Zm00001e018703_P001

Description : Psb28 protein involved in PS-II assembly

Gene families : OG0006734 (Archaeplastida) Phylogenetic Tree(s): OG0006734_tree ,
OG_05_0007234 (LandPlants) Phylogenetic Tree(s): OG_05_0007234_tree ,
OG_06_0009684 (SeedPlants) Phylogenetic Tree(s): OG_06_0009684_tree

Sequence : coding (download), protein (download)

Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.

Type	Description	Actions
Neighborhood	HRR: Zm00001e018703_P001
Cluster	HCCA: Cluster_3

Target	Alias	Description	ECC score	Gene Family Method
AMTR_s00039p00160690	evm_27.TU.AmTr_v1...	Photosynthesis.photophosphorylation.photosystem...	0.04	Archaeplastida
AT4G28660	PSB28	photosystem II reaction center PSB28 protein	0.06	Archaeplastida
Cre10.g440450	No alias	Photosynthesis.photophosphorylation.photosystem...	0.05	Archaeplastida
GSVIVT01028434001	No alias	Photosynthesis.photophosphorylation.photosystem...	0.07	Archaeplastida
LOC_Os01g71190.1	No alias	Psb28 protein involved in PS-II assembly	0.07	Archaeplastida
MA_18349g0010	No alias	Psb28 protein involved in PS-II assembly	0.03	Archaeplastida
Mp2g14630.1	No alias	Psb28 protein involved in PS-II assembly	0.06	Archaeplastida
Pp3c7_5450V3.1	No alias	photosystem II reaction center PSB28 protein	0.07	Archaeplastida
Solyc09g064500.3.1	No alias	Psb28 protein involved in PS-II assembly	0.06	Archaeplastida

Type	GO Term	Name	Evidence	Source
CC	GO:0005575	cellular_component	None	Extended
BP	GO:0008150	biological_process	None	Extended
BP	GO:0008152	metabolic process	None	Extended
CC	GO:0009521	photosystem	None	Extended
CC	GO:0009523	photosystem II	IEA	Interproscan
CC	GO:0009654	photosystem II oxygen evolving complex	IEA	Interproscan
BP	GO:0009987	cellular process	None	Extended
BP	GO:0015979	photosynthesis	IEA	Interproscan
CC	GO:0016020	membrane	IEA	Interproscan
CC	GO:0032991	protein-containing complex	None	Extended
BP	GO:0044237	cellular metabolic process	None	Extended
CC	GO:0044424	intracellular part	None	Extended
CC	GO:0044425	membrane part	None	Extended
CC	GO:0044436	thylakoid part	None	Extended
CC	GO:0044464	cell part	None	Extended
CC	GO:0098796	membrane protein complex	None	Extended
CC	GO:1902494	catalytic complex	None	Extended
CC	GO:1990204	oxidoreductase complex	None	Extended

Type	GO Term	Name	Evidence	Source
MF	GO:0003824	catalytic activity	IEP	Neighborhood
MF	GO:0004089	carbonate dehydratase activity	IEP	Neighborhood
MF	GO:0004097	catechol oxidase activity	IEP	Neighborhood
MF	GO:0008168	methyltransferase activity	IEP	Neighborhood
MF	GO:0016491	oxidoreductase activity	IEP	Neighborhood
MF	GO:0016651	oxidoreductase activity, acting on NAD(P)H	IEP	Neighborhood
MF	GO:0016655	oxidoreductase activity, acting on NAD(P)H, quinone or similar compound as acceptor	IEP	Neighborhood
MF	GO:0016679	oxidoreductase activity, acting on diphenols and related substances as donors	IEP	Neighborhood
MF	GO:0016682	oxidoreductase activity, acting on diphenols and related substances as donors, oxygen as acceptor	IEP	Neighborhood
MF	GO:0016741	transferase activity, transferring one-carbon groups	IEP	Neighborhood
MF	GO:0016835	carbon-oxygen lyase activity	IEP	Neighborhood
MF	GO:0016836	hydro-lyase activity	IEP	Neighborhood
BP	GO:0032259	methylation	IEP	Neighborhood
MF	GO:0051536	iron-sulfur cluster binding	IEP	Neighborhood
MF	GO:0051537	2 iron, 2 sulfur cluster binding	IEP	Neighborhood
MF	GO:0051540	metal cluster binding	IEP	Neighborhood
BP	GO:0055114	oxidation-reduction process	IEP	Neighborhood

InterPro domains	Description	Start	Stop
IPR005610	PSII_Psb28_class-1	71	176

External Links

No external refs found!