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  5. Zm00001e015930_P003

Zm00001e015930_P003


Description : component CTU1 of CTU1-CTU2 tRNA thiouridylase complex


Gene families : OG0005202 (Archaeplastida) Phylogenetic Tree(s): OG0005202_tree ,
OG_05_0005767 (LandPlants) Phylogenetic Tree(s): OG_05_0005767_tree ,
OG_06_0006105 (SeedPlants) Phylogenetic Tree(s): OG_06_0006105_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Zm00001e015930_P003
Cluster HCCA: Cluster_341

Target Alias Description ECC score Gene Family Method Actions
AMTR_s00001p00247720 evm_27.TU.AmTr_v1... RNA processing.RNA modification.thiolation.CTU1-URM1... 0.02 Archaeplastida
Pp3c27_3320V3.1 No alias repressor of lrx1 0.02 Archaeplastida

Type GO Term Name Evidence Source

No GO annotation available for this sequence
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Type GO Term Name Evidence Source
BP GO:0002097 tRNA wobble base modification IEP Neighborhood
BP GO:0002098 tRNA wobble uridine modification IEP Neighborhood
BP GO:0006396 RNA processing IEP Neighborhood
BP GO:0006399 tRNA metabolic process IEP Neighborhood
BP GO:0006400 tRNA modification IEP Neighborhood
BP GO:0008033 tRNA processing IEP Neighborhood
BP GO:0009451 RNA modification IEP Neighborhood
CC GO:0033588 Elongator holoenzyme complex IEP Neighborhood
BP GO:0034470 ncRNA processing IEP Neighborhood
BP GO:0034660 ncRNA metabolic process IEP Neighborhood
InterPro domains Description Start Stop
IPR032442 CTU1_C 379 409
IPR011063 TilS/TtcA_N 152 343
No external refs found!