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  5. AT3G25890

AT3G25890


Description : Integrase-type DNA-binding superfamily protein


Gene families : OG0000003 (Archaeplastida) Phylogenetic Tree(s): No tree available for this family ,
OG_05_0000001 (LandPlants) Phylogenetic Tree(s): OG_05_0000001_tree ,
OG_06_0000007 (SeedPlants) Phylogenetic Tree(s): OG_06_0000007_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: AT3G25890
Cluster HCCA: Cluster_132

Target Alias Description ECC score Gene Family Method Actions
AMTR_s00003p00133970 evm_27.TU.AmTr_v1... RNA biosynthesis.transcriptional activation.AP2/ERF... 0.03 Archaeplastida
AMTR_s00009p00147970 evm_27.TU.AmTr_v1... RNA biosynthesis.transcriptional activation.AP2/ERF... 0.04 Archaeplastida
AMTR_s00023p00044590 evm_27.TU.AmTr_v1... RNA biosynthesis.transcriptional activation.AP2/ERF... 0.02 Archaeplastida
AMTR_s00040p00196580 evm_27.TU.AmTr_v1... RNA biosynthesis.transcriptional activation.AP2/ERF... 0.02 Archaeplastida
AMTR_s00069p00132820 evm_27.TU.AmTr_v1... External stimuli response.biotic... 0.04 Archaeplastida
AMTR_s00069p00140780 evm_27.TU.AmTr_v1... RNA biosynthesis.transcriptional activation.AP2/ERF... 0.02 Archaeplastida
AMTR_s00099p00122430 evm_27.TU.AmTr_v1... RNA biosynthesis.transcriptional activation.AP2/ERF... 0.02 Archaeplastida
AMTR_s00150p00091360 evm_27.TU.AmTr_v1... RNA biosynthesis.transcriptional activation.AP2/ERF... 0.02 Archaeplastida
AT1G04370 ERF14, ATERF14 Ethylene-responsive element binding factor 14 0.05 Archaeplastida
AT1G21910 DREB26 Integrase-type DNA-binding superfamily protein 0.07 Archaeplastida
AT1G28160 No alias Integrase-type DNA-binding superfamily protein 0.03 Archaeplastida
AT2G36450 HRD Integrase-type DNA-binding superfamily protein 0.02 Archaeplastida
AT2G44940 No alias Integrase-type DNA-binding superfamily protein 0.06 Archaeplastida
AT2G47520 HRE2 Integrase-type DNA-binding superfamily protein 0.05 Archaeplastida
AT3G60490 No alias Integrase-type DNA-binding superfamily protein 0.06 Archaeplastida
AT5G18560 PUCHI Integrase-type DNA-binding superfamily protein 0.04 Archaeplastida
GSVIVT01002195001 No alias RNA biosynthesis.transcriptional activation.AP2/ERF... 0.04 Archaeplastida
GSVIVT01032961001 No alias RNA biosynthesis.transcriptional activation.AP2/ERF... 0.03 Archaeplastida
GSVIVT01035911001 No alias RNA biosynthesis.transcriptional activation.AP2/ERF... 0.03 Archaeplastida
GSVIVT01036389001 No alias RNA biosynthesis.transcriptional activation.AP2/ERF... 0.04 Archaeplastida
Gb_07476 No alias transcription factor (ERF) 0.03 Archaeplastida
LOC_Os02g10760.1 No alias transcription factor (ERF). SHN-type cutin and suberin... 0.03 Archaeplastida
LOC_Os02g13710.1 No alias transcription factor (DREB) 0.02 Archaeplastida
LOC_Os02g32040.1 No alias transcription factor (ERF) 0.02 Archaeplastida
LOC_Os02g43970.1 No alias transcription factor (DREB) 0.03 Archaeplastida
LOC_Os04g55520.1 No alias transcription factor (DREB) 0.03 Archaeplastida
LOC_Os06g09390.1 No alias transcription factor (ERF) 0.04 Archaeplastida
LOC_Os06g40150.1 No alias transcription factor (ERF). SHN-type cutin and suberin... 0.02 Archaeplastida
LOC_Os07g22730.1 No alias no hits & (original description: none) 0.02 Archaeplastida
LOC_Os08g07700.1 No alias Ethylene-responsive transcription factor ERF087... 0.03 Archaeplastida
LOC_Os08g35240.1 No alias Ethylene-responsive transcription factor ERF017... 0.03 Archaeplastida
MA_10031781g0010 No alias transcription factor (ERF) 0.08 Archaeplastida
MA_10266433g0010 No alias transcription factor (ERF) 0.03 Archaeplastida
MA_10434101g0010 No alias transcription factor (DREB) 0.02 Archaeplastida
MA_120531g0010 No alias transcription factor (ERF) 0.03 Archaeplastida
MA_135279g0010 No alias transcription factor (ERF) 0.08 Archaeplastida
MA_17001g0020 No alias transcription factor (DREB) 0.02 Archaeplastida
MA_180106g0010 No alias transcription factor (ERF) 0.03 Archaeplastida
MA_411387g0010 No alias transcription factor (ERF) 0.02 Archaeplastida
MA_4182g0010 No alias no hits & (original description: none) 0.03 Archaeplastida
MA_42369g0010 No alias transcription factor (ERF) 0.02 Archaeplastida
MA_500288g0010 No alias transcription factor (DREB) 0.02 Archaeplastida
MA_54341g0010 No alias transcription factor (ERF). SHN-type cutin and suberin... 0.03 Archaeplastida
MA_5730259g0010 No alias no hits & (original description: none) 0.02 Archaeplastida
MA_891091g0010 No alias Ethylene-responsive transcription factor 1A... 0.02 Archaeplastida
MA_928517g0010 No alias no hits & (original description: none) 0.03 Archaeplastida
MA_94228g0010 No alias transcription factor (ERF). SHN-type cutin and suberin... 0.06 Archaeplastida
MA_9588449g0010 No alias no hits & (original description: none) 0.07 Archaeplastida
Pp3c10_7030V3.1 No alias Integrase-type DNA-binding superfamily protein 0.09 Archaeplastida
Pp3c11_23290V3.1 No alias Integrase-type DNA-binding superfamily protein 0.01 Archaeplastida
Pp3c11_24520V3.1 No alias Integrase-type DNA-binding superfamily protein 0.03 Archaeplastida
Pp3c16_17550V3.1 No alias Integrase-type DNA-binding superfamily protein 0.02 Archaeplastida
Pp3c17_10170V3.1 No alias erf domain protein 9 0.02 Archaeplastida
Pp3c3_33930V3.1 No alias Integrase-type DNA-binding superfamily protein 0.02 Archaeplastida
Pp3c4_23930V3.1 No alias ethylene responsive element binding factor 1 0.02 Archaeplastida
Pp3c4_2530V3.1 No alias Integrase-type DNA-binding superfamily protein 0.01 Archaeplastida
Pp3c8_7340V3.1 No alias Integrase-type DNA-binding superfamily protein 0.01 Archaeplastida
Smo104980 No alias RNA biosynthesis.transcriptional activation.AP2/ERF... 0.04 Archaeplastida
Solyc05g052410.3.1 No alias transcription factor (DREB) 0.06 Archaeplastida
Solyc06g065820.3.1 No alias transcription factor (ERF) 0.05 Archaeplastida
Solyc06g068360.3.1 No alias transcription factor (ERF) 0.05 Archaeplastida
Solyc09g066350.1.1 No alias transcription factor (ERF) 0.05 Archaeplastida
Solyc12g056980.1.1 No alias transcription factor (DREB) 0.05 Archaeplastida
Zm00001e000609_P001 No alias transcription factor (ERF) 0.04 Archaeplastida
Zm00001e001139_P001 No alias Ethylene-responsive transcription factor ERF014... 0.06 Archaeplastida
Zm00001e008306_P001 No alias transcription factor (ERF) 0.04 Archaeplastida
Zm00001e014008_P002 No alias transcription factor (ERF). SHN-type cutin and suberin... 0.02 Archaeplastida

Type GO Term Name Evidence Source
MF GO:0003677 DNA binding ISS Interproscan
MF GO:0003700 DNA-binding transcription factor activity ISS Interproscan
CC GO:0005634 nucleus ISS Interproscan
CC GO:0005634 nucleus ISM Interproscan
BP GO:0006355 regulation of transcription, DNA-templated ISS Interproscan
Toggle parental
Type GO Term Name Evidence Source
BP GO:0002684 positive regulation of immune system process IEP Neighborhood
MF GO:0004601 peroxidase activity IEP Neighborhood
MF GO:0005216 ion channel activity IEP Neighborhood
MF GO:0005217 intracellular ligand-gated ion channel activity IEP Neighborhood
CC GO:0005777 peroxisome IEP Neighborhood
BP GO:0006568 tryptophan metabolic process IEP Neighborhood
BP GO:0006569 tryptophan catabolic process IEP Neighborhood
BP GO:0006576 cellular biogenic amine metabolic process IEP Neighborhood
BP GO:0006586 indolalkylamine metabolic process IEP Neighborhood
BP GO:0006873 cellular ion homeostasis IEP Neighborhood
BP GO:0006874 cellular calcium ion homeostasis IEP Neighborhood
BP GO:0006875 cellular metal ion homeostasis IEP Neighborhood
BP GO:0006950 response to stress IEP Neighborhood
BP GO:0006995 cellular response to nitrogen starvation IEP Neighborhood
BP GO:0008219 cell death IEP Neighborhood
BP GO:0009063 cellular amino acid catabolic process IEP Neighborhood
BP GO:0009074 aromatic amino acid family catabolic process IEP Neighborhood
BP GO:0009240 isopentenyl diphosphate biosynthetic process IEP Neighborhood
BP GO:0009308 amine metabolic process IEP Neighborhood
BP GO:0009310 amine catabolic process IEP Neighborhood
BP GO:0009314 response to radiation IEP Neighborhood
BP GO:0009416 response to light stimulus IEP Neighborhood
BP GO:0009628 response to abiotic stimulus IEP Neighborhood
BP GO:0009683 indoleacetic acid metabolic process IEP Neighborhood
BP GO:0009684 indoleacetic acid biosynthetic process IEP Neighborhood
BP GO:0009850 auxin metabolic process IEP Neighborhood
BP GO:0009851 auxin biosynthetic process IEP Neighborhood
BP GO:0010286 heat acclimation IEP Neighborhood
MF GO:0015267 channel activity IEP Neighborhood
MF GO:0015276 ligand-gated ion channel activity IEP Neighborhood
MF GO:0016209 antioxidant activity IEP Neighborhood
MF GO:0016491 oxidoreductase activity IEP Neighborhood
MF GO:0016614 oxidoreductase activity, acting on CH-OH group of donors IEP Neighborhood
MF GO:0016616 oxidoreductase activity, acting on the CH-OH group of donors, NAD or NADP as acceptor IEP Neighborhood
MF GO:0016651 oxidoreductase activity, acting on NAD(P)H IEP Neighborhood
MF GO:0016657 oxidoreductase activity, acting on NAD(P)H, nitrogenous group as acceptor IEP Neighborhood
MF GO:0016684 oxidoreductase activity, acting on peroxide as acceptor IEP Neighborhood
BP GO:0019288 isopentenyl diphosphate biosynthetic process, methylerythritol 4-phosphate pathway IEP Neighborhood
BP GO:0019725 cellular homeostasis IEP Neighborhood
MF GO:0022803 passive transmembrane transporter activity IEP Neighborhood
MF GO:0022834 ligand-gated channel activity IEP Neighborhood
MF GO:0022836 gated channel activity IEP Neighborhood
MF GO:0022838 substrate-specific channel activity IEP Neighborhood
MF GO:0022839 ion gated channel activity IEP Neighborhood
BP GO:0030003 cellular cation homeostasis IEP Neighborhood
BP GO:0031349 positive regulation of defense response IEP Neighborhood
BP GO:0032879 regulation of localization IEP Neighborhood
BP GO:0034754 cellular hormone metabolic process IEP Neighborhood
BP GO:0035821 modification of morphology or physiology of other organism IEP Neighborhood
BP GO:0042402 cellular biogenic amine catabolic process IEP Neighborhood
BP GO:0042430 indole-containing compound metabolic process IEP Neighborhood
BP GO:0042435 indole-containing compound biosynthetic process IEP Neighborhood
BP GO:0042436 indole-containing compound catabolic process IEP Neighborhood
CC GO:0042579 microbody IEP Neighborhood
BP GO:0043562 cellular response to nitrogen levels IEP Neighborhood
BP GO:0044003 modification by symbiont of host morphology or physiology IEP Neighborhood
BP GO:0044106 cellular amine metabolic process IEP Neighborhood
BP GO:0044419 interspecies interaction between organisms IEP Neighborhood
BP GO:0045089 positive regulation of innate immune response IEP Neighborhood
BP GO:0046218 indolalkylamine catabolic process IEP Neighborhood
BP GO:0046292 formaldehyde metabolic process IEP Neighborhood
BP GO:0046490 isopentenyl diphosphate metabolic process IEP Neighborhood
BP GO:0048316 seed development IEP Neighborhood
BP GO:0048584 positive regulation of response to stimulus IEP Neighborhood
BP GO:0048608 reproductive structure development IEP Neighborhood
BP GO:0050778 positive regulation of immune response IEP Neighborhood
BP GO:0050801 ion homeostasis IEP Neighborhood
BP GO:0050896 response to stimulus IEP Neighborhood
BP GO:0051049 regulation of transport IEP Neighborhood
BP GO:0051701 interaction with host IEP Neighborhood
BP GO:0051817 modification of morphology or physiology of other organism involved in symbiotic interaction IEP Neighborhood
MF GO:0051903 S-(hydroxymethyl)glutathione dehydrogenase activity IEP Neighborhood
BP GO:0052031 modulation by symbiont of host defense response IEP Neighborhood
BP GO:0052033 pathogen-associated molecular pattern dependent induction by symbiont of host innate immune response IEP Neighborhood
BP GO:0052166 positive regulation by symbiont of host innate immune response IEP Neighborhood
BP GO:0052167 modulation by symbiont of host innate immune response IEP Neighborhood
BP GO:0052169 pathogen-associated molecular pattern dependent modulation by symbiont of host innate immune response IEP Neighborhood
BP GO:0052173 response to defenses of other organism involved in symbiotic interaction IEP Neighborhood
BP GO:0052200 response to host defenses IEP Neighborhood
BP GO:0052255 modulation by organism of defense response of other organism involved in symbiotic interaction IEP Neighborhood
BP GO:0052257 pathogen-associated molecular pattern dependent induction by organism of innate immune response of other organism involved in symbiotic interaction IEP Neighborhood
BP GO:0052305 positive regulation by organism of innate immune response in other organism involved in symbiotic interaction IEP Neighborhood
BP GO:0052306 modulation by organism of innate immune response in other organism involved in symbiotic interaction IEP Neighborhood
BP GO:0052308 pathogen-associated molecular pattern dependent modulation by organism of innate immune response in other organism involved in symbiotic interaction IEP Neighborhood
BP GO:0052509 positive regulation by symbiont of host defense response IEP Neighborhood
BP GO:0052510 positive regulation by organism of defense response of other organism involved in symbiotic interaction IEP Neighborhood
BP GO:0052552 modulation by organism of immune response of other organism involved in symbiotic interaction IEP Neighborhood
BP GO:0052553 modulation by symbiont of host immune response IEP Neighborhood
BP GO:0052555 positive regulation by organism of immune response of other organism involved in symbiotic interaction IEP Neighborhood
BP GO:0052556 positive regulation by symbiont of host immune response IEP Neighborhood
BP GO:0052564 response to immune response of other organism involved in symbiotic interaction IEP Neighborhood
BP GO:0052572 response to host immune response IEP Neighborhood
BP GO:0055065 metal ion homeostasis IEP Neighborhood
BP GO:0055074 calcium ion homeostasis IEP Neighborhood
BP GO:0055080 cation homeostasis IEP Neighborhood
BP GO:0055082 cellular chemical homeostasis IEP Neighborhood
BP GO:0065008 regulation of biological quality IEP Neighborhood
BP GO:0072503 cellular divalent inorganic cation homeostasis IEP Neighborhood
BP GO:0072507 divalent inorganic cation homeostasis IEP Neighborhood
BP GO:0072593 reactive oxygen species metabolic process IEP Neighborhood
BP GO:0075136 response to host IEP Neighborhood
MF GO:0080007 S-nitrosoglutathione reductase activity IEP Neighborhood
BP GO:0098771 inorganic ion homeostasis IEP Neighborhood
BP GO:1901606 alpha-amino acid catabolic process IEP Neighborhood
InterPro domains Description Start Stop
IPR001471 AP2/ERF_dom 129 171
No external refs found!