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  5. Zm00001e016468_P001

Zm00001e016468_P001


Description : No annotation


Gene families : OG0003300 (Archaeplastida) Phylogenetic Tree(s): OG0003300_tree ,
OG_05_0003792 (LandPlants) Phylogenetic Tree(s): OG_05_0003792_tree ,
OG_06_0004547 (SeedPlants) Phylogenetic Tree(s): OG_06_0004547_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Zm00001e016468_P001
Cluster HCCA: Cluster_275

Target Alias Description ECC score Gene Family Method Actions
AT2G18740 No alias Small nuclear ribonucleoprotein family protein 0.09 Archaeplastida
AT4G30330 No alias Small nuclear ribonucleoprotein family protein 0.09 Archaeplastida
Cpa|evm.model.tig00020563.151 No alias RNA processing.RNA splicing.U1/U2/U4/U5-associated Sm... 0.04 Archaeplastida
Cre08.g385200 No alias RNA processing.RNA splicing.U1/U2/U4/U5-associated Sm... 0.05 Archaeplastida
GSVIVT01008301001 No alias RNA processing.RNA splicing.U1/U2/U4/U5-associated Sm... 0.06 Archaeplastida
LOC_Os02g03440.1 No alias component Sm-E of U1/U2/U4/U5-associated Sm accessory... 0.08 Archaeplastida
LOC_Os08g05530.1 No alias component Sm-E of U1/U2/U4/U5-associated Sm accessory... 0.07 Archaeplastida
MA_118124g0010 No alias component Sm-E of U1/U2/U4/U5-associated Sm accessory... 0.07 Archaeplastida
MA_63270g0010 No alias component Sm-E of U1/U2/U4/U5-associated Sm accessory... 0.03 Archaeplastida
Mp5g07450.1 No alias component Sm-E of U1/U2/U4/U5-associated Sm accessory... 0.06 Archaeplastida
Pp3c14_15210V3.1 No alias Small nuclear ribonucleoprotein family protein 0.12 Archaeplastida
Pp3c17_6070V3.1 No alias Small nuclear ribonucleoprotein family protein 0.03 Archaeplastida
Pp3c2_10270V3.1 No alias Small nuclear ribonucleoprotein family protein 0.04 Archaeplastida
Smo230895 No alias RNA processing.RNA splicing.U1/U2/U4/U5-associated Sm... 0.05 Archaeplastida
Solyc06g072280.3.1 No alias component Sm-E of U1/U2/U4/U5-associated Sm accessory... 0.02 Archaeplastida

Type GO Term Name Evidence Source

No GO annotation available for this sequence
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Type GO Term Name Evidence Source
MF GO:0003697 single-stranded DNA binding IEP Neighborhood
MF GO:0003735 structural constituent of ribosome IEP Neighborhood
MF GO:0005198 structural molecule activity IEP Neighborhood
CC GO:0005575 cellular_component IEP Neighborhood
CC GO:0005840 ribosome IEP Neighborhood
BP GO:0006259 DNA metabolic process IEP Neighborhood
BP GO:0006260 DNA replication IEP Neighborhood
BP GO:0006281 DNA repair IEP Neighborhood
BP GO:0006310 DNA recombination IEP Neighborhood
BP GO:0006412 translation IEP Neighborhood
BP GO:0006518 peptide metabolic process IEP Neighborhood
BP GO:0006807 nitrogen compound metabolic process IEP Neighborhood
BP GO:0006950 response to stress IEP Neighborhood
BP GO:0006974 cellular response to DNA damage stimulus IEP Neighborhood
BP GO:0008150 biological_process IEP Neighborhood
BP GO:0008152 metabolic process IEP Neighborhood
MF GO:0008168 methyltransferase activity IEP Neighborhood
MF GO:0008170 N-methyltransferase activity IEP Neighborhood
MF GO:0008276 protein methyltransferase activity IEP Neighborhood
BP GO:0009058 biosynthetic process IEP Neighborhood
BP GO:0009059 macromolecule biosynthetic process IEP Neighborhood
BP GO:0009987 cellular process IEP Neighborhood
MF GO:0016278 lysine N-methyltransferase activity IEP Neighborhood
MF GO:0016279 protein-lysine N-methyltransferase activity IEP Neighborhood
MF GO:0018024 histone-lysine N-methyltransferase activity IEP Neighborhood
BP GO:0019538 protein metabolic process IEP Neighborhood
MF GO:0019843 rRNA binding IEP Neighborhood
CC GO:0032991 protein-containing complex IEP Neighborhood
BP GO:0033554 cellular response to stress IEP Neighborhood
BP GO:0034641 cellular nitrogen compound metabolic process IEP Neighborhood
BP GO:0034645 cellular macromolecule biosynthetic process IEP Neighborhood
MF GO:0042054 histone methyltransferase activity IEP Neighborhood
BP GO:0043043 peptide biosynthetic process IEP Neighborhood
BP GO:0043170 macromolecule metabolic process IEP Neighborhood
CC GO:0043226 organelle IEP Neighborhood
CC GO:0043228 non-membrane-bounded organelle IEP Neighborhood
CC GO:0043229 intracellular organelle IEP Neighborhood
CC GO:0043232 intracellular non-membrane-bounded organelle IEP Neighborhood
BP GO:0043248 proteasome assembly IEP Neighborhood
BP GO:0043603 cellular amide metabolic process IEP Neighborhood
BP GO:0043604 amide biosynthetic process IEP Neighborhood
BP GO:0044237 cellular metabolic process IEP Neighborhood
BP GO:0044238 primary metabolic process IEP Neighborhood
BP GO:0044249 cellular biosynthetic process IEP Neighborhood
BP GO:0044260 cellular macromolecule metabolic process IEP Neighborhood
BP GO:0044267 cellular protein metabolic process IEP Neighborhood
BP GO:0044271 cellular nitrogen compound biosynthetic process IEP Neighborhood
CC GO:0044424 intracellular part IEP Neighborhood
CC GO:0044444 cytoplasmic part IEP Neighborhood
CC GO:0044464 cell part IEP Neighborhood
BP GO:0050896 response to stimulus IEP Neighborhood
BP GO:0051716 cellular response to stimulus IEP Neighborhood
BP GO:0071704 organic substance metabolic process IEP Neighborhood
BP GO:0090304 nucleic acid metabolic process IEP Neighborhood
BP GO:1901564 organonitrogen compound metabolic process IEP Neighborhood
BP GO:1901566 organonitrogen compound biosynthetic process IEP Neighborhood
BP GO:1901576 organic substance biosynthetic process IEP Neighborhood
CC GO:1990904 ribonucleoprotein complex IEP Neighborhood

No InterPro domains available for this sequence

No external refs found!