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  5. Zm00001e019172_P001

Zm00001e019172_P001


Description : transcription factor (DOF)


Gene families : OG0000060 (Archaeplastida) Phylogenetic Tree(s): OG0000060_tree ,
OG_05_0000025 (LandPlants) Phylogenetic Tree(s): OG_05_0000025_tree ,
OG_06_0009080 (SeedPlants) Phylogenetic Tree(s): OG_06_0009080_tree

Sequence : coding (download), protein (download)


Attention: This gene has low abundance.


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Zm00001e019172_P001
Cluster HCCA: Cluster_197

Target Alias Description ECC score Gene Family Method Actions
AMTR_s00006p00248860 evm_27.TU.AmTr_v1... RNA biosynthesis.transcriptional activation.C2C2... 0.03 Archaeplastida
AMTR_s00010p00264070 evm_27.TU.AmTr_v1... RNA biosynthesis.transcriptional activation.C2C2... 0.03 Archaeplastida
AMTR_s00012p00176640 evm_27.TU.AmTr_v1... RNA biosynthesis.transcriptional activation.C2C2... 0.04 Archaeplastida
AMTR_s00021p00057700 evm_27.TU.AmTr_v1... RNA biosynthesis.transcriptional activation.C2C2... 0.02 Archaeplastida
AMTR_s00030p00153440 evm_27.TU.AmTr_v1... RNA biosynthesis.transcriptional activation.C2C2... 0.05 Archaeplastida
AMTR_s00058p00210070 evm_27.TU.AmTr_v1... RNA biosynthesis.transcriptional activation.C2C2... 0.04 Archaeplastida
AMTR_s00059p00213350 evm_27.TU.AmTr_v1... RNA biosynthesis.transcriptional activation.C2C2... 0.03 Archaeplastida
AMTR_s00080p00087770 evm_27.TU.AmTr_v1... RNA biosynthesis.transcriptional activation.C2C2... 0.02 Archaeplastida
AMTR_s00160p00046100 evm_27.TU.AmTr_v1... RNA biosynthesis.transcriptional activation.C2C2... 0.03 Archaeplastida
AMTR_s00169p00055880 evm_27.TU.AmTr_v1... RNA biosynthesis.transcriptional activation.C2C2... 0.03 Archaeplastida
AT1G07640 OBP2 Dof-type zinc finger DNA-binding family protein 0.04 Archaeplastida
AT1G21340 No alias Dof-type zinc finger DNA-binding family protein 0.03 Archaeplastida
AT2G28510 No alias Dof-type zinc finger DNA-binding family protein 0.03 Archaeplastida
AT2G28810 No alias Dof-type zinc finger DNA-binding family protein 0.03 Archaeplastida
AT2G34140 No alias Dof-type zinc finger DNA-binding family protein 0.05 Archaeplastida
AT2G37590 DOF2.4, ATDOF2.4 DNA binding with one finger 2.4 0.03 Archaeplastida
AT2G46590 DAG2 Dof-type zinc finger DNA-binding family protein 0.05 Archaeplastida
AT3G45610 No alias Dof-type zinc finger DNA-binding family protein 0.04 Archaeplastida
AT4G24060 No alias Dof-type zinc finger DNA-binding family protein 0.02 Archaeplastida
AT4G38000 DOF4.7 DNA binding with one finger 4.7 0.06 Archaeplastida
AT5G60200 TMO6 TARGET OF MONOPTEROS 6 0.07 Archaeplastida
AT5G65590 No alias Dof-type zinc finger DNA-binding family protein 0.05 Archaeplastida
AT5G66940 No alias Dof-type zinc finger DNA-binding family protein 0.03 Archaeplastida
GSVIVT01005057001 No alias RNA biosynthesis.transcriptional activation.C2C2... 0.05 Archaeplastida
GSVIVT01016538001 No alias RNA biosynthesis.transcriptional activation.C2C2... 0.04 Archaeplastida
GSVIVT01021085001 No alias RNA biosynthesis.transcriptional activation.C2C2... 0.04 Archaeplastida
GSVIVT01024986001 No alias RNA biosynthesis.transcriptional activation.C2C2... 0.04 Archaeplastida
GSVIVT01034189001 No alias RNA biosynthesis.transcriptional activation.C2C2... 0.04 Archaeplastida
Gb_20144 No alias transcription factor (DOF) 0.03 Archaeplastida
LOC_Os01g09720.1 No alias transcription factor (DOF) 0.05 Archaeplastida
LOC_Os01g15900.1 No alias transcription factor (DOF) 0.02 Archaeplastida
LOC_Os01g17000.1 No alias transcription factor (DOF) 0.02 Archaeplastida
LOC_Os02g15350.1 No alias transcription factor (DOF) 0.04 Archaeplastida
LOC_Os02g45200.1 No alias transcription factor (DOF) 0.04 Archaeplastida
LOC_Os02g47810.1 No alias transcription factor (DOF) 0.05 Archaeplastida
LOC_Os03g07360.1 No alias transcription factor (DOF) 0.03 Archaeplastida
LOC_Os03g16850.1 No alias transcription factor (DOF) 0.02 Archaeplastida
LOC_Os03g55610.1 No alias transcription factor (DOF) 0.02 Archaeplastida
LOC_Os03g60630.1 No alias transcription factor (DOF) 0.03 Archaeplastida
LOC_Os04g47990.1 No alias transcription factor (DOF) 0.04 Archaeplastida
LOC_Os04g58190.1 No alias transcription factor (DOF) 0.02 Archaeplastida
LOC_Os07g13260.1 No alias transcription factor (DOF) 0.03 Archaeplastida
LOC_Os08g38220.1 No alias transcription factor (DOF) 0.02 Archaeplastida
LOC_Os10g26620.1 No alias transcription factor (DOF) 0.02 Archaeplastida
MA_123810g0010 No alias transcription factor (DOF) 0.02 Archaeplastida
MA_16692g0010 No alias transcription factor (DOF) 0.04 Archaeplastida
MA_248613g0010 No alias No annotation 0.03 Archaeplastida
MA_459791g0010 No alias transcription factor (DOF) 0.03 Archaeplastida
MA_52474g0010 No alias no hits & (original description: none) 0.03 Archaeplastida
MA_56828g0010 No alias transcription factor (DOF) 0.03 Archaeplastida
MA_7537g0010 No alias transcription factor (DOF) 0.03 Archaeplastida
Mp1g18540.1 No alias no hits & (original description: none) 0.04 Archaeplastida
Mp2g20790.1 No alias transcription factor (DOF) 0.06 Archaeplastida
Pp3c13_2000V3.1 No alias cycling DOF factor 3 0.03 Archaeplastida
Pp3c15_3180V3.1 No alias cycling DOF factor 3 0.02 Archaeplastida
Pp3c16_6460V3.1 No alias cycling DOF factor 2 0.02 Archaeplastida
Pp3c17_3860V3.1 No alias OBF binding protein 4 0.02 Archaeplastida
Pp3c4_850V3.1 No alias cycling DOF factor 3 0.03 Archaeplastida
Pp3c9_4910V3.1 No alias cycling DOF factor 2 0.05 Archaeplastida
Solyc02g077950.3.1 No alias transcription factor (DOF) 0.04 Archaeplastida
Solyc02g077960.3.1 No alias transcription factor (DOF) 0.05 Archaeplastida
Solyc02g090220.3.1 No alias transcription factor (DOF) 0.03 Archaeplastida
Solyc03g112930.3.1 No alias transcription factor (DOF) 0.03 Archaeplastida
Solyc03g121400.1.1 No alias transcription factor (DOF) 0.04 Archaeplastida
Solyc04g070960.3.1 No alias transcription factor (DOF) 0.03 Archaeplastida
Solyc04g079570.1.1 No alias transcription factor (DOF) 0.02 Archaeplastida
Solyc06g062520.1.1 No alias transcription factor (DOF) 0.05 Archaeplastida
Solyc06g076030.3.1 No alias transcription factor (DOF) 0.05 Archaeplastida
Solyc08g082910.2.1 No alias transcription factor (DOF) 0.03 Archaeplastida
Solyc09g010680.3.1 No alias transcription factor (DOF) 0.03 Archaeplastida
Zm00001e002951_P002 No alias transcription factor (DOF) 0.03 Archaeplastida
Zm00001e004809_P001 No alias transcription factor (DOF) 0.03 Archaeplastida
Zm00001e005785_P001 No alias transcription factor (DOF) 0.05 Archaeplastida
Zm00001e006190_P001 No alias transcription factor (DOF) 0.03 Archaeplastida
Zm00001e010022_P001 No alias transcription factor (DOF) 0.03 Archaeplastida
Zm00001e012437_P001 No alias transcription factor (DOF) 0.03 Archaeplastida
Zm00001e012824_P001 No alias transcription factor (DOF) 0.04 Archaeplastida
Zm00001e015414_P004 No alias transcription factor (DOF) 0.03 Archaeplastida
Zm00001e023218_P004 No alias transcription factor (DOF) 0.05 Archaeplastida
Zm00001e034454_P001 No alias transcription factor (DOF) 0.03 Archaeplastida
Zm00001e035074_P001 No alias transcription factor (DOF) 0.03 Archaeplastida
Zm00001e038479_P002 No alias transcription factor (DOF) 0.02 Archaeplastida
Zm00001e041444_P001 No alias transcription factor (DOF) 0.06 Archaeplastida
Zm00001e041944_P001 No alias transcription factor (DOF) 0.04 Archaeplastida

Type GO Term Name Evidence Source
MF GO:0003677 DNA binding IEA Interproscan
BP GO:0006355 regulation of transcription, DNA-templated IEA Interproscan
Toggle parental
Type GO Term Name Evidence Source
MF GO:0003700 DNA-binding transcription factor activity IEP Neighborhood
MF GO:0005515 protein binding IEP Neighborhood
CC GO:0005575 cellular_component IEP Neighborhood
CC GO:0005634 nucleus IEP Neighborhood
BP GO:0006417 regulation of translation IEP Neighborhood
BP GO:0007275 multicellular organism development IEP Neighborhood
BP GO:0009719 response to endogenous stimulus IEP Neighborhood
BP GO:0009725 response to hormone IEP Neighborhood
BP GO:0009890 negative regulation of biosynthetic process IEP Neighborhood
BP GO:0009892 negative regulation of metabolic process IEP Neighborhood
BP GO:0010033 response to organic substance IEP Neighborhood
BP GO:0010558 negative regulation of macromolecule biosynthetic process IEP Neighborhood
BP GO:0010605 negative regulation of macromolecule metabolic process IEP Neighborhood
BP GO:0010608 posttranscriptional regulation of gene expression IEP Neighborhood
BP GO:0010629 negative regulation of gene expression IEP Neighborhood
MF GO:0015018 galactosylgalactosylxylosylprotein 3-beta-glucuronosyltransferase activity IEP Neighborhood
MF GO:0015020 glucuronosyltransferase activity IEP Neighborhood
CC GO:0016020 membrane IEP Neighborhood
MF GO:0016798 hydrolase activity, acting on glycosyl bonds IEP Neighborhood
MF GO:0016799 hydrolase activity, hydrolyzing N-glycosyl compounds IEP Neighborhood
BP GO:0017148 negative regulation of translation IEP Neighborhood
MF GO:0030597 RNA glycosylase activity IEP Neighborhood
MF GO:0030598 rRNA N-glycosylase activity IEP Neighborhood
BP GO:0031324 negative regulation of cellular metabolic process IEP Neighborhood
BP GO:0031327 negative regulation of cellular biosynthetic process IEP Neighborhood
BP GO:0032268 regulation of cellular protein metabolic process IEP Neighborhood
BP GO:0032269 negative regulation of cellular protein metabolic process IEP Neighborhood
BP GO:0032501 multicellular organismal process IEP Neighborhood
BP GO:0032502 developmental process IEP Neighborhood
BP GO:0034248 regulation of cellular amide metabolic process IEP Neighborhood
BP GO:0034249 negative regulation of cellular amide metabolic process IEP Neighborhood
BP GO:0042221 response to chemical IEP Neighborhood
CC GO:0043226 organelle IEP Neighborhood
CC GO:0043227 membrane-bounded organelle IEP Neighborhood
CC GO:0043229 intracellular organelle IEP Neighborhood
CC GO:0043231 intracellular membrane-bounded organelle IEP Neighborhood
CC GO:0044424 intracellular part IEP Neighborhood
CC GO:0044464 cell part IEP Neighborhood
MF GO:0046983 protein dimerization activity IEP Neighborhood
BP GO:0048523 negative regulation of cellular process IEP Neighborhood
BP GO:0048856 anatomical structure development IEP Neighborhood
BP GO:0050896 response to stimulus IEP Neighborhood
BP GO:0051172 negative regulation of nitrogen compound metabolic process IEP Neighborhood
BP GO:0051246 regulation of protein metabolic process IEP Neighborhood
BP GO:0051248 negative regulation of protein metabolic process IEP Neighborhood
MF GO:0140102 catalytic activity, acting on a rRNA IEP Neighborhood
MF GO:0140110 transcription regulator activity IEP Neighborhood
BP GO:2000113 negative regulation of cellular macromolecule biosynthetic process IEP Neighborhood
InterPro domains Description Start Stop
IPR003851 Znf_Dof 36 90
No external refs found!