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  5. AT3G21330

AT3G21330


Description : basic helix-loop-helix (bHLH) DNA-binding superfamily protein


Gene families : OG0000092 (Archaeplastida) Phylogenetic Tree(s): OG0000092_tree ,
OG_05_0000040 (LandPlants) Phylogenetic Tree(s): OG_05_0000040_tree ,
OG_06_0000031 (SeedPlants) Phylogenetic Tree(s): OG_06_0000031_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: AT3G21330
Cluster HCCA: Cluster_150

Target Alias Description ECC score Gene Family Method Actions
AT1G27740 RSL4 root hair defective 6-like 4 0.04 Archaeplastida
AT1G66470 RHD6 ROOT HAIR DEFECTIVE6 0.07 Archaeplastida
AT2G14760 No alias basic helix-loop-helix (bHLH) DNA-binding superfamily protein 0.05 Archaeplastida
AT4G00120 GT140, IND1, IND, EDA33 basic helix-loop-helix (bHLH) DNA-binding superfamily protein 0.04 Archaeplastida
AT4G33880 RSL2 ROOT HAIR DEFECTIVE 6-LIKE 2 0.05 Archaeplastida
AT5G37800 ATRSL1, RSL1 RHD SIX-LIKE 1 0.05 Archaeplastida
AT5G43175 No alias basic helix-loop-helix (bHLH) DNA-binding superfamily protein 0.03 Archaeplastida
AT5G67110 ALC basic helix-loop-helix (bHLH) DNA-binding superfamily protein 0.04 Archaeplastida
GSVIVT01026516001 No alias RNA biosynthesis.transcriptional activation.bHLH... 0.01 Archaeplastida
Gb_27869 No alias transcription factor (bHLH) 0.06 Archaeplastida
LOC_Os01g02110.1 No alias transcription factor (bHLH) 0.02 Archaeplastida
LOC_Os01g61480.1 No alias transcription factor (bHLH) 0.04 Archaeplastida
LOC_Os03g10770.1 No alias transcription factor (bHLH) 0.05 Archaeplastida
LOC_Os03g42100.1 No alias transcription factor (bHLH) 0.02 Archaeplastida
LOC_Os03g56950.2 No alias transcription factor (bHLH). PIF red/far-red light... 0.02 Archaeplastida
LOC_Os05g04740.2 No alias transcription factor (bHLH) 0.02 Archaeplastida
LOC_Os05g46370.1 No alias transcription factor (bHLH) 0.03 Archaeplastida
LOC_Os06g06900.1 No alias transcription factor (bHLH) 0.03 Archaeplastida
LOC_Os06g47980.1 No alias no hits & (original description: none) 0.02 Archaeplastida
LOC_Os07g39940.1 No alias transcription factor (bHLH) 0.02 Archaeplastida
LOC_Os08g36740.1 No alias transcription factor (bHLH) 0.03 Archaeplastida
LOC_Os09g28210.1 No alias transcription factor (bHLH) 0.03 Archaeplastida
LOC_Os10g40740.1 No alias transcription factor (bHLH) 0.02 Archaeplastida
LOC_Os12g39850.1 No alias transcription factor (bHLH) 0.04 Archaeplastida
MA_10113879g0010 No alias no hits & (original description: none) 0.03 Archaeplastida
MA_306658g0010 No alias transcription factor (bHLH) 0.03 Archaeplastida
MA_83500g0010 No alias transcription factor (bHLH) 0.05 Archaeplastida
Mp5g09710.1 No alias transcription factor (bHLH) 0.02 Archaeplastida
Mp6g21470.1 No alias transcription factor (bHLH) 0.03 Archaeplastida
Pp3c14_16620V3.1 No alias basic helix-loop-helix (bHLH) DNA-binding superfamily protein 0.02 Archaeplastida
Pp3c17_15380V3.1 No alias basic helix-loop-helix (bHLH) DNA-binding superfamily protein 0.03 Archaeplastida
Pp3c25_13740V3.1 No alias basic helix-loop-helix (bHLH) DNA-binding superfamily protein 0.02 Archaeplastida
Smo405220 No alias RNA biosynthesis.transcriptional activation.bHLH... 0.01 Archaeplastida
Solyc01g107140.3.1 No alias transcription factor (bHLH) 0.03 Archaeplastida
Solyc02g091440.2.1 No alias transcription factor (bHLH) 0.04 Archaeplastida
Solyc02g093280.2.1 No alias transcription factor (bHLH) 0.06 Archaeplastida
Solyc04g078790.3.1 No alias transcription factor (bHLH) 0.01 Archaeplastida
Solyc09g005070.1.1 No alias transcription factor (bHLH) 0.03 Archaeplastida
Solyc11g005780.3.1 No alias transcription factor (bHLH) 0.03 Archaeplastida
Solyc12g088380.1.1 No alias transcription factor (bHLH) 0.03 Archaeplastida
Solyc12g088790.3.1 No alias transcription factor (bHLH) 0.03 Archaeplastida
Zm00001e005046_P003 No alias transcription factor (bHLH). PIF red/far-red light... 0.03 Archaeplastida
Zm00001e015610_P001 No alias transcription factor (bHLH) 0.03 Archaeplastida
Zm00001e019392_P001 No alias transcription factor (bHLH) 0.04 Archaeplastida
Zm00001e020012_P001 No alias transcription factor (bHLH) 0.03 Archaeplastida
Zm00001e020477_P001 No alias transcription factor (bHLH) 0.02 Archaeplastida
Zm00001e021883_P001 No alias transcription factor (bHLH) 0.05 Archaeplastida
Zm00001e027758_P002 No alias transcription factor (bHLH) 0.06 Archaeplastida
Zm00001e029147_P001 No alias transcription factor (bHLH) 0.02 Archaeplastida
Zm00001e035422_P001 No alias transcription factor (bHLH) 0.05 Archaeplastida
Zm00001e038765_P001 No alias transcription factor (bHLH) 0.06 Archaeplastida

Type GO Term Name Evidence Source
MF GO:0003677 DNA binding ISS Interproscan
MF GO:0003700 DNA-binding transcription factor activity ISS Interproscan
CC GO:0005634 nucleus ISM Interproscan
BP GO:0006355 regulation of transcription, DNA-templated TAS Interproscan
Toggle parental
Type GO Term Name Evidence Source
BP GO:0000412 histone peptidyl-prolyl isomerization IEP Neighborhood
BP GO:0002832 negative regulation of response to biotic stimulus IEP Neighborhood
MF GO:0004673 protein histidine kinase activity IEP Neighborhood
MF GO:0004930 G-protein coupled receptor activity IEP Neighborhood
MF GO:0005496 steroid binding IEP Neighborhood
MF GO:0008020 G-protein coupled photoreceptor activity IEP Neighborhood
MF GO:0008142 oxysterol binding IEP Neighborhood
BP GO:0008154 actin polymerization or depolymerization IEP Neighborhood
MF GO:0008270 zinc ion binding IEP Neighborhood
BP GO:0009061 anaerobic respiration IEP Neighborhood
BP GO:0009314 response to radiation IEP Neighborhood
BP GO:0009416 response to light stimulus IEP Neighborhood
BP GO:0009593 detection of chemical stimulus IEP Neighborhood
BP GO:0009606 tropism IEP Neighborhood
BP GO:0009628 response to abiotic stimulus IEP Neighborhood
BP GO:0009629 response to gravity IEP Neighborhood
BP GO:0009630 gravitropism IEP Neighborhood
BP GO:0009638 phototropism IEP Neighborhood
BP GO:0009639 response to red or far red light IEP Neighborhood
BP GO:0009641 shade avoidance IEP Neighborhood
BP GO:0009647 skotomorphogenesis IEP Neighborhood
BP GO:0009704 de-etiolation IEP Neighborhood
BP GO:0009720 detection of hormone stimulus IEP Neighborhood
BP GO:0009726 detection of endogenous stimulus IEP Neighborhood
BP GO:0009727 detection of ethylene stimulus IEP Neighborhood
BP GO:0009740 gibberellic acid mediated signaling pathway IEP Neighborhood
MF GO:0009815 1-aminocyclopropane-1-carboxylate oxidase activity IEP Neighborhood
MF GO:0009881 photoreceptor activity IEP Neighborhood
MF GO:0009883 red or far-red light photoreceptor activity IEP Neighborhood
BP GO:0009894 regulation of catabolic process IEP Neighborhood
BP GO:0009896 positive regulation of catabolic process IEP Neighborhood
BP GO:0010017 red or far-red light signaling pathway IEP Neighborhood
BP GO:0010030 positive regulation of seed germination IEP Neighborhood
BP GO:0010114 response to red light IEP Neighborhood
BP GO:0010161 red light signaling pathway IEP Neighborhood
BP GO:0010201 response to continuous far red light stimulus by the high-irradiance response system IEP Neighborhood
BP GO:0010203 response to very low fluence red light stimulus IEP Neighborhood
BP GO:0010218 response to far red light IEP Neighborhood
MF GO:0010296 prenylcysteine methylesterase activity IEP Neighborhood
BP GO:0010345 suberin biosynthetic process IEP Neighborhood
BP GO:0010476 gibberellin mediated signaling pathway IEP Neighborhood
BP GO:0010500 transmitting tissue development IEP Neighborhood
BP GO:0010588 cotyledon vascular tissue pattern formation IEP Neighborhood
CC GO:0015629 actin cytoskeleton IEP Neighborhood
MF GO:0016491 oxidoreductase activity IEP Neighborhood
CC GO:0016604 nuclear body IEP Neighborhood
MF GO:0016627 oxidoreductase activity, acting on the CH-CH group of donors IEP Neighborhood
MF GO:0016630 protochlorophyllide reductase activity IEP Neighborhood
MF GO:0016775 phosphotransferase activity, nitrogenous group as acceptor IEP Neighborhood
BP GO:0017148 negative regulation of translation IEP Neighborhood
BP GO:0030041 actin filament polymerization IEP Neighborhood
BP GO:0030162 regulation of proteolysis IEP Neighborhood
BP GO:0030497 fatty acid elongation IEP Neighborhood
BP GO:0031331 positive regulation of cellular catabolic process IEP Neighborhood
MF GO:0031516 far-red light photoreceptor activity IEP Neighborhood
BP GO:0031537 regulation of anthocyanin metabolic process IEP Neighborhood
BP GO:0031539 positive regulation of anthocyanin metabolic process IEP Neighborhood
BP GO:0032102 negative regulation of response to external stimulus IEP Neighborhood
BP GO:0032434 regulation of proteasomal ubiquitin-dependent protein catabolic process IEP Neighborhood
BP GO:0032436 positive regulation of proteasomal ubiquitin-dependent protein catabolic process IEP Neighborhood
BP GO:0032507 maintenance of protein location in cell IEP Neighborhood
MF GO:0032934 sterol binding IEP Neighborhood
BP GO:0034249 negative regulation of cellular amide metabolic process IEP Neighborhood
BP GO:0042176 regulation of protein catabolic process IEP Neighborhood
MF GO:0043169 cation binding IEP Neighborhood
BP GO:0043901 negative regulation of multi-organism process IEP Neighborhood
CC GO:0044451 nucleoplasm part IEP Neighborhood
BP GO:0045185 maintenance of protein location IEP Neighborhood
BP GO:0045732 positive regulation of protein catabolic process IEP Neighborhood
BP GO:0045862 positive regulation of proteolysis IEP Neighborhood
BP GO:0046685 response to arsenic-containing substance IEP Neighborhood
MF GO:0046872 metal ion binding IEP Neighborhood
MF GO:0046914 transition metal ion binding IEP Neighborhood
MF GO:0047807 cytokinin 7-beta-glucosyltransferase activity IEP Neighborhood
BP GO:0048438 floral whorl development IEP Neighborhood
BP GO:0048444 floral organ morphogenesis IEP Neighborhood
BP GO:0048445 carpel morphogenesis IEP Neighborhood
BP GO:0048462 carpel formation IEP Neighborhood
BP GO:0048467 gynoecium development IEP Neighborhood
MF GO:0050062 long-chain-fatty-acyl-CoA reductase activity IEP Neighborhood
BP GO:0050896 response to stimulus IEP Neighborhood
BP GO:0051457 maintenance of protein location in nucleus IEP Neighborhood
BP GO:0051651 maintenance of location in cell IEP Neighborhood
MF GO:0051723 protein methylesterase activity IEP Neighborhood
BP GO:0055122 response to very low light intensity stimulus IEP Neighborhood
BP GO:0061136 regulation of proteasomal protein catabolic process IEP Neighborhood
BP GO:0070542 response to fatty acid IEP Neighborhood
BP GO:0071214 cellular response to abiotic stimulus IEP Neighborhood
BP GO:0071398 cellular response to fatty acid IEP Neighborhood
BP GO:0071478 cellular response to radiation IEP Neighborhood
BP GO:0071482 cellular response to light stimulus IEP Neighborhood
BP GO:0071489 cellular response to red or far red light IEP Neighborhood
BP GO:0071491 cellular response to red light IEP Neighborhood
BP GO:0072595 maintenance of protein localization in organelle IEP Neighborhood
MF GO:0080019 fatty-acyl-CoA reductase (alcohol-forming) activity IEP Neighborhood
MF GO:0080062 cytokinin 9-beta-glucosyltransferase activity IEP Neighborhood
BP GO:0080126 ovary septum development IEP Neighborhood
BP GO:0080167 response to karrikin IEP Neighborhood
BP GO:0090697 post-embryonic plant organ morphogenesis IEP Neighborhood
BP GO:0104004 cellular response to environmental stimulus IEP Neighborhood
BP GO:1900000 regulation of anthocyanin catabolic process IEP Neighborhood
BP GO:1900424 regulation of defense response to bacterium IEP Neighborhood
BP GO:1900425 negative regulation of defense response to bacterium IEP Neighborhood
BP GO:1901483 regulation of transcription factor catabolic process IEP Neighborhood
BP GO:1901485 positive regulation of transcription factor catabolic process IEP Neighborhood
BP GO:1901800 positive regulation of proteasomal protein catabolic process IEP Neighborhood
BP GO:1903050 regulation of proteolysis involved in cellular protein catabolic process IEP Neighborhood
BP GO:1903052 positive regulation of proteolysis involved in cellular protein catabolic process IEP Neighborhood
BP GO:1903362 regulation of cellular protein catabolic process IEP Neighborhood
BP GO:1903364 positive regulation of cellular protein catabolic process IEP Neighborhood
BP GO:1905328 plant septum development IEP Neighborhood
BP GO:2000058 regulation of ubiquitin-dependent protein catabolic process IEP Neighborhood
BP GO:2000060 positive regulation of ubiquitin-dependent protein catabolic process IEP Neighborhood
InterPro domains Description Start Stop
IPR011598 bHLH_dom 285 324
No external refs found!