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  5. Zm00001e016357_P002

Zm00001e016357_P002


Description : G2-like GARP transcription factor


Gene families : OG0002570 (Archaeplastida) Phylogenetic Tree(s): OG0002570_tree ,
OG_05_0001939 (LandPlants) Phylogenetic Tree(s): OG_05_0001939_tree ,
OG_06_0005507 (SeedPlants) Phylogenetic Tree(s): OG_06_0005507_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Zm00001e016357_P002
Cluster HCCA: Cluster_148

Target Alias Description ECC score Gene Family Method Actions
AMTR_s00058p00133630 evm_27.TU.AmTr_v1... RNA biosynthesis.transcriptional activation.MYB... 0.06 Archaeplastida
AT5G44190 GPRI2, ATGLK2, GLK2 GOLDEN2-like 2 0.08 Archaeplastida
GSVIVT01013234001 No alias RNA biosynthesis.transcriptional activation.MYB... 0.03 Archaeplastida
GSVIVT01020604001 No alias RNA biosynthesis.transcriptional activation.MYB... 0.07 Archaeplastida
LOC_Os01g13740.1 No alias G2-like GARP transcription factor 0.07 Archaeplastida
LOC_Os06g24070.1 No alias G2-like GARP transcription factor 0.04 Archaeplastida
Smo428906 No alias RNA biosynthesis.transcriptional activation.MYB... 0.02 Archaeplastida

Type GO Term Name Evidence Source

No GO annotation available for this sequence
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Type GO Term Name Evidence Source
MF GO:0004497 monooxygenase activity IEP Neighborhood
MF GO:0005488 binding IEP Neighborhood
MF GO:0005515 protein binding IEP Neighborhood
CC GO:0005576 extracellular region IEP Neighborhood
CC GO:0005618 cell wall IEP Neighborhood
BP GO:0006633 fatty acid biosynthetic process IEP Neighborhood
BP GO:0008037 cell recognition IEP Neighborhood
MF GO:0008270 zinc ion binding IEP Neighborhood
MF GO:0010277 chlorophyllide a oxygenase [overall] activity IEP Neighborhood
MF GO:0016701 oxidoreductase activity, acting on single donors with incorporation of molecular oxygen IEP Neighborhood
MF GO:0016703 oxidoreductase activity, acting on single donors with incorporation of molecular oxygen, incorporation of one atom of oxygen (internal monooxygenases or internal mixed function oxidases) IEP Neighborhood
MF GO:0016762 xyloglucan:xyloglucosyl transferase activity IEP Neighborhood
CC GO:0030312 external encapsulating structure IEP Neighborhood
MF GO:0046914 transition metal ion binding IEP Neighborhood
MF GO:0046983 protein dimerization activity IEP Neighborhood
CC GO:0048046 apoplast IEP Neighborhood
BP GO:0048544 recognition of pollen IEP Neighborhood
MF GO:0051537 2 iron, 2 sulfur cluster binding IEP Neighborhood
MF GO:0071949 FAD binding IEP Neighborhood
InterPro domains Description Start Stop
IPR001005 SANT/Myb 187 236
No external refs found!