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  5. Zm00001e016505_P002

Zm00001e016505_P002


Description : subunit alpha of coat protein complex


Gene families : OG0002801 (Archaeplastida) Phylogenetic Tree(s): OG0002801_tree ,
OG_05_0002931 (LandPlants) Phylogenetic Tree(s): OG_05_0002931_tree ,
OG_06_0003184 (SeedPlants) Phylogenetic Tree(s): OG_06_0003184_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Zm00001e016505_P002
Cluster HCCA: Cluster_170

Target Alias Description ECC score Gene Family Method Actions
AMTR_s00001p00220200 evm_27.TU.AmTr_v1... Vesicle trafficking.Coat protein I (COPI) coatomer... 0.05 Archaeplastida
AT1G62020 No alias Coatomer, alpha subunit 0.1 Archaeplastida
AT2G21390 No alias Coatomer, alpha subunit 0.11 Archaeplastida
Cpa|evm.model.tig00000144.152 No alias Coatomer subunit alpha-3 OS=Oryza sativa subsp. japonica 0.03 Archaeplastida
Cre13.g565850 No alias Vesicle trafficking.Coat protein I (COPI) coatomer... 0.09 Archaeplastida
GSVIVT01009813001 No alias Vesicle trafficking.Coat protein I (COPI) coatomer... 0.06 Archaeplastida
Gb_09624 No alias subunit alpha of coat protein complex 0.11 Archaeplastida
Gb_15817 No alias subunit alpha of coat protein complex 0.05 Archaeplastida
LOC_Os03g50340.1 No alias subunit alpha of coat protein complex 0.07 Archaeplastida
LOC_Os03g50350.1 No alias subunit alpha of coat protein complex 0.08 Archaeplastida
LOC_Os09g04110.1 No alias subunit alpha of coat protein complex 0.08 Archaeplastida
MA_10428405g0010 No alias subunit alpha of coat protein complex 0.05 Archaeplastida
MA_10429054g0020 No alias subunit alpha of coat protein complex 0.02 Archaeplastida
MA_10429054g0030 No alias Coatomer subunit alpha-1 OS=Arabidopsis thaliana... 0.06 Archaeplastida
Mp3g00050.1 No alias subunit alpha of coat protein complex 0.15 Archaeplastida
Pp3c11_12600V3.1 No alias Coatomer, alpha subunit 0.08 Archaeplastida
Pp3c1_12990V3.1 No alias Coatomer, alpha subunit 0.07 Archaeplastida
Pp3c2_24120V3.1 No alias Coatomer, alpha subunit 0.04 Archaeplastida
Smo85610 No alias Vesicle trafficking.Coat protein I (COPI) coatomer... 0.03 Archaeplastida
Solyc04g080980.2.1 No alias subunit alpha of coat protein complex 0.09 Archaeplastida
Solyc07g032100.3.1 No alias subunit alpha of coat protein complex 0.08 Archaeplastida

Type GO Term Name Evidence Source
MF GO:0005198 structural molecule activity IEA Interproscan
MF GO:0005515 protein binding IEA Interproscan
BP GO:0006886 intracellular protein transport IEA Interproscan
BP GO:0016192 vesicle-mediated transport IEA Interproscan
CC GO:0030117 membrane coat IEA Interproscan
CC GO:0030126 COPI vesicle coat IEA Interproscan
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Type GO Term Name Evidence Source
MF GO:0000166 nucleotide binding IEP Neighborhood
CC GO:0000221 vacuolar proton-transporting V-type ATPase, V1 domain IEP Neighborhood
MF GO:0004386 helicase activity IEP Neighborhood
MF GO:0004559 alpha-mannosidase activity IEP Neighborhood
MF GO:0004571 mannosyl-oligosaccharide 1,2-alpha-mannosidase activity IEP Neighborhood
MF GO:0005085 guanyl-nucleotide exchange factor activity IEP Neighborhood
MF GO:0005086 ARF guanyl-nucleotide exchange factor activity IEP Neighborhood
MF GO:0005096 GTPase activator activity IEP Neighborhood
MF GO:0005524 ATP binding IEP Neighborhood
BP GO:0006811 ion transport IEP Neighborhood
BP GO:0006812 cation transport IEP Neighborhood
BP GO:0006888 ER to Golgi vesicle-mediated transport IEP Neighborhood
BP GO:0006891 intra-Golgi vesicle-mediated transport IEP Neighborhood
MF GO:0008047 enzyme activator activity IEP Neighborhood
MF GO:0008144 drug binding IEP Neighborhood
MF GO:0008536 Ran GTPase binding IEP Neighborhood
BP GO:0009966 regulation of signal transduction IEP Neighborhood
BP GO:0010646 regulation of cell communication IEP Neighborhood
BP GO:0015672 monovalent inorganic cation transport IEP Neighborhood
MF GO:0015923 mannosidase activity IEP Neighborhood
MF GO:0015924 mannosyl-oligosaccharide mannosidase activity IEP Neighborhood
MF GO:0016462 pyrophosphatase activity IEP Neighborhood
MF GO:0016746 transferase activity, transferring acyl groups IEP Neighborhood
MF GO:0016787 hydrolase activity IEP Neighborhood
MF GO:0016817 hydrolase activity, acting on acid anhydrides IEP Neighborhood
MF GO:0016818 hydrolase activity, acting on acid anhydrides, in phosphorus-containing anhydrides IEP Neighborhood
MF GO:0016887 ATPase activity IEP Neighborhood
MF GO:0017016 Ras GTPase binding IEP Neighborhood
MF GO:0017076 purine nucleotide binding IEP Neighborhood
MF GO:0017111 nucleoside-triphosphatase activity IEP Neighborhood
MF GO:0019829 cation-transporting ATPase activity IEP Neighborhood
MF GO:0019899 enzyme binding IEP Neighborhood
MF GO:0022853 active ion transmembrane transporter activity IEP Neighborhood
BP GO:0023051 regulation of signaling IEP Neighborhood
CC GO:0030127 COPII vesicle coat IEP Neighborhood
CC GO:0030173 integral component of Golgi membrane IEP Neighborhood
MF GO:0030554 adenyl nucleotide binding IEP Neighborhood
MF GO:0030695 GTPase regulator activity IEP Neighborhood
CC GO:0031228 intrinsic component of Golgi membrane IEP Neighborhood
MF GO:0031267 small GTPase binding IEP Neighborhood
CC GO:0031300 intrinsic component of organelle membrane IEP Neighborhood
CC GO:0031301 integral component of organelle membrane IEP Neighborhood
BP GO:0032012 regulation of ARF protein signal transduction IEP Neighborhood
MF GO:0032553 ribonucleotide binding IEP Neighborhood
MF GO:0032555 purine ribonucleotide binding IEP Neighborhood
MF GO:0032559 adenyl ribonucleotide binding IEP Neighborhood
CC GO:0033178 proton-transporting two-sector ATPase complex, catalytic domain IEP Neighborhood
CC GO:0033180 proton-transporting V-type ATPase, V1 domain IEP Neighborhood
BP GO:0034220 ion transmembrane transport IEP Neighborhood
MF GO:0035639 purine ribonucleoside triphosphate binding IEP Neighborhood
MF GO:0036094 small molecule binding IEP Neighborhood
MF GO:0036442 proton-exporting ATPase activity IEP Neighborhood
MF GO:0042625 ATPase coupled ion transmembrane transporter activity IEP Neighborhood
MF GO:0043167 ion binding IEP Neighborhood
MF GO:0043168 anion binding IEP Neighborhood
CC GO:0044437 vacuolar part IEP Neighborhood
MF GO:0044769 ATPase activity, coupled to transmembrane movement of ions, rotational mechanism IEP Neighborhood
BP GO:0046578 regulation of Ras protein signal transduction IEP Neighborhood
MF GO:0046961 proton-transporting ATPase activity, rotational mechanism IEP Neighborhood
BP GO:0048193 Golgi vesicle transport IEP Neighborhood
BP GO:0048583 regulation of response to stimulus IEP Neighborhood
MF GO:0051020 GTPase binding IEP Neighborhood
BP GO:0051056 regulation of small GTPase mediated signal transduction IEP Neighborhood
MF GO:0051539 4 iron, 4 sulfur cluster binding IEP Neighborhood
MF GO:0060589 nucleoside-triphosphatase regulator activity IEP Neighborhood
MF GO:0097367 carbohydrate derivative binding IEP Neighborhood
BP GO:0098655 cation transmembrane transport IEP Neighborhood
BP GO:0098660 inorganic ion transmembrane transport IEP Neighborhood
BP GO:0098662 inorganic cation transmembrane transport IEP Neighborhood
MF GO:0098772 molecular function regulator IEP Neighborhood
MF GO:1901265 nucleoside phosphate binding IEP Neighborhood
BP GO:1902531 regulation of intracellular signal transduction IEP Neighborhood
BP GO:1902600 proton transmembrane transport IEP Neighborhood
InterPro domains Description Start Stop
IPR006692 Coatomer_WD-assoc_reg 348 768
IPR010714 Coatomer_asu_C 815 1216
IPR001680 WD40_repeat 43 79
IPR001680 WD40_repeat 126 163
IPR001680 WD40_repeat 198 231
IPR001680 WD40_repeat 84 121
IPR001680 WD40_repeat 241 276
No external refs found!