Zm00001e016088_P002

Description : cyclic nucleotide-gated cation channel (CNGC)

Gene families : OG0000137 (Archaeplastida) Phylogenetic Tree(s): OG0000137_tree ,
OG_05_0000296 (LandPlants) Phylogenetic Tree(s): OG_05_0000296_tree ,
OG_06_0001368 (SeedPlants) Phylogenetic Tree(s): OG_06_0001368_tree

Sequence : coding (download), protein (download)

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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.

Type	Description	Actions
Neighborhood	HRR: Zm00001e016088_P002
Cluster	HCCA: Cluster_355

Target	Alias	Description	ECC score	Gene Family Method
AMTR_s00053p00015490	evm_27.TU.AmTr_v1...	Solute transport.channels.VIC superfamily.cyclic...	0.03	Archaeplastida
Cpa\|evm.model.tig00000851.5	No alias	Putative cyclic nucleotide-gated ion channel 8...	0.02	Archaeplastida
Cpa\|evm.model.tig00021319.15	No alias	No description available	0.02	Archaeplastida
Gb_31623	No alias	cyclic nucleotide-gated cation channel (CNGC)	0.02	Archaeplastida
LOC_Os04g55080.1	No alias	cyclic nucleotide-gated cation channel (CNGC)	0.02	Archaeplastida
LOC_Os06g08850.1	No alias	cyclic nucleotide-gated cation channel (CNGC)	0.02	Archaeplastida
LOC_Os09g38580.1	No alias	cyclic nucleotide-gated cation channel (CNGC)	0.02	Archaeplastida
MA_10437079g0010	No alias	cyclic nucleotide-gated cation channel (CNGC)	0.03	Archaeplastida
Mp6g01920.1	No alias	cyclic nucleotide-gated cation channel (CNGC)	0.03	Archaeplastida
Solyc03g007260.3.1	No alias	cyclic nucleotide-gated cation channel (CNGC)	0.03	Archaeplastida
Solyc03g098210.4.1	No alias	cyclic nucleotide-gated cation channel (CNGC)	0.03	Archaeplastida
Solyc05g050360.3.1	No alias	cyclic nucleotide-gated cation channel (CNGC)	0.02	Archaeplastida
Solyc07g005590.3.1	No alias	cyclic nucleotide-gated cation channel (CNGC)	0.04	Archaeplastida
Solyc07g006510.3.1	No alias	cyclic nucleotide-gated cation channel (CNGC)	0.02	Archaeplastida
Solyc12g010010.2.1	No alias	cyclic nucleotide-gated cation channel (CNGC)	0.02	Archaeplastida
Zm00001e005735_P001	No alias	no hits & (original description: none)	0.03	Archaeplastida

Type	GO Term	Name	Evidence	Source
MF	GO:0003674	molecular_function	None	Extended
MF	GO:0005215	transporter activity	None	Extended
MF	GO:0005216	ion channel activity	IEA	Interproscan
CC	GO:0005575	cellular_component	None	Extended
BP	GO:0006810	transport	None	Extended
BP	GO:0006811	ion transport	IEA	Interproscan
BP	GO:0008150	biological_process	None	Extended
MF	GO:0015075	ion transmembrane transporter activity	None	Extended
MF	GO:0015267	channel activity	None	Extended
MF	GO:0015318	inorganic molecular entity transmembrane transporter activity	None	Extended
CC	GO:0016020	membrane	IEA	Interproscan
MF	GO:0022803	passive transmembrane transporter activity	None	Extended
MF	GO:0022838	substrate-specific channel activity	None	Extended
MF	GO:0022857	transmembrane transporter activity	None	Extended
BP	GO:0051179	localization	None	Extended
BP	GO:0051234	establishment of localization	None	Extended
BP	GO:0055085	transmembrane transport	IEA	Interproscan

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Type	GO Term	Name	Evidence	Source
MF	GO:0000155	phosphorelay sensor kinase activity	IEP	Neighborhood
CC	GO:0000159	protein phosphatase type 2A complex	IEP	Neighborhood
MF	GO:0003712	transcription coregulator activity	IEP	Neighborhood
MF	GO:0003714	transcription corepressor activity	IEP	Neighborhood
MF	GO:0003824	catalytic activity	IEP	Neighborhood
MF	GO:0004553	hydrolase activity, hydrolyzing O-glycosyl compounds	IEP	Neighborhood
MF	GO:0004559	alpha-mannosidase activity	IEP	Neighborhood
MF	GO:0004571	mannosyl-oligosaccharide 1,2-alpha-mannosidase activity	IEP	Neighborhood
MF	GO:0004673	protein histidine kinase activity	IEP	Neighborhood
MF	GO:0005543	phospholipid binding	IEP	Neighborhood
CC	GO:0005737	cytoplasm	IEP	Neighborhood
BP	GO:0007165	signal transduction	IEP	Neighborhood
MF	GO:0008080	N-acetyltransferase activity	IEP	Neighborhood
CC	GO:0008287	protein serine/threonine phosphatase complex	IEP	Neighborhood
MF	GO:0015923	mannosidase activity	IEP	Neighborhood
MF	GO:0015924	mannosyl-oligosaccharide mannosidase activity	IEP	Neighborhood
MF	GO:0016407	acetyltransferase activity	IEP	Neighborhood
MF	GO:0016410	N-acyltransferase activity	IEP	Neighborhood
MF	GO:0016740	transferase activity	IEP	Neighborhood
MF	GO:0016765	transferase activity, transferring alkyl or aryl (other than methyl) groups	IEP	Neighborhood
MF	GO:0016775	phosphotransferase activity, nitrogenous group as acceptor	IEP	Neighborhood
MF	GO:0016787	hydrolase activity	IEP	Neighborhood
MF	GO:0016798	hydrolase activity, acting on glycosyl bonds	IEP	Neighborhood
MF	GO:0019208	phosphatase regulator activity	IEP	Neighborhood
CC	GO:0019867	outer membrane	IEP	Neighborhood
MF	GO:0019888	protein phosphatase regulator activity	IEP	Neighborhood
MF	GO:0033925	mannosyl-glycoprotein endo-beta-N-acetylglucosaminidase activity	IEP	Neighborhood
MF	GO:0035091	phosphatidylinositol binding	IEP	Neighborhood
MF	GO:0043167	ion binding	IEP	Neighborhood
CC	GO:1903293	phosphatase complex	IEP	Neighborhood

InterPro domains	Description	Start	Stop
IPR005821	Ion_trans_dom	83	407
IPR000595	cNMP-bd_dom	501	590

External Links

No external refs found!

Zm00001e016088_P002

Expression Profile

Co-expression Networks

Expression Context Conservation (ECC)

Functional Annotation