor signaling pathway IEP Neighborhood
BP GO:0007167 enzyme linked receptor protein signaling pathway IEP Neighborhood
BP GO:0007169 transmembrane receptor protein tyrosine kinase signaling pathway IEP Neighborhood
MF GO:0008081 phosphoric diester hydrolase activity IEP Neighborhood
BP GO:0009566 fertilization IEP Neighborhood
BP GO:0009567 double fertilization forming a zygote and endosperm IEP Neighborhood
BP GO:0009624 response to nematode IEP Neighborhood
MF GO:0009672 auxin:proton symporter activity IEP Neighborhood
BP GO:0009746 response to hexose IEP Neighborhood
BP GO:0009750 response to fructose IEP Neighborhood
BP GO:0009888 tissue development IEP Neighborhood
BP GO:0009914 hormone transport IEP Neighborhood
BP GO:0009926 auxin polar transport IEP Neighborhood
BP GO:0009962 regulation of flavonoid biosynthetic process IEP Neighborhood
BP GO:0009963 positive regulation of flavonoid biosynthetic process IEP Neighborhood
BP GO:0010087 phloem or xylem histogenesis IEP Neighborhood
BP GO:0010089 xylem development IEP Neighborhood
BP GO:0010252 auxin homeostasis IEP Neighborhood
MF GO:0015075 ion transmembrane transporter activity IEP Neighborhood
MF GO:0015078 proton transmembrane transporter activity IEP Neighborhood
MF GO:0015291 secondary active transmembrane transporter activity IEP Neighborhood
MF GO:0015293 symporter activity IEP Neighborhood
MF GO:0015294 solute:cation symporter activity IEP Neighborhood
MF GO:0015295 solute:proton symporter activity IEP Neighborhood
MF GO:0015318 inorganic molecular entity transmembrane transporter activity IEP Neighborhood
BP GO:0015800 acidic amino acid transport IEP Neighborhood
MF GO:0016157 sucrose synthase activity IEP Neighborhood
MF GO:0016298 lipase activity IEP Neighborhood
MF GO:0016832 aldehyde-lyase activity IEP Neighborhood
BP GO:0031347 regulation of defense response IEP Neighborhood
BP GO:0032350 regulation of hormone metabolic process IEP Neighborhood
BP GO:0032352 positive regulation of hormone metabolic process IEP Neighborhood
BP GO:0033238 regulation of cellular amine metabolic process IEP Neighborhood
BP GO:0033240 positive regulation of cellular amine metabolic process IEP Neighborhood
BP GO:0034284 response to monosaccharide IEP Neighborhood
BP GO:0042044 fluid transport IEP Neighborhood
BP GO:0045764 positive regulation of cellular amino acid metabolic process IEP Neighborhood
BP GO:0045927 positive regulation of growth IEP Neighborhood
BP GO:0046351 disaccharide biosynthetic process IEP Neighborhood
BP GO:0046466 membrane lipid catabolic process IEP Neighborhood
BP GO:0048518 positive regulation of biological process IEP Neighborhood
BP GO:0060918 auxin transport IEP Neighborhood
BP GO:0060919 auxin influx IEP Neighborhood
BP GO:0062013 positive regulation of small molecule metabolic process IEP Neighborhood
BP GO:0080134 regulation of response to stress IEP Neighborhood
MF GO:0080161 auxin transmembrane transporter activity IEP Neighborhood
BP GO:0080162 intracellular auxin transport IEP Neighborhood
BP GO:0080165 callose deposition in phloem sieve plate IEP Neighborhood
BP GO:0090354 regulation of auxin metabolic process IEP Neighborhood
BP GO:0090355 positive regulation of auxin metabolic process IEP Neighborhood
BP GO:0090357 regulation of tryptophan metabolic process IEP Neighborhood
BP GO:0090358 positive regulation of tryptophan metabolic process IEP Neighborhood
BP GO:2000603 regulation of secondary growth IEP Neighborhood
BP GO:2000605 positive regulation of secondary growth IEP Neighborhood

No InterPro domains available for this sequence

No external refs found!