Zm00001e019898_P001

Description : transcription factor (HSF)

Gene families : OG0000090 (Archaeplastida) Phylogenetic Tree(s): OG0000090_tree ,
OG_05_0021303 (LandPlants) Phylogenetic Tree(s): No tree available for this family ,
OG_06_0020557 (SeedPlants) Phylogenetic Tree(s): No tree available for this family

Sequence : coding (download), protein (download)

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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.

Type	Description	Actions
Neighborhood	HRR: Zm00001e019898_P001
Cluster	HCCA: Cluster_452

Target	Alias	Description	ECC score	Gene Family Method
AMTR_s00002p00270580	evm_27.TU.AmTr_v1...	RNA biosynthesis.transcriptional activation.HSF (heat...	0.02	Archaeplastida
AT4G36990	HSF4, HSFB1,...	heat shock factor 4	0.03	Archaeplastida
AT5G54070	AT-HSFA9, HSFA9	heat shock transcription factor A9	0.06	Archaeplastida
LOC_Os01g39020.1	No alias	transcription factor (HSF)	0.07	Archaeplastida
LOC_Os02g13800.1	No alias	transcription factor (HSF)	0.12	Archaeplastida
LOC_Os06g35960.1	No alias	transcription factor (HSF)	0.03	Archaeplastida
LOC_Os08g43334.1	No alias	transcription factor (HSF)	0.14	Archaeplastida
Pp3c18_9360V3.1	No alias	heat shock transcription factor B4	0.02	Archaeplastida
Solyc02g090820.3.1	No alias	transcription factor (HSF)	0.02	Archaeplastida
Solyc03g026020.3.1	No alias	transcription factor (HSF)	0.04	Archaeplastida
Solyc07g040680.3.1	No alias	transcription factor (HSF)	0.06	Archaeplastida

Type	GO Term	Name	Evidence	Source
MF	GO:0003674	molecular_function	None	Extended
MF	GO:0003676	nucleic acid binding	None	Extended
MF	GO:0003677	DNA binding	None	Extended
MF	GO:0003700	DNA-binding transcription factor activity	IEA	Interproscan
MF	GO:0005488	binding	None	Extended
CC	GO:0005575	cellular_component	None	Extended
BP	GO:0006355	regulation of transcription, DNA-templated	IEA	Interproscan
BP	GO:0008150	biological_process	None	Extended
BP	GO:0009889	regulation of biosynthetic process	None	Extended
BP	GO:0010468	regulation of gene expression	None	Extended
BP	GO:0010556	regulation of macromolecule biosynthetic process	None	Extended
BP	GO:0019219	regulation of nucleobase-containing compound metabolic process	None	Extended
BP	GO:0019222	regulation of metabolic process	None	Extended
BP	GO:0031323	regulation of cellular metabolic process	None	Extended
BP	GO:0031326	regulation of cellular biosynthetic process	None	Extended
CC	GO:0033643	host cell part	None	Extended
CC	GO:0033646	host intracellular part	None	Extended
CC	GO:0033647	host intracellular organelle	None	Extended
CC	GO:0033648	host intracellular membrane-bounded organelle	None	Extended
CC	GO:0042025	host cell nucleus	IEA	Interproscan
MF	GO:0043565	sequence-specific DNA binding	IEA	Interproscan
CC	GO:0044217	other organism part	None	Extended
BP	GO:0050789	regulation of biological process	None	Extended
BP	GO:0050794	regulation of cellular process	None	Extended
BP	GO:0051171	regulation of nitrogen compound metabolic process	None	Extended
BP	GO:0051252	regulation of RNA metabolic process	None	Extended
BP	GO:0060255	regulation of macromolecule metabolic process	None	Extended
BP	GO:0065007	biological regulation	None	Extended
BP	GO:0080090	regulation of primary metabolic process	None	Extended
MF	GO:0097159	organic cyclic compound binding	None	Extended
MF	GO:0140110	transcription regulator activity	None	Extended
MF	GO:1901363	heterocyclic compound binding	None	Extended
BP	GO:1903506	regulation of nucleic acid-templated transcription	None	Extended
BP	GO:2000112	regulation of cellular macromolecule biosynthetic process	None	Extended
BP	GO:2001141	regulation of RNA biosynthetic process	None	Extended

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Type	GO Term	Name	Evidence	Source
BP	GO:0001101	response to acid chemical	IEP	Neighborhood
BP	GO:0009415	response to water	IEP	Neighborhood
BP	GO:0009628	response to abiotic stimulus	IEP	Neighborhood
BP	GO:0010035	response to inorganic substance	IEP	Neighborhood
BP	GO:0010167	response to nitrate	IEP	Neighborhood
BP	GO:0015706	nitrate transport	IEP	Neighborhood
BP	GO:0042221	response to chemical	IEP	Neighborhood
BP	GO:0050896	response to stimulus	IEP	Neighborhood
BP	GO:1901698	response to nitrogen compound	IEP	Neighborhood
BP	GO:1901700	response to oxygen-containing compound	IEP	Neighborhood

InterPro domains	Description	Start	Stop
IPR000232	HSF_DNA-bd	30	119

External Links

No external refs found!

Zm00001e019898_P001

Expression Profile

Co-expression Networks

Expression Context Conservation (ECC)

Functional Annotation