Coexpression cluster: Cluster_341 (HCCA)

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Average Expression Profile

Enriched GO Terms (corrected p-value < 0.05) (download table)
ID Label % in cluster Enrichment log2 p-value Corrected p-value
GO:0042765 GPI-anchor transamidase complex 2.38% (2/84) 8.37 1.2e-05 0.003045
GO:0006725 cellular aromatic compound metabolic process 9.52% (8/84) 2.45 0.000113 0.005689
GO:1901360 organic cyclic compound metabolic process 9.52% (8/84) 2.41 0.000137 0.005762
GO:0044422 organelle part 7.14% (6/84) 3.02 0.000103 0.006515
GO:0044446 intracellular organelle part 7.14% (6/84) 3.02 0.000103 0.006515
GO:0090304 nucleic acid metabolic process 8.33% (7/84) 2.86 5.3e-05 0.006676
GO:0006400 tRNA modification 2.38% (2/84) 6.25 0.00031 0.007104
GO:0044464 cell part 11.9% (10/84) 1.9 0.000342 0.007181
GO:0006139 nucleobase-containing compound metabolic process 8.33% (7/84) 2.45 0.000302 0.007604
GO:0044424 intracellular part 11.9% (10/84) 1.96 0.000248 0.0078
GO:0043170 macromolecule metabolic process 17.86% (15/84) 1.47 0.000284 0.007962
GO:0006807 nitrogen compound metabolic process 19.05% (16/84) 1.43 0.000238 0.008565
GO:0008641 ubiquitin-like modifier activating enzyme activity 2.38% (2/84) 5.86 0.000538 0.009036
GO:0016877 ligase activity, forming carbon-sulfur bonds 2.38% (2/84) 5.86 0.000538 0.009036
GO:0044237 cellular metabolic process 19.05% (16/84) 1.33 0.000504 0.009764
GO:0016070 RNA metabolic process 5.95% (5/84) 2.81 0.000755 0.010016
GO:0046483 heterocycle metabolic process 8.33% (7/84) 2.26 0.000659 0.010381
GO:0044238 primary metabolic process 20.24% (17/84) 1.23 0.000754 0.010562
GO:0006399 tRNA metabolic process 3.57% (3/84) 4.11 0.000721 0.010694
GO:0045116 protein neddylation 1.19% (1/84) 8.95 0.00202 0.013761
GO:0019781 NEDD8 activating enzyme activity 1.19% (1/84) 8.95 0.00202 0.013761
GO:0006474 N-terminal protein amino acid acetylation 1.19% (1/84) 8.95 0.00202 0.013761
GO:0031417 NatC complex 1.19% (1/84) 8.95 0.00202 0.013761
GO:0031414 N-terminal protein acetyltransferase complex 1.19% (1/84) 8.95 0.00202 0.013761
GO:0017196 N-terminal peptidyl-methionine acetylation 1.19% (1/84) 8.95 0.00202 0.013761
GO:0036297 interstrand cross-link repair 1.19% (1/84) 8.95 0.00202 0.013761
GO:0018206 peptidyl-methionine modification 1.19% (1/84) 8.95 0.00202 0.013761
GO:0106073 dolichyl pyrophosphate Glc2Man9GlcNAc2 alpha-1,2-glucosyltransferase activity 1.19% (1/84) 8.95 0.00202 0.013761
GO:0043240 Fanconi anaemia nuclear complex 1.19% (1/84) 8.95 0.00202 0.013761
GO:0003856 3-dehydroquinate synthase activity 1.19% (1/84) 8.95 0.00202 0.013761
GO:0008193 tRNA guanylyltransferase activity 1.19% (1/84) 8.95 0.00202 0.013761
GO:0009451 RNA modification 2.38% (2/84) 4.86 0.00217 0.014389
GO:1902494 catalytic complex 3.57% (3/84) 3.52 0.002315 0.014957
GO:0071704 organic substance metabolic process 20.24% (17/84) 1.17 0.001198 0.0151
GO:0044428 nuclear part 3.57% (3/84) 3.81 0.001321 0.015852
GO:0044432 endoplasmic reticulum part 2.38% (2/84) 4.74 0.002566 0.016164
GO:0009987 cellular process 19.05% (16/84) 1.1 0.002728 0.016766
GO:0016874 ligase activity 3.57% (3/84) 3.69 0.001669 0.017522
GO:0034660 ncRNA metabolic process 3.57% (3/84) 3.73 0.001547 0.017722
GO:0003674 molecular_function 42.86% (36/84) 0.6 0.002994 0.017963
GO:0043412 macromolecule modification 10.71% (9/84) 1.58 0.003145 0.018015
GO:0006396 RNA processing 3.57% (3/84) 3.36 0.00322 0.018034
GO:0016757 transferase activity, transferring glycosyl groups 5.95% (5/84) 2.56 0.001666 0.018259
GO:0016765 transferase activity, transferring alkyl or aryl (other than methyl) groups 2.38% (2/84) 4.59 0.003142 0.018416
GO:0008033 tRNA processing 2.38% (2/84) 4.95 0.001923 0.019387
GO:0044451 nucleoplasm part 2.38% (2/84) 4.4 0.00411 0.021579
GO:0016255 attachment of GPI anchor to protein 1.19% (1/84) 7.95 0.004037 0.021644
GO:0031365 N-terminal protein amino acid modification 1.19% (1/84) 7.95 0.004037 0.021644
GO:0016740 transferase activity 14.29% (12/84) 1.24 0.004574 0.023523
GO:0034641 cellular nitrogen compound metabolic process 8.33% (7/84) 1.73 0.005317 0.026795
GO:0006488 dolichol-linked oligosaccharide biosynthetic process 1.19% (1/84) 7.37 0.006049 0.028229
GO:0070568 guanylyltransferase activity 1.19% (1/84) 7.37 0.006049 0.028229
GO:0006490 oligosaccharide-lipid intermediate biosynthetic process 1.19% (1/84) 7.37 0.006049 0.028229
GO:0008192 RNA guanylyltransferase activity 1.19% (1/84) 7.37 0.006049 0.028229
GO:0034470 ncRNA processing 2.38% (2/84) 4.09 0.006196 0.028387
GO:0097354 prenylation 1.19% (1/84) 6.95 0.008057 0.033841
GO:0018342 protein prenylation 1.19% (1/84) 6.95 0.008057 0.033841
GO:0006302 double-strand break repair 1.19% (1/84) 6.95 0.008057 0.033841
GO:0008318 protein prenyltransferase activity 1.19% (1/84) 6.95 0.008057 0.033841
GO:0004659 prenyltransferase activity 1.19% (1/84) 6.95 0.008057 0.033841
GO:0032991 protein-containing complex 7.14% (6/84) 1.77 0.008526 0.035221
GO:0006281 DNA repair 2.38% (2/84) 3.82 0.008911 0.03622
GO:0008168 methyltransferase activity 3.57% (3/84) 2.81 0.009199 0.036797
GO:0033554 cellular response to stress 2.38% (2/84) 3.72 0.010173 0.0377
GO:0051716 cellular response to stimulus 2.38% (2/84) 3.72 0.010173 0.0377
GO:0006974 cellular response to DNA damage stimulus 2.38% (2/84) 3.72 0.010173 0.0377
GO:0005515 protein binding 11.9% (10/84) 1.23 0.009843 0.038757
GO:0017056 structural constituent of nuclear pore 1.19% (1/84) 6.63 0.010062 0.039009
GO:0016741 transferase activity, transferring one-carbon groups 3.57% (3/84) 2.72 0.010803 0.039454
GO:0005669 transcription factor TFIID complex 1.19% (1/84) 6.37 0.012062 0.043423
GO:0043543 protein acylation 1.19% (1/84) 6.14 0.014058 0.04853
GO:0008373 sialyltransferase activity 1.19% (1/84) 6.14 0.014058 0.04853
GO:0006473 protein acetylation 1.19% (1/84) 6.14 0.014058 0.04853
Enriched Clades (corrected p-value < 0.05) (download table)
Clade % in cluster Enrichment log2 p-value Corrected p-value Gene Family Method
No enriched Clades found
Similar Clusters (download table)
Species Clustering Method Target Jaccard index Gene Family Method (for comparison) Actions
Arabidopsis thaliana HCCA Cluster_12 0.021 Archaeplastida Compare
Arabidopsis thaliana HCCA Cluster_101 0.021 Archaeplastida Compare
Arabidopsis thaliana HCCA Cluster_139 0.019 Archaeplastida Compare
Arabidopsis thaliana HCCA Cluster_204 0.029 Archaeplastida Compare
Arabidopsis thaliana HCCA Cluster_258 0.021 Archaeplastida Compare
Amborella trichopoda HCCA Cluster_12 0.019 Archaeplastida Compare
Amborella trichopoda HCCA Cluster_67 0.023 Archaeplastida Compare
Amborella trichopoda HCCA Cluster_164 0.022 Archaeplastida Compare
Amborella trichopoda HCCA Cluster_172 0.031 Archaeplastida Compare
Amborella trichopoda HCCA Cluster_190 0.029 Archaeplastida Compare
Amborella trichopoda HCCA Cluster_244 0.051 Archaeplastida Compare
Amborella trichopoda HCCA Cluster_256 0.03 Archaeplastida Compare
Gingko biloba HCCA Cluster_142 0.02 Archaeplastida Compare
Gingko biloba HCCA Cluster_213 0.041 Archaeplastida Compare
Gingko biloba HCCA Cluster_305 0.022 Archaeplastida Compare
Gingko biloba HCCA Cluster_329 0.019 Archaeplastida Compare
Zea mays HCCA Cluster_276 0.019 Archaeplastida Compare
Marchantia polymorpha HCCA Cluster_24 0.024 Archaeplastida Compare
Marchantia polymorpha HCCA Cluster_91 0.019 Archaeplastida Compare
Marchantia polymorpha HCCA Cluster_128 0.02 Archaeplastida Compare
Marchantia polymorpha HCCA Cluster_153 0.045 Archaeplastida Compare
Marchantia polymorpha HCCA Cluster_163 0.023 Archaeplastida Compare
Marchantia polymorpha HCCA Cluster_168 0.023 Archaeplastida Compare
Physcomitrella patens HCCA Cluster_55 0.025 Archaeplastida Compare
Physcomitrella patens HCCA Cluster_99 0.02 Archaeplastida Compare
Physcomitrella patens HCCA Cluster_169 0.022 Archaeplastida Compare
Physcomitrella patens HCCA Cluster_222 0.026 Archaeplastida Compare
Physcomitrella patens HCCA Cluster_261 0.033 Archaeplastida Compare
Physcomitrella patens HCCA Cluster_272 0.02 Archaeplastida Compare
Physcomitrella patens HCCA Cluster_290 0.03 Archaeplastida Compare
Picea abies HCCA Cluster_177 0.022 Archaeplastida Compare
Picea abies HCCA Cluster_239 0.019 Archaeplastida Compare
Picea abies HCCA Cluster_411 0.022 Archaeplastida Compare
Picea abies HCCA Cluster_434 0.022 Archaeplastida Compare
Oryza sativa HCCA Cluster_72 0.023 Archaeplastida Compare
Oryza sativa HCCA Cluster_168 0.024 Archaeplastida Compare
Oryza sativa HCCA Cluster_215 0.032 Archaeplastida Compare
Oryza sativa HCCA Cluster_219 0.04 Archaeplastida Compare
Oryza sativa HCCA Cluster_273 0.02 Archaeplastida Compare
Oryza sativa HCCA Cluster_286 0.024 Archaeplastida Compare
Oryza sativa HCCA Cluster_346 0.028 Archaeplastida Compare
Oryza sativa HCCA Cluster_353 0.03 Archaeplastida Compare
Selaginella moellendorffii HCCA Cluster_93 0.029 Archaeplastida Compare
Selaginella moellendorffii HCCA Cluster_125 0.022 Archaeplastida Compare
Solanum lycopersicum HCCA Cluster_79 0.02 Archaeplastida Compare
Solanum lycopersicum HCCA Cluster_158 0.022 Archaeplastida Compare
Solanum lycopersicum HCCA Cluster_159 0.021 Archaeplastida Compare
Solanum lycopersicum HCCA Cluster_173 0.023 Archaeplastida Compare
Solanum lycopersicum HCCA Cluster_250 0.02 Archaeplastida Compare
Solanum lycopersicum HCCA Cluster_252 0.021 Archaeplastida Compare
Solanum lycopersicum HCCA Cluster_260 0.027 Archaeplastida Compare
Vitis vinifera HCCA Cluster_62 0.019 Archaeplastida Compare
Vitis vinifera HCCA Cluster_119 0.022 Archaeplastida Compare
Vitis vinifera HCCA Cluster_167 0.038 Archaeplastida Compare
Vitis vinifera HCCA Cluster_171 0.021 Archaeplastida Compare
Vitis vinifera HCCA Cluster_181 0.025 Archaeplastida Compare
Vitis vinifera HCCA Cluster_218 0.033 Archaeplastida Compare
Vitis vinifera HCCA Cluster_233 0.021 Archaeplastida Compare
Vitis vinifera HCCA Cluster_238 0.028 Archaeplastida Compare
Chlamydomonas reinhardtii HCCA Cluster_125 0.021 Archaeplastida Compare
Chlamydomonas reinhardtii HCCA Cluster_163 0.039 Archaeplastida Compare
Sequences (84) (download table)

InterPro Domains

GO Terms

Family Terms