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AT3G21170


Description : F-box and associated interaction domains-containing protein


Gene families : OG0000467 (Archaeplastida) Phylogenetic Tree(s): OG0000467_tree ,
OG_05_0000234 (LandPlants) Phylogenetic Tree(s): OG_05_0000234_tree ,
OG_06_0000102 (SeedPlants) Phylogenetic Tree(s): OG_06_0000102_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: AT3G21170
Cluster HCCA: Cluster_97

Target Alias Description ECC score Gene Family Method Actions
AT1G32140 No alias F-box family protein 0.05 Archaeplastida
AT2G24510 No alias F-box associated ubiquitination effector family protein 0.05 Archaeplastida
AT2G33655 No alias F-box and associated interaction domains-containing protein 0.07 Archaeplastida
AT3G17570 No alias F-box and associated interaction domains-containing protein 0.04 Archaeplastida
AT3G19880 No alias F-box and associated interaction domains-containing protein 0.07 Archaeplastida
AT3G20030 No alias F-box and associated interaction domains-containing protein 0.03 Archaeplastida
AT4G33290 No alias F-box and associated interaction domains-containing protein 0.06 Archaeplastida
AT5G47300 No alias F-box and associated interaction domains-containing protein 0.05 Archaeplastida

Type GO Term Name Evidence Source
MF GO:0003674 molecular_function ND Interproscan
CC GO:0005737 cytoplasm ISM Interproscan
BP GO:0008150 biological_process ND Interproscan
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Type GO Term Name Evidence Source
CC GO:0005788 endoplasmic reticulum lumen IEP Neighborhood
CC GO:0031974 membrane-enclosed lumen IEP Neighborhood
CC GO:0043233 organelle lumen IEP Neighborhood
CC GO:0044432 endoplasmic reticulum part IEP Neighborhood
CC GO:0070013 intracellular organelle lumen IEP Neighborhood
InterPro domains Description Start Stop
IPR001810 F-box_dom 1 47
IPR006527 F-box-assoc_dom_typ1 221 386
No external refs found!