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  5. Zm00001e021135_P002

Zm00001e021135_P002


Description : E3 ubiquitin-protein ligase At3g02290 OS=Arabidopsis thaliana (sp|q8le94|ring3_arath : 139.0)


Gene families : OG0000951 (Archaeplastida) Phylogenetic Tree(s): OG0000951_tree ,
OG_05_0000709 (LandPlants) Phylogenetic Tree(s): OG_05_0000709_tree ,
OG_06_0000552 (SeedPlants) Phylogenetic Tree(s): OG_06_0000552_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Zm00001e021135_P002
Cluster HCCA: Cluster_30

Target Alias Description ECC score Gene Family Method Actions
AMTR_s00009p00207050 evm_27.TU.AmTr_v1... Protein degradation.peptide tagging.Ubiquitin... 0.02 Archaeplastida
AT4G23450 AtAIRP1, AIRP1 RING/U-box superfamily protein 0.03 Archaeplastida
AT5G41350 No alias RING/U-box superfamily protein 0.03 Archaeplastida
GSVIVT01027002001 No alias Protein degradation.peptide tagging.Ubiquitin... 0.04 Archaeplastida
GSVIVT01036545001 No alias Protein degradation.peptide tagging.Ubiquitin... 0.04 Archaeplastida
LOC_Os11g18947.1 No alias Probable E3 ubiquitin-protein ligase RHB1A... 0.05 Archaeplastida
Pp3c23_21240V3.1 No alias RING/U-box superfamily protein 0.04 Archaeplastida
Solyc01g094840.3.1 No alias Probable E3 ubiquitin-protein ligase RHB1A... 0.02 Archaeplastida
Solyc02g089240.3.1 No alias E3 ubiquitin-protein ligase At3g02290 OS=Arabidopsis... 0.04 Archaeplastida

Type GO Term Name Evidence Source

No GO annotation available for this sequence
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Type GO Term Name Evidence Source
MF GO:0003674 molecular_function IEP Neighborhood
MF GO:0005215 transporter activity IEP Neighborhood
BP GO:0006810 transport IEP Neighborhood
BP GO:0008272 sulfate transport IEP Neighborhood
MF GO:0008509 anion transmembrane transporter activity IEP Neighborhood
MF GO:0015075 ion transmembrane transporter activity IEP Neighborhood
MF GO:0015095 magnesium ion transmembrane transporter activity IEP Neighborhood
MF GO:0015103 inorganic anion transmembrane transporter activity IEP Neighborhood
MF GO:0015116 sulfate transmembrane transporter activity IEP Neighborhood
MF GO:0015318 inorganic molecular entity transmembrane transporter activity IEP Neighborhood
BP GO:0015693 magnesium ion transport IEP Neighborhood
BP GO:0015698 inorganic anion transport IEP Neighborhood
CC GO:0016021 integral component of membrane IEP Neighborhood
MF GO:0022857 transmembrane transporter activity IEP Neighborhood
CC GO:0031224 intrinsic component of membrane IEP Neighborhood
BP GO:0051179 localization IEP Neighborhood
BP GO:0051234 establishment of localization IEP Neighborhood
BP GO:0070838 divalent metal ion transport IEP Neighborhood
BP GO:0072348 sulfur compound transport IEP Neighborhood
BP GO:0072511 divalent inorganic cation transport IEP Neighborhood
MF GO:1901682 sulfur compound transmembrane transporter activity IEP Neighborhood
InterPro domains Description Start Stop
IPR001841 Znf_RING 305 346
No external refs found!