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  5. AT3G22421

AT3G22421


Description : F-box and associated interaction domains-containing protein


Gene families : OG0000467 (Archaeplastida) Phylogenetic Tree(s): OG0000467_tree ,
OG_05_0000234 (LandPlants) Phylogenetic Tree(s): OG_05_0000234_tree ,
OG_06_0000102 (SeedPlants) Phylogenetic Tree(s): OG_06_0000102_tree

Sequence : coding (download), protein (download)


Attention: This gene has low abundance.


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: AT3G22421
Cluster HCCA: Cluster_27

Target Alias Description ECC score Gene Family Method Actions
AT1G11620 No alias F-box and associated interaction domains-containing protein 0.07 Archaeplastida
AT1G27490 No alias F-box and associated interaction domains-containing protein 0.03 Archaeplastida
AT1G32140 No alias F-box family protein 0.06 Archaeplastida
AT1G54550 No alias F-box and associated interaction domains-containing protein 0.07 Archaeplastida
AT1G59680 EDA1 F-box associated ubiquitination effector family protein 0.02 Archaeplastida
AT1G62270 No alias F-box and associated interaction domains-containing protein 0.08 Archaeplastida
AT1G66490 No alias F-box and associated interaction domains-containing protein 0.05 Archaeplastida
AT1G67455 No alias F-box and associated interaction domains-containing protein 0.04 Archaeplastida
AT2G24510 No alias F-box associated ubiquitination effector family protein 0.04 Archaeplastida
AT2G33655 No alias F-box and associated interaction domains-containing protein 0.03 Archaeplastida
AT2G38590 No alias F-box and associated interaction domains-containing protein 0.06 Archaeplastida
AT2G39355 No alias No description available 0.03 Archaeplastida
AT3G04250 No alias F-box associated ubiquitination effector family protein 0.03 Archaeplastida
AT3G13680 No alias F-box and associated interaction domains-containing protein 0.03 Archaeplastida
AT3G13830 No alias F-box and associated interaction domains-containing protein 0.11 Archaeplastida
AT3G16020 No alias F-box associated ubiquitination effector protein 0.02 Archaeplastida
AT3G17320 No alias F-box and associated interaction domains-containing protein 0.06 Archaeplastida
AT3G17500 No alias F-box family protein 0.08 Archaeplastida
AT3G17540 No alias F-box and associated interaction domains-containing protein 0.06 Archaeplastida
AT3G17560 No alias F-box and associated interaction domains-containing protein 0.06 Archaeplastida
AT3G17570 No alias F-box and associated interaction domains-containing protein 0.04 Archaeplastida
AT3G18120 No alias F-box associated ubiquitination effector family protein 0.04 Archaeplastida
AT3G18330 No alias F-box family protein 0.11 Archaeplastida
AT3G18910 ETP2 EIN2 targeting protein2 0.03 Archaeplastida
AT3G19410 No alias F-box and associated interaction domains-containing protein 0.02 Archaeplastida
AT3G19560 No alias F-box family protein 0.05 Archaeplastida
AT3G19880 No alias F-box and associated interaction domains-containing protein 0.05 Archaeplastida
AT3G19890 No alias F-box family protein 0.04 Archaeplastida
AT3G20690 No alias F-box and associated interaction domains-containing protein 0.09 Archaeplastida
AT3G20710 No alias F-box family protein 0.03 Archaeplastida
AT3G21120 No alias F-box and associated interaction domains-containing protein 0.07 Archaeplastida
AT3G22350 No alias F-box and associated interaction domains-containing protein 0.05 Archaeplastida
AT3G22700 No alias F-box and associated interaction domains-containing protein 0.08 Archaeplastida
AT3G22710 No alias F-box family protein 0.02 Archaeplastida
AT3G22730 No alias F-box and associated interaction domains-containing protein 0.06 Archaeplastida
AT3G22870 No alias F-box and associated interaction domains-containing protein 0.05 Archaeplastida
AT3G23680 No alias F-box associated ubiquitination effector family protein 0.03 Archaeplastida
AT3G24580 No alias F-box and associated interaction domains-containing protein 0.03 Archaeplastida
AT3G44120 No alias F-box and associated interaction domains-containing protein 0.03 Archaeplastida
AT3G49520 No alias F-box and associated interaction domains-containing protein 0.02 Archaeplastida
AT4G04690 No alias F-box and associated interaction domains-containing protein 0.02 Archaeplastida
AT4G09870 No alias F-box and associated interaction domains-containing protein 0.07 Archaeplastida
AT4G10740 No alias F-box and associated interaction domains-containing protein 0.09 Archaeplastida
AT4G17200 No alias F-box and associated interaction domains-containing protein 0.03 Archaeplastida
AT4G33290 No alias F-box and associated interaction domains-containing protein 0.05 Archaeplastida
AT5G36730 No alias F-box and associated interaction domains-containing protein 0.05 Archaeplastida
AT5G36820 No alias F-box and associated interaction domains-containing protein 0.05 Archaeplastida
AT5G41490 No alias F-box associated ubiquitination effector family protein 0.1 Archaeplastida
AT5G41500 No alias F-box and associated interaction domains-containing protein 0.08 Archaeplastida
AT5G41510 No alias F-box and associated interaction domains-containing protein 0.07 Archaeplastida
AT5G47300 No alias F-box and associated interaction domains-containing protein 0.06 Archaeplastida
AT5G62830 No alias F-box associated ubiquitination effector family protein 0.03 Archaeplastida

Type GO Term Name Evidence Source
MF GO:0003674 molecular_function ND Interproscan
CC GO:0005737 cytoplasm ISM Interproscan
BP GO:0008150 biological_process ND Interproscan
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Type GO Term Name Evidence Source
CC GO:0000151 ubiquitin ligase complex IEP Neighborhood
MF GO:0000156 phosphorelay response regulator activity IEP Neighborhood
MF GO:0003676 nucleic acid binding IEP Neighborhood
MF GO:0003700 DNA-binding transcription factor activity IEP Neighborhood
MF GO:0003883 CTP synthase activity IEP Neighborhood
MF GO:0004842 ubiquitin-protein transferase activity IEP Neighborhood
MF GO:0005488 binding IEP Neighborhood
MF GO:0005544 calcium-dependent phospholipid binding IEP Neighborhood
CC GO:0005634 nucleus IEP Neighborhood
BP GO:0006355 regulation of transcription, DNA-templated IEP Neighborhood
BP GO:0006511 ubiquitin-dependent protein catabolic process IEP Neighborhood
MF GO:0008270 zinc ion binding IEP Neighborhood
BP GO:0009736 cytokinin-activated signaling pathway IEP Neighborhood
CC GO:0019005 SCF ubiquitin ligase complex IEP Neighborhood
MF GO:0019787 ubiquitin-like protein transferase activity IEP Neighborhood
BP GO:0019941 modification-dependent protein catabolic process IEP Neighborhood
MF GO:0043167 ion binding IEP Neighborhood
MF GO:0043169 cation binding IEP Neighborhood
MF GO:0043565 sequence-specific DNA binding IEP Neighborhood
BP GO:0043632 modification-dependent macromolecule catabolic process IEP Neighborhood
MF GO:0045309 protein phosphorylated amino acid binding IEP Neighborhood
MF GO:0046872 metal ion binding IEP Neighborhood
MF GO:0051219 phosphoprotein binding IEP Neighborhood
BP GO:0051252 regulation of RNA metabolic process IEP Neighborhood
BP GO:0051603 proteolysis involved in cellular protein catabolic process IEP Neighborhood
MF GO:0060089 molecular transducer activity IEP Neighborhood
MF GO:0140110 transcription regulator activity IEP Neighborhood
BP GO:1903506 regulation of nucleic acid-templated transcription IEP Neighborhood
CC GO:1990234 transferase complex IEP Neighborhood
BP GO:2001141 regulation of RNA biosynthetic process IEP Neighborhood
InterPro domains Description Start Stop
IPR006527 F-box-assoc_dom_typ1 212 374
IPR001810 F-box_dom 4 42
No external refs found!