1. Home
  2. Species
  3. Zea mays
  4. Sequence
  5. Zm00001e019705_P002

Zm00001e019705_P002


Description : CRWN nuclear lamina lamin-like protein


Gene families : OG0002164 (Archaeplastida) Phylogenetic Tree(s): OG0002164_tree ,
OG_05_0001522 (LandPlants) Phylogenetic Tree(s): OG_05_0001522_tree ,
OG_06_0001206 (SeedPlants) Phylogenetic Tree(s): OG_06_0001206_tree

Sequence : coding (download), protein (download)


Download

Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Zm00001e019705_P002
Cluster HCCA: Cluster_103

Target Alias Description ECC score Gene Family Method Actions
AMTR_s00024p00252300 evm_27.TU.AmTr_v1... Cytoskeleton.cytoskeleton-nucleoskeleton linking.nuclear... 0.03 Archaeplastida
AMTR_s00044p00204550 evm_27.TU.AmTr_v1... Cytoskeleton.cytoskeleton-nucleoskeleton linking.nuclear... 0.03 Archaeplastida
AT1G13220 LINC2 nuclear matrix constituent protein-related 0.03 Archaeplastida
AT1G67230 LINC1 little nuclei1 0.06 Archaeplastida
AT1G68790 LINC3 little nuclei3 0.06 Archaeplastida
AT5G65770 LINC4 little nuclei4 0.14 Archaeplastida
AT5G65780 ATBCAT-5 branched-chain amino acid aminotransferase 5 /... 0.11 Archaeplastida
GSVIVT01007428001 No alias Cytoskeleton.cytoskeleton-nucleoskeleton linking.nuclear... 0.02 Archaeplastida
GSVIVT01011972001 No alias Cytoskeleton.cytoskeleton-nucleoskeleton linking.nuclear... 0.06 Archaeplastida
GSVIVT01031076001 No alias Cytoskeleton.cytoskeleton-nucleoskeleton linking.nuclear... 0.05 Archaeplastida
LOC_Os01g56140.1 No alias CRWN nuclear lamina lamin-like protein 0.07 Archaeplastida
LOC_Os02g48010.1 No alias CRWN nuclear lamina lamin-like protein 0.07 Archaeplastida
MA_51629g0010 No alias CRWN nuclear lamina lamin-like protein 0.03 Archaeplastida
Mp3g21160.1 No alias CRWN nuclear lamina lamin-like protein 0.03 Archaeplastida
Pp3c1_1360V3.1 No alias little nuclei1 0.02 Archaeplastida
Solyc02g089800.3.1 No alias CRWN nuclear lamina lamin-like protein 0.06 Archaeplastida
Solyc02g091960.4.1 No alias CRWN nuclear lamina lamin-like protein 0.1 Archaeplastida
Solyc03g045050.4.1 No alias CRWN nuclear lamina lamin-like protein 0.03 Archaeplastida

Type GO Term Name Evidence Source

No GO annotation available for this sequence
Toggle parental
Type GO Term Name Evidence Source
MF GO:0000166 nucleotide binding IEP Neighborhood
MF GO:0003682 chromatin binding IEP Neighborhood
CC GO:0005667 transcription factor complex IEP Neighborhood
CC GO:0005694 chromosome IEP Neighborhood
BP GO:0006325 chromatin organization IEP Neighborhood
BP GO:0006338 chromatin remodeling IEP Neighborhood
BP GO:0006397 mRNA processing IEP Neighborhood
BP GO:0006996 organelle organization IEP Neighborhood
BP GO:0009892 negative regulation of metabolic process IEP Neighborhood
BP GO:0010605 negative regulation of macromolecule metabolic process IEP Neighborhood
BP GO:0010629 negative regulation of gene expression IEP Neighborhood
BP GO:0016043 cellular component organization IEP Neighborhood
BP GO:0016071 mRNA metabolic process IEP Neighborhood
BP GO:0016458 gene silencing IEP Neighborhood
MF GO:0016817 hydrolase activity, acting on acid anhydrides IEP Neighborhood
MF GO:0016818 hydrolase activity, acting on acid anhydrides, in phosphorus-containing anhydrides IEP Neighborhood
MF GO:0017076 purine nucleotide binding IEP Neighborhood
BP GO:0031047 gene silencing by RNA IEP Neighborhood
MF GO:0031491 nucleosome binding IEP Neighborhood
MF GO:0032553 ribonucleotide binding IEP Neighborhood
MF GO:0032555 purine ribonucleotide binding IEP Neighborhood
MF GO:0035639 purine ribonucleoside triphosphate binding IEP Neighborhood
MF GO:0036094 small molecule binding IEP Neighborhood
BP GO:0043044 ATP-dependent chromatin remodeling IEP Neighborhood
MF GO:0043168 anion binding IEP Neighborhood
CC GO:0044424 intracellular part IEP Neighborhood
CC GO:0044464 cell part IEP Neighborhood
MF GO:0044877 protein-containing complex binding IEP Neighborhood
BP GO:0048519 negative regulation of biological process IEP Neighborhood
BP GO:0051276 chromosome organization IEP Neighborhood
BP GO:0071840 cellular component organization or biogenesis IEP Neighborhood
MF GO:0097367 carbohydrate derivative binding IEP Neighborhood
MF GO:1901265 nucleoside phosphate binding IEP Neighborhood

No InterPro domains available for this sequence

No external refs found!