1. Home
  2. Species
  3. Zea mays
  4. Sequence
  5. Zm00001e020567_P001

Zm00001e020567_P001


Description : RNA editing factor (MEF7)


Gene families : OG0000000 (Archaeplastida) Phylogenetic Tree(s): No tree available for this family ,
OG_05_0000000 (LandPlants) Phylogenetic Tree(s): OG_05_0000000_tree ,
OG_06_0000000 (SeedPlants) Phylogenetic Tree(s): OG_06_0000000_tree

Sequence : coding (download), protein (download)


Attention: This gene has low abundance.


Download

Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Zm00001e020567_P001
Cluster HCCA: Cluster_6

Target Alias Description ECC score Gene Family Method Actions
AMTR_s00002p00266930 No alias Pentatricopeptide repeat-containing protein At4g02750... 0.02 Archaeplastida
AMTR_s00003p00263110 No alias Pentatricopeptide repeat-containing protein At1g03540... 0.03 Archaeplastida
AMTR_s00010p00246970 evm_27.TU.AmTr_v1... Pentatricopeptide repeat-containing protein At4g39530... 0.04 Archaeplastida
AMTR_s00011p00266560 evm_27.TU.AmTr_v1... RNA processing.organelle machineries.RNA... 0.02 Archaeplastida
AMTR_s00014p00068600 evm_27.TU.AmTr_v1... Pentatricopeptide repeat-containing protein At1g43980,... 0.03 Archaeplastida
AMTR_s00014p00090010 evm_27.TU.AmTr_v1... Pentatricopeptide repeat-containing protein At2g13600... 0.02 Archaeplastida
AMTR_s00032p00190360 evm_27.TU.AmTr_v1... Pentatricopeptide repeat-containing protein At2g13600... 0.04 Archaeplastida
AMTR_s00038p00071780 evm_27.TU.AmTr_v1... Pentatricopeptide repeat-containing protein At3g26540... 0.02 Archaeplastida
AMTR_s00039p00210570 No alias Pentatricopeptide repeat-containing protein At3g12770... 0.08 Archaeplastida
AMTR_s00044p00169670 evm_27.TU.AmTr_v1... Pentatricopeptide repeat-containing protein At2g17210... 0.03 Archaeplastida
AMTR_s00060p00130100 evm_27.TU.AmTr_v1... Pentatricopeptide repeat-containing protein At3g02330,... 0.02 Archaeplastida
AMTR_s00061p00127300 evm_27.TU.AmTr_v1... Pentatricopeptide repeat-containing protein At3g12770... 0.04 Archaeplastida
AMTR_s00063p00172440 evm_27.TU.AmTr_v1... Pentatricopeptide repeat-containing protein At4g13650... 0.02 Archaeplastida
AMTR_s00065p00033910 evm_27.TU.AmTr_v1... Pentatricopeptide repeat-containing protein At3g49740... 0.04 Archaeplastida
AMTR_s00078p00125150 No alias Pentatricopeptide repeat-containing protein At2g02750... 0.03 Archaeplastida
AMTR_s00081p00019740 evm_27.TU.AmTr_v1... Pentatricopeptide repeat-containing protein At5g27110... 0.04 Archaeplastida
AMTR_s00092p00078040 No alias Pentatricopeptide repeat-containing protein At4g35130,... 0.04 Archaeplastida
AMTR_s00099p00036710 evm_27.TU.AmTr_v1... Pentatricopeptide repeat-containing protein At1g71490... 0.03 Archaeplastida
AMTR_s00103p00160020 evm_27.TU.AmTr_v1... Pentatricopeptide repeat-containing protein DOT4,... 0.03 Archaeplastida
AMTR_s00109p00094190 evm_27.TU.AmTr_v1... Pentatricopeptide repeat-containing protein At5g04780,... 0.02 Archaeplastida
AMTR_s00122p00115170 No alias RNA processing.organelle machineries.RNA... 0.04 Archaeplastida
AMTR_s00130p00019530 evm_27.TU.AmTr_v1... Pentatricopeptide repeat-containing protein DOT4,... 0.02 Archaeplastida
AMTR_s00147p00097570 evm_27.TU.AmTr_v1... Pentatricopeptide repeat-containing protein At2g03880,... 0.03 Archaeplastida
AMTR_s00170p00032020 evm_27.TU.AmTr_v1... Pentatricopeptide repeat-containing protein At5g16860... 0.02 Archaeplastida
AT1G03540 No alias Pentatricopeptide repeat (PPR-like) superfamily protein 0.04 Archaeplastida
AT1G06140 No alias Pentatricopeptide repeat (PPR) superfamily protein 0.04 Archaeplastida
AT1G11290 CRR22 Pentatricopeptide repeat (PPR) superfamily protein 0.02 Archaeplastida
AT1G56570 No alias Tetratricopeptide repeat (TPR)-like superfamily protein 0.03 Archaeplastida
AT1G68930 No alias pentatricopeptide (PPR) repeat-containing protein 0.04 Archaeplastida
AT1G69350 No alias Tetratricopeptide repeat (TPR)-like superfamily protein 0.05 Archaeplastida
AT1G71490 No alias Tetratricopeptide repeat (TPR)-like superfamily protein 0.02 Archaeplastida
AT2G02750 No alias Pentatricopeptide repeat (PPR) superfamily protein 0.04 Archaeplastida
AT2G03380 No alias Pentatricopeptide repeat (PPR) superfamily protein 0.05 Archaeplastida
AT2G04860 No alias Tetratricopeptide repeat (TPR)-like superfamily protein 0.05 Archaeplastida
AT2G22070 No alias pentatricopeptide (PPR) repeat-containing protein 0.03 Archaeplastida
AT2G22410 SLO1 SLOW GROWTH 1 0.06 Archaeplastida
AT3G01580 No alias Tetratricopeptide repeat (TPR)-like superfamily protein 0.07 Archaeplastida
AT3G09040 No alias Pentatricopeptide repeat (PPR) superfamily protein 0.06 Archaeplastida
AT3G12770 MEF22 mitochondrial editing factor 22 0.07 Archaeplastida
AT3G13770 No alias Pentatricopeptide repeat (PPR) superfamily protein 0.02 Archaeplastida
AT3G15930 No alias Pentatricopeptide repeat (PPR) superfamily protein 0.03 Archaeplastida
AT3G16610 No alias pentatricopeptide (PPR) repeat-containing protein 0.03 Archaeplastida
AT3G18970 MEF20 mitochondrial editing factor 20 0.03 Archaeplastida
AT3G21470 No alias Pentatricopeptide repeat (PPR-like) superfamily protein 0.03 Archaeplastida
AT3G22690 No alias CONTAINS InterPro DOMAIN/s: Protein of unknown function... 0.03 Archaeplastida
AT3G49142 No alias Tetratricopeptide repeat (TPR)-like superfamily protein 0.08 Archaeplastida
AT3G53360 No alias Tetratricopeptide repeat (TPR)-like superfamily protein 0.03 Archaeplastida
AT3G63370 OTP86 Tetratricopeptide repeat (TPR)-like superfamily protein 0.02 Archaeplastida
AT4G13650 No alias Pentatricopeptide repeat (PPR) superfamily protein 0.03 Archaeplastida
AT4G14850 LOI1, MEF11 Pentatricopeptide repeat (PPR) superfamily protein 0.04 Archaeplastida
AT4G18840 No alias Pentatricopeptide repeat (PPR-like) superfamily protein 0.04 Archaeplastida
AT4G21300 No alias Tetratricopeptide repeat (TPR)-like superfamily protein 0.07 Archaeplastida
AT4G32430 No alias Pentatricopeptide repeat (PPR) superfamily protein 0.05 Archaeplastida
AT4G33170 No alias Tetratricopeptide repeat (TPR)-like superfamily protein 0.02 Archaeplastida
AT4G33990 EMB2758 Tetratricopeptide repeat (TPR)-like superfamily protein 0.04 Archaeplastida
AT4G35130 No alias Tetratricopeptide repeat (TPR)-like superfamily protein 0.03 Archaeplastida
AT4G39952 No alias Pentatricopeptide repeat (PPR) superfamily protein 0.02 Archaeplastida
AT5G06540 No alias Pentatricopeptide repeat (PPR) superfamily protein 0.05 Archaeplastida
AT5G27110 No alias Tetratricopeptide repeat (TPR)-like superfamily protein 0.05 Archaeplastida
AT5G39680 EMB2744 Pentatricopeptide repeat (PPR) superfamily protein 0.05 Archaeplastida
AT5G40410 No alias Tetratricopeptide repeat (TPR)-like superfamily protein 0.02 Archaeplastida
AT5G65570 No alias Tetratricopeptide repeat (TPR)-like superfamily protein 0.04 Archaeplastida
Cre08.g358250 No alias Pentatricopeptide repeat-containing protein At5g02860... 0.02 Archaeplastida
GSVIVT01000968001 No alias Putative pentatricopeptide repeat-containing protein... 0.09 Archaeplastida
GSVIVT01003804001 No alias Pentatricopeptide repeat-containing protein At5g16860... 0.04 Archaeplastida
GSVIVT01003957001 No alias Pentatricopeptide repeat-containing protein At5g65570... 0.03 Archaeplastida
GSVIVT01008015001 No alias Pentatricopeptide repeat-containing protein At1g74600,... 0.04 Archaeplastida
GSVIVT01008173001 No alias Pentatricopeptide repeat-containing protein At1g18485... 0.03 Archaeplastida
GSVIVT01008965001 No alias Pentatricopeptide repeat-containing protein At4g18520,... 0.02 Archaeplastida
GSVIVT01009227001 No alias Pentatricopeptide repeat-containing protein At2g22070... 0.04 Archaeplastida
GSVIVT01009407001 No alias Pentatricopeptide repeat-containing protein At2g27610... 0.03 Archaeplastida
GSVIVT01010031001 No alias RNA processing.organelle machineries.RNA... 0.03 Archaeplastida
GSVIVT01010125001 No alias Putative pentatricopeptide repeat-containing protein... 0.04 Archaeplastida
GSVIVT01011479001 No alias Pentatricopeptide repeat-containing protein At3g29230... 0.03 Archaeplastida
GSVIVT01015233001 No alias Pentatricopeptide repeat-containing protein DOT4,... 0.06 Archaeplastida
GSVIVT01017209001 No alias RNA processing.organelle machineries.RNA... 0.03 Archaeplastida
GSVIVT01019231001 No alias Pentatricopeptide repeat-containing protein At3g03580... 0.05 Archaeplastida
GSVIVT01020091001 No alias RNA processing.organelle machineries.RNA... 0.03 Archaeplastida
GSVIVT01021023001 No alias RNA processing.organelle machineries.RNA... 0.03 Archaeplastida
GSVIVT01021774001 No alias Pentatricopeptide repeat-containing protein At4g20770... 0.06 Archaeplastida
GSVIVT01023644001 No alias Pentatricopeptide repeat-containing protein At4g30700... 0.03 Archaeplastida
GSVIVT01024233001 No alias Pentatricopeptide repeat-containing protein DOT4,... 0.04 Archaeplastida
GSVIVT01024493001 No alias Pentatricopeptide repeat-containing protein At4g39952,... 0.04 Archaeplastida
GSVIVT01026141001 No alias Pentatricopeptide repeat-containing protein At3g09040,... 0.05 Archaeplastida
GSVIVT01027077001 No alias RNA processing.organelle machineries.RNA... 0.02 Archaeplastida
GSVIVT01027196001 No alias Pentatricopeptide repeat-containing protein At5g08510... 0.03 Archaeplastida
GSVIVT01027504001 No alias Pentatricopeptide repeat-containing protein At2g22070... 0.02 Archaeplastida
GSVIVT01029382001 No alias Putative pentatricopeptide repeat-containing protein... 0.03 Archaeplastida
GSVIVT01029885001 No alias Putative pentatricopeptide repeat-containing protein... 0.04 Archaeplastida
GSVIVT01030054001 No alias Pentatricopeptide repeat-containing protein At5g48910... 0.04 Archaeplastida
GSVIVT01031733001 No alias Pentatricopeptide repeat-containing protein At4g33990... 0.03 Archaeplastida
GSVIVT01032394001 No alias Pentatricopeptide repeat-containing protein At4g33990... 0.04 Archaeplastida
GSVIVT01036393001 No alias Pentatricopeptide repeat-containing protein At1g71490... 0.03 Archaeplastida
GSVIVT01036511001 No alias RNA processing.organelle machineries.RNA... 0.03 Archaeplastida
GSVIVT01036788001 No alias Pentatricopeptide repeat-containing protein At4g13650... 0.06 Archaeplastida
GSVIVT01037258001 No alias Pentatricopeptide repeat-containing protein At5g27110... 0.09 Archaeplastida
Gb_00199 No alias Pentatricopeptide repeat-containing protein At3g03580... 0.02 Archaeplastida
Gb_00776 No alias Pentatricopeptide repeat-containing protein At5g50390,... 0.03 Archaeplastida
Gb_01226 No alias RNA editing factor (OTP82) 0.04 Archaeplastida
Gb_02911 No alias Pentatricopeptide repeat-containing protein At2g22070... 0.04 Archaeplastida
Gb_03354 No alias RNA editing factor (OTP82) 0.03 Archaeplastida
Gb_03691 No alias Pentatricopeptide repeat-containing protein At3g24000,... 0.02 Archaeplastida
Gb_04079 No alias RNA editing factor (MEF19) 0.04 Archaeplastida
Gb_04417 No alias Pentatricopeptide repeat-containing protein At4g21300... 0.03 Archaeplastida
Gb_05259 No alias Pentatricopeptide repeat-containing protein At2g03880,... 0.03 Archaeplastida
Gb_05649 No alias Pentatricopeptide repeat-containing protein At4g02750... 0.03 Archaeplastida
Gb_05883 No alias Pentatricopeptide repeat-containing protein At2g13600... 0.03 Archaeplastida
Gb_06272 No alias Pentatricopeptide repeat-containing protein DOT4,... 0.04 Archaeplastida
Gb_06568 No alias Pentatricopeptide repeat-containing protein At2g03880,... 0.03 Archaeplastida
Gb_07442 No alias Pentatricopeptide repeat-containing protein At2g27610... 0.05 Archaeplastida
Gb_07570 No alias Pentatricopeptide repeat-containing protein At4g02750... 0.03 Archaeplastida
Gb_07727 No alias Pentatricopeptide repeat-containing protein At2g27610... 0.03 Archaeplastida
Gb_08118 No alias Pentatricopeptide repeat-containing protein At5g16860... 0.03 Archaeplastida
Gb_08862 No alias Pentatricopeptide repeat-containing protein At3g03580... 0.02 Archaeplastida
Gb_09361 No alias Pentatricopeptide repeat-containing protein At2g22070... 0.03 Archaeplastida
Gb_09382 No alias Putative pentatricopeptide repeat-containing protein... 0.02 Archaeplastida
Gb_09407 No alias Pentatricopeptide repeat-containing protein At4g33990... 0.03 Archaeplastida
Gb_09654 No alias RNA editing factor (MEF13) 0.03 Archaeplastida
Gb_11581 No alias Pentatricopeptide repeat-containing protein At2g27610... 0.02 Archaeplastida
Gb_11981 No alias Pentatricopeptide repeat-containing protein At3g24000,... 0.02 Archaeplastida
Gb_12240 No alias Pentatricopeptide repeat-containing protein At4g33170... 0.02 Archaeplastida
Gb_12555 No alias Pentatricopeptide repeat-containing protein At2g22070... 0.03 Archaeplastida
Gb_13227 No alias Pentatricopeptide repeat-containing protein At2g27610... 0.03 Archaeplastida
Gb_14445 No alias Pentatricopeptide repeat-containing protein At4g13650... 0.03 Archaeplastida
Gb_14617 No alias Pentatricopeptide repeat-containing protein At2g22070... 0.05 Archaeplastida
Gb_15129 No alias Pentatricopeptide repeat-containing protein At3g63370,... 0.02 Archaeplastida
Gb_15507 No alias Pentatricopeptide repeat-containing protein At2g13600... 0.03 Archaeplastida
Gb_15639 No alias Pentatricopeptide repeat-containing protein At4g02750... 0.02 Archaeplastida
Gb_17294 No alias RNA editing factor (MEF3) 0.02 Archaeplastida
Gb_17295 No alias Pentatricopeptide repeat-containing protein At3g57430,... 0.02 Archaeplastida
Gb_19828 No alias RNA editing factor (OTP82) 0.02 Archaeplastida
Gb_21237 No alias Putative pentatricopeptide repeat-containing protein... 0.02 Archaeplastida
Gb_21442 No alias Pentatricopeptide repeat-containing protein At3g12770... 0.02 Archaeplastida
Gb_23018 No alias RNA editing factor (OTP82) 0.05 Archaeplastida
Gb_23084 No alias Pentatricopeptide repeat-containing protein At3g12770... 0.03 Archaeplastida
Gb_23924 No alias Pentatricopeptide repeat-containing protein At4g13650... 0.03 Archaeplastida
Gb_24674 No alias Pentatricopeptide repeat-containing protein At1g11290,... 0.04 Archaeplastida
Gb_25029 No alias Pentatricopeptide repeat-containing protein At2g13600... 0.04 Archaeplastida
Gb_25046 No alias Putative pentatricopeptide repeat-containing protein... 0.03 Archaeplastida
Gb_25359 No alias Pentatricopeptide repeat-containing protein At2g22070... 0.03 Archaeplastida
Gb_25737 No alias RNA editing factor (MEF1) 0.05 Archaeplastida
Gb_25869 No alias Pentatricopeptide repeat-containing protein At4g39530... 0.03 Archaeplastida
Gb_26501 No alias Pentatricopeptide repeat-containing protein At4g02750... 0.03 Archaeplastida
Gb_26816 No alias Pentatricopeptide repeat-containing protein At1g11290,... 0.03 Archaeplastida
Gb_27176 No alias Pentatricopeptide repeat-containing protein At4g13650... 0.04 Archaeplastida
Gb_27468 No alias Pentatricopeptide repeat-containing protein At4g02750... 0.05 Archaeplastida
Gb_27797 No alias Pentatricopeptide repeat-containing protein At4g13650... 0.04 Archaeplastida
Gb_28030 No alias Pentatricopeptide repeat-containing protein At1g08070,... 0.04 Archaeplastida
Gb_28343 No alias Pentatricopeptide repeat-containing protein At3g12770... 0.04 Archaeplastida
Gb_28762 No alias Pentatricopeptide repeat-containing protein At4g13650... 0.03 Archaeplastida
Gb_30146 No alias Pentatricopeptide repeat-containing protein At2g27610... 0.02 Archaeplastida
Gb_30991 No alias Putative pentatricopeptide repeat-containing protein... 0.03 Archaeplastida
Gb_30993 No alias Pentatricopeptide repeat-containing protein At4g02750... 0.04 Archaeplastida
Gb_31546 No alias RNA editing factor (MEF3) 0.02 Archaeplastida
Gb_31699 No alias Pentatricopeptide repeat-containing protein At1g19720... 0.03 Archaeplastida
Gb_32256 No alias Pentatricopeptide repeat-containing protein At2g03880,... 0.03 Archaeplastida
Gb_32447 No alias Pentatricopeptide repeat-containing protein At2g03880,... 0.04 Archaeplastida
Gb_32452 No alias Pentatricopeptide repeat-containing protein At3g03580... 0.04 Archaeplastida
Gb_33070 No alias Pentatricopeptide repeat-containing protein At3g12770... 0.04 Archaeplastida
Gb_33328 No alias Pentatricopeptide repeat-containing protein At4g13650... 0.04 Archaeplastida
Gb_33537 No alias Pentatricopeptide repeat-containing protein At2g22070... 0.02 Archaeplastida
Gb_34963 No alias Pentatricopeptide repeat-containing protein At4g02750... 0.03 Archaeplastida
Gb_35407 No alias Pentatricopeptide repeat-containing protein At4g13650... 0.04 Archaeplastida
Gb_35886 No alias Pentatricopeptide repeat-containing protein DOT4,... 0.03 Archaeplastida
Gb_36177 No alias Pentatricopeptide repeat-containing protein At2g03880,... 0.03 Archaeplastida
Gb_36260 No alias Pentatricopeptide repeat-containing protein At1g09410,... 0.03 Archaeplastida
Gb_36365 No alias Putative pentatricopeptide repeat-containing protein... 0.03 Archaeplastida
Gb_36636 No alias Pentatricopeptide repeat-containing protein At2g22070... 0.02 Archaeplastida
Gb_38068 No alias RNA editing factor (OTP82) 0.05 Archaeplastida
Gb_38441 No alias Pentatricopeptide repeat-containing protein At3g57430,... 0.02 Archaeplastida
Gb_38751 No alias Putative pentatricopeptide repeat-containing protein... 0.03 Archaeplastida
Gb_38938 No alias Pentatricopeptide repeat-containing protein At2g27610... 0.04 Archaeplastida
Gb_40047 No alias Pentatricopeptide repeat-containing protein At1g11290,... 0.02 Archaeplastida
Gb_41341 No alias Pentatricopeptide repeat-containing protein DOT4,... 0.03 Archaeplastida
LOC_Os01g19380.1 No alias Putative pentatricopeptide repeat-containing protein... 0.02 Archaeplastida
LOC_Os01g27650.1 No alias Pentatricopeptide repeat-containing protein At2g33680... 0.02 Archaeplastida
LOC_Os01g40720.1 No alias RNA editing factor (MEF7) 0.05 Archaeplastida
LOC_Os01g55960.1 No alias Pentatricopeptide repeat-containing protein At5g56310... 0.04 Archaeplastida
LOC_Os02g06880.1 No alias Pentatricopeptide repeat-containing protein At4g21065... 0.02 Archaeplastida
LOC_Os03g32620.1 No alias Putative pentatricopeptide repeat-containing protein... 0.06 Archaeplastida
LOC_Os03g63260.3 No alias Putative pentatricopeptide repeat-containing protein... 0.04 Archaeplastida
LOC_Os04g41120.1 No alias Pentatricopeptide repeat-containing protein At4g38010... 0.04 Archaeplastida
LOC_Os04g53630.1 No alias Pentatricopeptide repeat-containing protein At3g20730... 0.03 Archaeplastida
LOC_Os05g24150.1 No alias Pentatricopeptide repeat-containing protein At2g34400... 0.08 Archaeplastida
LOC_Os05g38190.2 No alias Pentatricopeptide repeat-containing protein At2g27610... 0.05 Archaeplastida
LOC_Os05g49740.1 No alias Pentatricopeptide repeat-containing protein At5g39680... 0.04 Archaeplastida
LOC_Os05g50460.1 No alias Putative pentatricopeptide repeat-containing protein... 0.02 Archaeplastida
LOC_Os06g08660.1 No alias Pentatricopeptide repeat-containing protein At4g30700... 0.02 Archaeplastida
LOC_Os06g12510.1 No alias Pentatricopeptide repeat-containing protein At5g15300... 0.02 Archaeplastida
LOC_Os06g40860.1 No alias Pentatricopeptide repeat-containing protein At1g03540... 0.05 Archaeplastida
LOC_Os06g49185.1 No alias Pentatricopeptide repeat-containing protein At3g03580... 0.05 Archaeplastida
LOC_Os07g09370.1 No alias RNA editing factor (CRR28) 0.02 Archaeplastida
LOC_Os07g19400.1 No alias Pentatricopeptide repeat-containing protein At1g71490... 0.05 Archaeplastida
LOC_Os07g20420.1 No alias Pentatricopeptide repeat-containing protein At3g26782,... 0.05 Archaeplastida
LOC_Os07g25500.1 No alias Pentatricopeptide repeat-containing protein At3g46790,... 0.05 Archaeplastida
LOC_Os07g39090.1 No alias Putative pentatricopeptide repeat-containing protein... 0.05 Archaeplastida
LOC_Os08g04400.1 No alias Pentatricopeptide repeat-containing protein At5g50390,... 0.03 Archaeplastida
LOC_Os08g25280.1 No alias Pentatricopeptide repeat-containing protein At4g39530... 0.12 Archaeplastida
LOC_Os08g28830.1 No alias Putative pentatricopeptide repeat-containing protein... 0.04 Archaeplastida
LOC_Os08g33700.1 No alias Pentatricopeptide repeat-containing protein At3g47530... 0.03 Archaeplastida
LOC_Os10g34720.1 No alias Putative pentatricopeptide repeat-containing protein... 0.02 Archaeplastida
LOC_Os11g01860.1 No alias Pentatricopeptide repeat-containing protein At3g09040,... 0.03 Archaeplastida
LOC_Os11g10740.1 No alias Pentatricopeptide repeat-containing protein At1g20230... 0.02 Archaeplastida
LOC_Os12g01850.1 No alias Putative pentatricopeptide repeat-containing protein... 0.03 Archaeplastida
LOC_Os12g06070.1 No alias Pentatricopeptide repeat-containing protein At5g04780,... 0.04 Archaeplastida
LOC_Os12g15460.1 No alias Pentatricopeptide repeat-containing protein At1g18485... 0.02 Archaeplastida
MA_10214098g0010 No alias Pentatricopeptide repeat-containing protein At4g33170... 0.04 Archaeplastida
MA_10257685g0010 No alias Pentatricopeptide repeat-containing protein DOT4,... 0.02 Archaeplastida
MA_10427342g0010 No alias Pentatricopeptide repeat-containing protein At3g09040,... 0.03 Archaeplastida
MA_10429837g0010 No alias Pentatricopeptide repeat-containing protein At1g11290,... 0.02 Archaeplastida
MA_10432670g0020 No alias Putative pentatricopeptide repeat-containing protein... 0.02 Archaeplastida
MA_104937g0010 No alias Pentatricopeptide repeat-containing protein At2g03880,... 0.04 Archaeplastida
MA_106123g0010 No alias Pentatricopeptide repeat-containing protein At1g11290,... 0.03 Archaeplastida
MA_107356g0010 No alias Putative pentatricopeptide repeat-containing protein... 0.02 Archaeplastida
MA_1109g0010 No alias Pentatricopeptide repeat-containing protein At4g33170... 0.02 Archaeplastida
MA_112594g0010 No alias Pentatricopeptide repeat-containing protein At2g22070... 0.05 Archaeplastida
MA_114722g0010 No alias Pentatricopeptide repeat-containing protein At1g11290,... 0.02 Archaeplastida
MA_115669g0020 No alias Pentatricopeptide repeat-containing protein DOT4,... 0.02 Archaeplastida
MA_116442g0010 No alias Pentatricopeptide repeat-containing protein At2g27610... 0.03 Archaeplastida
MA_11765g0010 No alias Pentatricopeptide repeat-containing protein At1g11290,... 0.03 Archaeplastida
MA_119635g0010 No alias Putative pentatricopeptide repeat-containing protein... 0.02 Archaeplastida
MA_121267g0010 No alias Pentatricopeptide repeat-containing protein At4g02750... 0.04 Archaeplastida
MA_130735g0010 No alias Pentatricopeptide repeat-containing protein At4g13650... 0.02 Archaeplastida
MA_131437g0010 No alias RNA editing factor (MEF3) 0.03 Archaeplastida
MA_131g0010 No alias Pentatricopeptide repeat-containing protein At4g02750... 0.06 Archaeplastida
MA_136326g0010 No alias Pentatricopeptide repeat-containing protein At3g57430,... 0.05 Archaeplastida
MA_138190g0010 No alias Pentatricopeptide repeat-containing protein At1g11290,... 0.06 Archaeplastida
MA_139163g0010 No alias Pentatricopeptide repeat-containing protein At4g13650... 0.04 Archaeplastida
MA_14381g0010 No alias Pentatricopeptide repeat-containing protein At3g12770... 0.04 Archaeplastida
MA_14938g0010 No alias Pentatricopeptide repeat-containing protein At1g11290,... 0.06 Archaeplastida
MA_16226g0010 No alias Pentatricopeptide repeat-containing protein At3g63370,... 0.02 Archaeplastida
MA_16339g0010 No alias Pentatricopeptide repeat-containing protein At3g57430,... 0.02 Archaeplastida
MA_1673g0010 No alias Pentatricopeptide repeat-containing protein At1g19720... 0.06 Archaeplastida
MA_16917g0010 No alias Pentatricopeptide repeat-containing protein At4g13650... 0.03 Archaeplastida
MA_174226g0010 No alias Pentatricopeptide repeat-containing protein At4g13650... 0.02 Archaeplastida
MA_175688g0010 No alias Putative pentatricopeptide repeat-containing protein... 0.03 Archaeplastida
MA_183278g0010 No alias Pentatricopeptide repeat-containing protein At3g12770... 0.04 Archaeplastida
MA_18383g0010 No alias Pentatricopeptide repeat-containing protein At1g11290,... 0.03 Archaeplastida
MA_187514g0010 No alias Pentatricopeptide repeat-containing protein At1g11290,... 0.02 Archaeplastida
MA_19715g0020 No alias Pentatricopeptide repeat-containing protein At2g13600... 0.02 Archaeplastida
MA_19816g0010 No alias Pentatricopeptide repeat-containing protein At2g13600... 0.06 Archaeplastida
MA_215359g0010 No alias Pentatricopeptide repeat-containing protein At4g02750... 0.02 Archaeplastida
MA_22485g0010 No alias Pentatricopeptide repeat-containing protein At3g46790,... 0.04 Archaeplastida
MA_2473g0010 No alias Pentatricopeptide repeat-containing protein At3g12770... 0.05 Archaeplastida
MA_25584g0010 No alias Pentatricopeptide repeat-containing protein DOT4,... 0.04 Archaeplastida
MA_27147g0010 No alias Pentatricopeptide repeat-containing protein At3g49170,... 0.02 Archaeplastida
MA_27726g0010 No alias RNA editing factor (ECB2/VAC1) 0.03 Archaeplastida
MA_286190g0010 No alias Pentatricopeptide repeat-containing protein At3g63370,... 0.04 Archaeplastida
MA_291996g0010 No alias Pentatricopeptide repeat-containing protein At1g11290,... 0.04 Archaeplastida
MA_30632g0020 No alias Pentatricopeptide repeat-containing protein At4g02750... 0.02 Archaeplastida
MA_3449g0010 No alias Pentatricopeptide repeat-containing protein At2g22070... 0.02 Archaeplastida
MA_3471g0010 No alias RNA editing factor (MEF19) 0.04 Archaeplastida
MA_356g0010 No alias Putative pentatricopeptide repeat-containing protein... 0.02 Archaeplastida
MA_39801g0010 No alias Putative pentatricopeptide repeat-containing protein... 0.02 Archaeplastida
MA_412g0010 No alias Pentatricopeptide repeat-containing protein At2g13600... 0.06 Archaeplastida
MA_445076g0010 No alias Pentatricopeptide repeat-containing protein At2g13600... 0.05 Archaeplastida
MA_472579g0010 No alias Pentatricopeptide repeat-containing protein At4g33170... 0.04 Archaeplastida
MA_483636g0010 No alias Pentatricopeptide repeat-containing protein At4g13650... 0.02 Archaeplastida
MA_502206g0010 No alias Pentatricopeptide repeat-containing protein At1g20230... 0.02 Archaeplastida
MA_52613g0020 No alias Pentatricopeptide repeat-containing protein At4g33170... 0.02 Archaeplastida
MA_5481g0010 No alias Pentatricopeptide repeat-containing protein DOT4,... 0.02 Archaeplastida
MA_57048g0010 No alias Pentatricopeptide repeat-containing protein At3g09040,... 0.05 Archaeplastida
MA_59148g0010 No alias RNA editing factor (MEF11) 0.02 Archaeplastida
MA_60579g0010 No alias Pentatricopeptide repeat-containing protein At2g22070... 0.05 Archaeplastida
MA_615077g0010 No alias Pentatricopeptide repeat-containing protein At3g12770... 0.02 Archaeplastida
MA_63139g0020 No alias Pentatricopeptide repeat-containing protein At4g13650... 0.02 Archaeplastida
MA_656915g0010 No alias Pentatricopeptide repeat-containing protein DOT4,... 0.02 Archaeplastida
MA_66417g0010 No alias Pentatricopeptide repeat-containing protein At2g22070... 0.02 Archaeplastida
MA_683665g0010 No alias Pentatricopeptide repeat-containing protein At4g13650... 0.05 Archaeplastida
MA_70677g0010 No alias no hits & (original description: none) 0.03 Archaeplastida
MA_73895g0010 No alias Pentatricopeptide repeat-containing protein At2g27610... 0.02 Archaeplastida
MA_742g0010 No alias Putative pentatricopeptide repeat-containing protein... 0.05 Archaeplastida
MA_75255g0010 No alias Pentatricopeptide repeat-containing protein At4g33170... 0.03 Archaeplastida
MA_7691g0010 No alias Pentatricopeptide repeat-containing protein At2g22070... 0.03 Archaeplastida
MA_77675g0010 No alias Pentatricopeptide repeat-containing protein At4g13650... 0.02 Archaeplastida
MA_778985g0010 No alias Pentatricopeptide repeat-containing protein At2g27610... 0.04 Archaeplastida
MA_79624g0010 No alias Putative pentatricopeptide repeat-containing protein... 0.04 Archaeplastida
MA_805687g0010 No alias Pentatricopeptide repeat-containing protein At4g33170... 0.06 Archaeplastida
MA_81105g0010 No alias RNA editing factor (OTP82) 0.02 Archaeplastida
MA_81436g0010 No alias Pentatricopeptide repeat-containing protein At4g21300... 0.04 Archaeplastida
MA_81514g0010 No alias Pentatricopeptide repeat-containing protein At1g11290,... 0.03 Archaeplastida
MA_8210920g0010 No alias Pentatricopeptide repeat-containing protein At2g13600... 0.02 Archaeplastida
MA_8319g0010 No alias Pentatricopeptide repeat-containing protein At3g24000,... 0.02 Archaeplastida
MA_84538g0010 No alias Pentatricopeptide repeat-containing protein At4g13650... 0.02 Archaeplastida
MA_8491g0010 No alias Pentatricopeptide repeat-containing protein At4g02750... 0.02 Archaeplastida
MA_8607116g0010 No alias Pentatricopeptide repeat-containing protein At3g24000,... 0.02 Archaeplastida
MA_86739g0010 No alias Pentatricopeptide repeat-containing protein At4g13650... 0.04 Archaeplastida
MA_87646g0010 No alias RNA editing factor (MEF13) 0.04 Archaeplastida
MA_8893194g0010 No alias RNA editing factor (MEF1) 0.02 Archaeplastida
MA_9258g0010 No alias Pentatricopeptide repeat-containing protein At4g13650... 0.04 Archaeplastida
MA_9354530g0010 No alias Pentatricopeptide repeat-containing protein At1g11290,... 0.02 Archaeplastida
MA_9384g0020 No alias Pentatricopeptide repeat-containing protein At3g49170,... 0.02 Archaeplastida
MA_944980g0010 No alias Pentatricopeptide repeat-containing protein At3g57430,... 0.03 Archaeplastida
MA_958908g0010 No alias Pentatricopeptide repeat-containing protein At2g22070... 0.02 Archaeplastida
MA_961981g0010 No alias Pentatricopeptide repeat-containing protein At2g27610... 0.03 Archaeplastida
MA_96662g0010 No alias Pentatricopeptide repeat-containing protein At3g57430,... 0.03 Archaeplastida
Pp3c5_15090V3.1 No alias Pentatricopeptide repeat (PPR) superfamily protein 0.02 Archaeplastida
Smo100621 No alias Pentatricopeptide repeat-containing protein At2g13600... 0.03 Archaeplastida
Smo101 No alias Pentatricopeptide repeat-containing protein At4g13650... 0.03 Archaeplastida
Smo113974 No alias Pentatricopeptide repeat-containing protein At4g13650... 0.02 Archaeplastida
Smo21427 No alias Pentatricopeptide repeat-containing protein At2g13600... 0.02 Archaeplastida
Smo34426 No alias Pentatricopeptide repeat-containing protein At4g14820... 0.04 Archaeplastida
Smo61782 No alias Pentatricopeptide repeat-containing protein At4g13650... 0.02 Archaeplastida
Smo96927 No alias Pentatricopeptide repeat-containing protein At3g24000,... 0.02 Archaeplastida
Solyc01g006920.4.1 No alias Pentatricopeptide repeat-containing protein At4g39530... 0.05 Archaeplastida
Solyc01g007850.2.1 No alias Pentatricopeptide repeat-containing protein At4g13650... 0.02 Archaeplastida
Solyc01g081020.1.1 No alias RNA editing factor (OTP80) 0.02 Archaeplastida
Solyc01g091610.1.1 No alias Pentatricopeptide repeat-containing protein At2g27610... 0.02 Archaeplastida
Solyc01g110010.3.1 No alias Pentatricopeptide repeat-containing protein At1g74600,... 0.06 Archaeplastida
Solyc02g011680.4.1 No alias Pentatricopeptide repeat-containing protein At5g27110... 0.02 Archaeplastida
Solyc02g080350.1.1 No alias Pentatricopeptide repeat-containing protein At1g77170,... 0.02 Archaeplastida
Solyc02g082160.2.1 No alias Pentatricopeptide repeat-containing protein At1g11290,... 0.05 Archaeplastida
Solyc02g088470.1.1 No alias Pentatricopeptide repeat-containing protein At3g29230... 0.03 Archaeplastida
Solyc03g063160.1.1 No alias Pentatricopeptide repeat-containing protein At2g22070... 0.05 Archaeplastida
Solyc03g097850.1.1 No alias Pentatricopeptide repeat-containing protein At5g16860... 0.03 Archaeplastida
Solyc03g098420.3.1 No alias Putative pentatricopeptide repeat-containing protein... 0.04 Archaeplastida
Solyc03g120460.4.1 No alias No annotation 0.03 Archaeplastida
Solyc04g005460.1.1 No alias Pentatricopeptide repeat-containing protein At2g20540... 0.02 Archaeplastida
Solyc04g005770.3.1 No alias Pentatricopeptide repeat-containing protein At2g02750... 0.02 Archaeplastida
Solyc04g009210.1.1 No alias Pentatricopeptide repeat-containing protein At5g08305... 0.02 Archaeplastida
Solyc05g012630.2.1 No alias Putative pentatricopeptide repeat-containing protein... 0.07 Archaeplastida
Solyc06g053850.4.1 No alias Pentatricopeptide repeat-containing protein At4g02750... 0.03 Archaeplastida
Solyc06g062610.2.1 No alias Putative pentatricopeptide repeat-containing protein... 0.04 Archaeplastida
Solyc07g006990.3.1 No alias Putative pentatricopeptide repeat-containing protein... 0.02 Archaeplastida
Solyc07g008480.3.1 No alias Pentatricopeptide repeat-containing protein At3g14730... 0.03 Archaeplastida
Solyc07g053520.2.1 No alias Putative pentatricopeptide repeat-containing protein... 0.02 Archaeplastida
Solyc07g055310.1.1 No alias Pentatricopeptide repeat-containing protein At2g41080... 0.02 Archaeplastida
Solyc08g023640.1.1 No alias Pentatricopeptide repeat-containing protein At4g21065... 0.03 Archaeplastida
Solyc09g008300.2.1 No alias Pentatricopeptide repeat-containing protein At2g29760,... 0.02 Archaeplastida
Solyc09g009950.4.1 No alias RNA editing factor (MEF10) 0.03 Archaeplastida
Solyc09g010070.1.1 No alias Pentatricopeptide repeat-containing protein At4g33990... 0.02 Archaeplastida
Solyc09g065710.1.1 No alias RNA editing factor (OTP86) 0.08 Archaeplastida
Solyc09g082400.2.1 No alias Pentatricopeptide repeat-containing protein At1g71490... 0.05 Archaeplastida
Solyc09g090220.3.1 No alias Putative pentatricopeptide repeat-containing protein... 0.07 Archaeplastida
Solyc09g092050.4.1 No alias Pentatricopeptide repeat-containing protein At1g04840... 0.03 Archaeplastida
Solyc10g054730.1.1 No alias Putative pentatricopeptide repeat-containing protein... 0.03 Archaeplastida
Solyc11g017290.1.1 No alias Pentatricopeptide repeat-containing protein At1g31430... 0.03 Archaeplastida
Solyc11g062250.2.1 No alias Pentatricopeptide repeat-containing protein At2g22410,... 0.03 Archaeplastida
Solyc11g067210.1.1 No alias Pentatricopeptide repeat-containing protein At2g27610... 0.05 Archaeplastida
Solyc12g042400.1.1 No alias Pentatricopeptide repeat-containing protein At2g29760,... 0.02 Archaeplastida
Solyc12g099850.1.1 No alias Pentatricopeptide repeat-containing protein At1g18485... 0.03 Archaeplastida
Zm00001e004121_P001 No alias no hits & (original description: none) 0.03 Archaeplastida
Zm00001e007042_P001 No alias RNA editing factor (AEF1) 0.04 Archaeplastida
Zm00001e008203_P002 No alias Pentatricopeptide repeat-containing protein At4g13650... 0.04 Archaeplastida
Zm00001e011467_P004 No alias Pentatricopeptide repeat-containing protein At5g03800... 0.05 Archaeplastida
Zm00001e015727_P001 No alias Pentatricopeptide repeat-containing protein At5g66520... 0.03 Archaeplastida
Zm00001e029186_P001 No alias Pentatricopeptide repeat-containing protein At1g19720... 0.03 Archaeplastida
Zm00001e031351_P001 No alias RNA editing factor (ECD1) 0.03 Archaeplastida
Zm00001e034445_P001 No alias Pentatricopeptide repeat-containing protein At5g48910... 0.03 Archaeplastida

Type GO Term Name Evidence Source
MF GO:0008270 zinc ion binding IEA Interproscan
Toggle parental
Type GO Term Name Evidence Source
MF GO:0000166 nucleotide binding IEP Neighborhood
BP GO:0000375 RNA splicing, via transesterification reactions IEP Neighborhood
BP GO:0000377 RNA splicing, via transesterification reactions with bulged adenosine as nucleophile IEP Neighborhood
BP GO:0000398 mRNA splicing, via spliceosome IEP Neighborhood
MF GO:0001882 nucleoside binding IEP Neighborhood
MF GO:0001883 purine nucleoside binding IEP Neighborhood
BP GO:0002097 tRNA wobble base modification IEP Neighborhood
BP GO:0002098 tRNA wobble uridine modification IEP Neighborhood
MF GO:0003676 nucleic acid binding IEP Neighborhood
MF GO:0003690 double-stranded DNA binding IEP Neighborhood
MF GO:0003723 RNA binding IEP Neighborhood
MF GO:0004519 endonuclease activity IEP Neighborhood
MF GO:0004521 endoribonuclease activity IEP Neighborhood
MF GO:0004526 ribonuclease P activity IEP Neighborhood
MF GO:0004540 ribonuclease activity IEP Neighborhood
MF GO:0004549 tRNA-specific ribonuclease activity IEP Neighborhood
MF GO:0005525 GTP binding IEP Neighborhood
BP GO:0005984 disaccharide metabolic process IEP Neighborhood
BP GO:0005991 trehalose metabolic process IEP Neighborhood
BP GO:0005992 trehalose biosynthetic process IEP Neighborhood
BP GO:0006139 nucleobase-containing compound metabolic process IEP Neighborhood
BP GO:0006396 RNA processing IEP Neighborhood
BP GO:0006397 mRNA processing IEP Neighborhood
BP GO:0006399 tRNA metabolic process IEP Neighborhood
BP GO:0006400 tRNA modification IEP Neighborhood
BP GO:0006725 cellular aromatic compound metabolic process IEP Neighborhood
BP GO:0008033 tRNA processing IEP Neighborhood
BP GO:0008380 RNA splicing IEP Neighborhood
BP GO:0009312 oligosaccharide biosynthetic process IEP Neighborhood
BP GO:0009451 RNA modification IEP Neighborhood
BP GO:0016070 RNA metabolic process IEP Neighborhood
BP GO:0016071 mRNA metabolic process IEP Neighborhood
MF GO:0016891 endoribonuclease activity, producing 5'-phosphomonoesters IEP Neighborhood
MF GO:0016893 endonuclease activity, active with either ribo- or deoxyribonucleic acids and producing 5'-phosphomonoesters IEP Neighborhood
MF GO:0017069 snRNA binding IEP Neighborhood
MF GO:0017070 U6 snRNA binding IEP Neighborhood
MF GO:0017076 purine nucleotide binding IEP Neighborhood
MF GO:0019001 guanyl nucleotide binding IEP Neighborhood
MF GO:0030623 U5 snRNA binding IEP Neighborhood
MF GO:0032549 ribonucleoside binding IEP Neighborhood
MF GO:0032550 purine ribonucleoside binding IEP Neighborhood
MF GO:0032553 ribonucleotide binding IEP Neighborhood
MF GO:0032555 purine ribonucleotide binding IEP Neighborhood
MF GO:0032561 guanyl ribonucleotide binding IEP Neighborhood
CC GO:0033588 Elongator holoenzyme complex IEP Neighborhood
BP GO:0034470 ncRNA processing IEP Neighborhood
BP GO:0034641 cellular nitrogen compound metabolic process IEP Neighborhood
BP GO:0034660 ncRNA metabolic process IEP Neighborhood
MF GO:0035639 purine ribonucleoside triphosphate binding IEP Neighborhood
MF GO:0036094 small molecule binding IEP Neighborhood
MF GO:0043168 anion binding IEP Neighborhood
BP GO:0046351 disaccharide biosynthetic process IEP Neighborhood
BP GO:0046483 heterocycle metabolic process IEP Neighborhood
BP GO:0090304 nucleic acid metabolic process IEP Neighborhood
MF GO:0097159 organic cyclic compound binding IEP Neighborhood
MF GO:0097367 carbohydrate derivative binding IEP Neighborhood
MF GO:1901265 nucleoside phosphate binding IEP Neighborhood
BP GO:1901360 organic cyclic compound metabolic process IEP Neighborhood
MF GO:1901363 heterocyclic compound binding IEP Neighborhood
InterPro domains Description Start Stop
IPR002885 Pentatricopeptide_repeat 750 797
IPR002885 Pentatricopeptide_repeat 126 175
IPR002885 Pentatricopeptide_repeat 234 283
IPR002885 Pentatricopeptide_repeat 649 696
IPR002885 Pentatricopeptide_repeat 419 442
IPR002885 Pentatricopeptide_repeat 823 847
IPR002885 Pentatricopeptide_repeat 622 646
IPR002885 Pentatricopeptide_repeat 314 339
IPR002885 Pentatricopeptide_repeat 447 475
IPR032867 DYW_dom 926 1048
No external refs found!