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  5. AT3G20880

AT3G20880 (WIP4)


Aliases : WIP4

Description : WIP domain protein 4


Gene families : OG0000935 (Archaeplastida) Phylogenetic Tree(s): OG0000935_tree ,
OG_05_0000679 (LandPlants) Phylogenetic Tree(s): OG_05_0000679_tree ,
OG_06_0000528 (SeedPlants) Phylogenetic Tree(s): OG_06_0000528_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: AT3G20880
Cluster HCCA: Cluster_55

Target Alias Description ECC score Gene Family Method Actions
GSVIVT01033329001 No alias RNA biosynthesis.transcriptional activation.C2H2 zinc... 0.03 Archaeplastida
LOC_Os01g63980.1 No alias C2H2 zinc finger transcription factor 0.02 Archaeplastida
LOC_Os06g40960.1 No alias C2H2 zinc finger transcription factor 0.01 Archaeplastida
LOC_Os09g10980.1 No alias C2H2 zinc finger transcription factor 0.01 Archaeplastida
LOC_Os09g13680.1 No alias C2H2 zinc finger transcription factor 0.02 Archaeplastida
Pp3c15_17790V3.1 No alias C2H2-type zinc finger family protein 0.02 Archaeplastida
Solyc11g062060.3.1 No alias C2H2 zinc finger transcription factor 0.01 Archaeplastida
Zm00001e003504_P001 No alias C2H2 zinc finger transcription factor 0.03 Archaeplastida
Zm00001e009663_P001 No alias C2H2 zinc finger transcription factor 0.03 Archaeplastida
Zm00001e024373_P001 No alias C2H2 zinc finger transcription factor 0.04 Archaeplastida
Zm00001e034518_P001 No alias C2H2 zinc finger transcription factor 0.01 Archaeplastida

Type GO Term Name Evidence Source
MF GO:0003676 nucleic acid binding ISS Interproscan
MF GO:0003700 DNA-binding transcription factor activity ISS Interproscan
CC GO:0005634 nucleus IDA Interproscan
CC GO:0005634 nucleus ISM Interproscan
BP GO:0006355 regulation of transcription, DNA-templated TAS Interproscan
MF GO:0008270 zinc ion binding ISS Interproscan
Toggle parental
Type GO Term Name Evidence Source
MF GO:0000030 mannosyltransferase activity IEP Neighborhood
BP GO:0000103 sulfate assimilation IEP Neighborhood
MF GO:0000287 magnesium ion binding IEP Neighborhood
BP GO:0001505 regulation of neurotransmitter levels IEP Neighborhood
BP GO:0002229 defense response to oomycetes IEP Neighborhood
BP GO:0002239 response to oomycetes IEP Neighborhood
MF GO:0003863 3-methyl-2-oxobutanoate dehydrogenase (2-methylpropanoyl-transferring) activity IEP Neighborhood
MF GO:0004020 adenylylsulfate kinase activity IEP Neighborhood
MF GO:0004422 hypoxanthine phosphoribosyltransferase activity IEP Neighborhood
MF GO:0004582 dolichyl-phosphate beta-D-mannosyltransferase activity IEP Neighborhood
MF GO:0004602 glutathione peroxidase activity IEP Neighborhood
MF GO:0004686 elongation factor-2 kinase activity IEP Neighborhood
MF GO:0004708 MAP kinase kinase activity IEP Neighborhood
MF GO:0004871 obsolete signal transducer activity IEP Neighborhood
MF GO:0005102 signaling receptor binding IEP Neighborhood
CC GO:0005615 extracellular space IEP Neighborhood
CC GO:0005663 DNA replication factor C complex IEP Neighborhood
CC GO:0005886 plasma membrane IEP Neighborhood
BP GO:0006089 lactate metabolic process IEP Neighborhood
BP GO:0006144 purine nucleobase metabolic process IEP Neighborhood
BP GO:0006166 purine ribonucleoside salvage IEP Neighborhood
BP GO:0006168 adenine salvage IEP Neighborhood
BP GO:0006177 GMP biosynthetic process IEP Neighborhood
BP GO:0006178 guanine salvage IEP Neighborhood
BP GO:0006188 IMP biosynthetic process IEP Neighborhood
BP GO:0006544 glycine metabolic process IEP Neighborhood
BP GO:0006546 glycine catabolic process IEP Neighborhood
BP GO:0006568 tryptophan metabolic process IEP Neighborhood
BP GO:0006569 tryptophan catabolic process IEP Neighborhood
BP GO:0006576 cellular biogenic amine metabolic process IEP Neighborhood
BP GO:0006586 indolalkylamine metabolic process IEP Neighborhood
BP GO:0007389 pattern specification process IEP Neighborhood
MF GO:0008083 growth factor activity IEP Neighborhood
BP GO:0008361 regulation of cell size IEP Neighborhood
BP GO:0009063 cellular amino acid catabolic process IEP Neighborhood
BP GO:0009069 serine family amino acid metabolic process IEP Neighborhood
BP GO:0009071 serine family amino acid catabolic process IEP Neighborhood
BP GO:0009072 aromatic amino acid family metabolic process IEP Neighborhood
BP GO:0009074 aromatic amino acid family catabolic process IEP Neighborhood
BP GO:0009113 purine nucleobase biosynthetic process IEP Neighborhood
BP GO:0009163 nucleoside biosynthetic process IEP Neighborhood
BP GO:0009308 amine metabolic process IEP Neighborhood
BP GO:0009310 amine catabolic process IEP Neighborhood
CC GO:0009368 endopeptidase Clp complex IEP Neighborhood
BP GO:0009403 toxin biosynthetic process IEP Neighborhood
BP GO:0009404 toxin metabolic process IEP Neighborhood
BP GO:0009410 response to xenobiotic stimulus IEP Neighborhood
BP GO:0009438 methylglyoxal metabolic process IEP Neighborhood
BP GO:0009605 response to external stimulus IEP Neighborhood
BP GO:0009606 tropism IEP Neighborhood
BP GO:0009624 response to nematode IEP Neighborhood
BP GO:0009629 response to gravity IEP Neighborhood
BP GO:0009630 gravitropism IEP Neighborhood
MF GO:0009672 auxin:proton symporter activity IEP Neighborhood
BP GO:0009682 induced systemic resistance IEP Neighborhood
BP GO:0009683 indoleacetic acid metabolic process IEP Neighborhood
BP GO:0009684 indoleacetic acid biosynthetic process IEP Neighborhood
BP GO:0009692 ethylene metabolic process IEP Neighborhood
BP GO:0009693 ethylene biosynthetic process IEP Neighborhood
BP GO:0009700 indole phytoalexin biosynthetic process IEP Neighborhood
CC GO:0009840 chloroplastic endopeptidase Clp complex IEP Neighborhood
BP GO:0009850 auxin metabolic process IEP Neighborhood
BP GO:0009851 auxin biosynthetic process IEP Neighborhood
BP GO:0009873 ethylene-activated signaling pathway IEP Neighborhood
BP GO:0009888 tissue development IEP Neighborhood
BP GO:0009908 flower development IEP Neighborhood
BP GO:0009909 regulation of flower development IEP Neighborhood
BP GO:0009914 hormone transport IEP Neighborhood
CC GO:0009925 basal plasma membrane IEP Neighborhood
BP GO:0009926 auxin polar transport IEP Neighborhood
BP GO:0009944 polarity specification of adaxial/abaxial axis IEP Neighborhood
BP GO:0009958 positive gravitropism IEP Neighborhood
BP GO:0010051 xylem and phloem pattern formation IEP Neighborhood
BP GO:0010073 meristem maintenance IEP Neighborhood
BP GO:0010075 regulation of meristem growth IEP Neighborhood
BP GO:0010082 regulation of root meristem growth IEP Neighborhood
BP GO:0010087 phloem or xylem histogenesis IEP Neighborhood
BP GO:0010089 xylem development IEP Neighborhood
BP GO:0010112 regulation of systemic acquired resistance IEP Neighborhood
BP GO:0010120 camalexin biosynthetic process IEP Neighborhood
BP GO:0010338 leaf formation IEP Neighborhood
BP GO:0010358 leaf shaping IEP Neighborhood
MF GO:0010436 carotenoid dioxygenase activity IEP Neighborhood
BP GO:0010439 regulation of glucosinolate biosynthetic process IEP Neighborhood
BP GO:0010444 guard mother cell differentiation IEP Neighborhood
BP GO:0010588 cotyledon vascular tissue pattern formation IEP Neighborhood
BP GO:0010817 regulation of hormone levels IEP Neighborhood
MF GO:0016624 oxidoreductase activity, acting on the aldehyde or oxo group of donors, disulfide as acceptor IEP Neighborhood
MF GO:0019209 kinase activator activity IEP Neighborhood
BP GO:0019243 methylglyoxal catabolic process to D-lactate via S-lactoyl-glutathione IEP Neighborhood
BP GO:0019827 stem cell population maintenance IEP Neighborhood
MF GO:0030295 protein kinase activator activity IEP Neighborhood
MF GO:0030545 receptor regulator activity IEP Neighborhood
CC GO:0031501 mannosyltransferase complex IEP Neighborhood
MF GO:0031624 ubiquitin conjugating enzyme binding IEP Neighborhood
BP GO:0032261 purine nucleotide salvage IEP Neighborhood
BP GO:0032263 GMP salvage IEP Neighborhood
BP GO:0032264 IMP salvage IEP Neighborhood
BP GO:0032535 regulation of cellular component size IEP Neighborhood
CC GO:0033185 dolichol-phosphate-mannose synthase complex IEP Neighborhood
BP GO:0034754 cellular hormone metabolic process IEP Neighborhood
BP GO:0040008 regulation of growth IEP Neighborhood
BP GO:0042133 neurotransmitter metabolic process IEP Neighborhood
BP GO:0042135 neurotransmitter catabolic process IEP Neighborhood
BP GO:0042182 ketone catabolic process IEP Neighborhood
BP GO:0042278 purine nucleoside metabolic process IEP Neighborhood
BP GO:0042402 cellular biogenic amine catabolic process IEP Neighborhood
BP GO:0042430 indole-containing compound metabolic process IEP Neighborhood
BP GO:0042435 indole-containing compound biosynthetic process IEP Neighborhood
BP GO:0042436 indole-containing compound catabolic process IEP Neighborhood
BP GO:0042445 hormone metabolic process IEP Neighborhood
BP GO:0042446 hormone biosynthetic process IEP Neighborhood
BP GO:0042451 purine nucleoside biosynthetic process IEP Neighborhood
BP GO:0042455 ribonucleoside biosynthetic process IEP Neighborhood
BP GO:0042762 regulation of sulfur metabolic process IEP Neighborhood
BP GO:0043096 purine nucleobase salvage IEP Neighborhood
BP GO:0043101 purine-containing compound salvage IEP Neighborhood
BP GO:0043173 nucleotide salvage IEP Neighborhood
BP GO:0043174 nucleoside salvage IEP Neighborhood
MF GO:0043295 glutathione binding IEP Neighborhood
BP GO:0043449 cellular alkene metabolic process IEP Neighborhood
BP GO:0043450 alkene biosynthetic process IEP Neighborhood
BP GO:0043473 pigmentation IEP Neighborhood
BP GO:0043476 pigment accumulation IEP Neighborhood
BP GO:0043478 pigment accumulation in response to UV light IEP Neighborhood
BP GO:0043479 pigment accumulation in tissues in response to UV light IEP Neighborhood
BP GO:0043480 pigment accumulation in tissues IEP Neighborhood
BP GO:0043481 anthocyanin accumulation in tissues in response to UV light IEP Neighborhood
BP GO:0044106 cellular amine metabolic process IEP Neighborhood
BP GO:0044282 small molecule catabolic process IEP Neighborhood
MF GO:0044390 ubiquitin-like protein conjugating enzyme binding IEP Neighborhood
CC GO:0045177 apical part of cell IEP Neighborhood
MF GO:0045549 9-cis-epoxycarotenoid dioxygenase activity IEP Neighborhood
BP GO:0045926 negative regulation of growth IEP Neighborhood
BP GO:0046037 GMP metabolic process IEP Neighborhood
BP GO:0046040 IMP metabolic process IEP Neighborhood
BP GO:0046083 adenine metabolic process IEP Neighborhood
BP GO:0046084 adenine biosynthetic process IEP Neighborhood
BP GO:0046098 guanine metabolic process IEP Neighborhood
BP GO:0046099 guanine biosynthetic process IEP Neighborhood
BP GO:0046100 hypoxanthine metabolic process IEP Neighborhood
BP GO:0046112 nucleobase biosynthetic process IEP Neighborhood
BP GO:0046128 purine ribonucleoside metabolic process IEP Neighborhood
BP GO:0046129 purine ribonucleoside biosynthetic process IEP Neighborhood
BP GO:0046185 aldehyde catabolic process IEP Neighborhood
BP GO:0046217 indole phytoalexin metabolic process IEP Neighborhood
BP GO:0046218 indolalkylamine catabolic process IEP Neighborhood
BP GO:0046620 regulation of organ growth IEP Neighborhood
BP GO:0046621 negative regulation of organ growth IEP Neighborhood
MF GO:0048018 receptor ligand activity IEP Neighborhood
BP GO:0048232 male gamete generation IEP Neighborhood
BP GO:0048364 root development IEP Neighborhood
BP GO:0048449 floral organ formation IEP Neighborhood
BP GO:0048509 regulation of meristem development IEP Neighborhood
BP GO:0048598 embryonic morphogenesis IEP Neighborhood
BP GO:0048638 regulation of developmental growth IEP Neighborhood
BP GO:0048640 negative regulation of developmental growth IEP Neighborhood
BP GO:0048646 anatomical structure formation involved in morphogenesis IEP Neighborhood
BP GO:0048826 cotyledon morphogenesis IEP Neighborhood
BP GO:0048829 root cap development IEP Neighborhood
BP GO:0048831 regulation of shoot system development IEP Neighborhood
BP GO:0050793 regulation of developmental process IEP Neighborhood
BP GO:0051239 regulation of multicellular organismal process IEP Neighborhood
BP GO:0051596 methylglyoxal catabolic process IEP Neighborhood
BP GO:0051865 protein autoubiquitination IEP Neighborhood
BP GO:0052314 phytoalexin metabolic process IEP Neighborhood
BP GO:0052315 phytoalexin biosynthetic process IEP Neighborhood
BP GO:0052317 camalexin metabolic process IEP Neighborhood
BP GO:0052482 defense response by cell wall thickening IEP Neighborhood
BP GO:0052544 defense response by callose deposition in cell wall IEP Neighborhood
BP GO:0060359 response to ammonium ion IEP Neighborhood
BP GO:0060918 auxin transport IEP Neighborhood
BP GO:0061727 methylglyoxal catabolic process to lactate IEP Neighborhood
BP GO:0065001 specification of axis polarity IEP Neighborhood
BP GO:0065008 regulation of biological quality IEP Neighborhood
CC GO:0071944 cell periphery IEP Neighborhood
MF GO:0072341 modified amino acid binding IEP Neighborhood
BP GO:0090066 regulation of anatomical structure size IEP Neighborhood
BP GO:0090567 reproductive shoot system development IEP Neighborhood
BP GO:0090627 plant epidermal cell differentiation IEP Neighborhood
BP GO:0098727 maintenance of cell number IEP Neighborhood
BP GO:0099402 plant organ development IEP Neighborhood
MF GO:0106130 purine phosphoribosyltransferase activity IEP Neighborhood
BP GO:1900376 regulation of secondary metabolite biosynthetic process IEP Neighborhood
BP GO:1900673 olefin metabolic process IEP Neighborhood
BP GO:1900674 olefin biosynthetic process IEP Neighborhood
MF GO:1900750 oligopeptide binding IEP Neighborhood
BP GO:1901068 guanosine-containing compound metabolic process IEP Neighborhood
BP GO:1901070 guanosine-containing compound biosynthetic process IEP Neighborhood
BP GO:1901606 alpha-amino acid catabolic process IEP Neighborhood
BP GO:1901657 glycosyl compound metabolic process IEP Neighborhood
BP GO:1901659 glycosyl compound biosynthetic process IEP Neighborhood
BP GO:1905393 plant organ formation IEP Neighborhood
BP GO:2000026 regulation of multicellular organismal development IEP Neighborhood
BP GO:2000241 regulation of reproductive process IEP Neighborhood
BP GO:2000280 regulation of root development IEP Neighborhood

No InterPro domains available for this sequence

No external refs found!