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  5. Zm00001e021729_P001

Zm00001e021729_P001


Description : no hits & (original description: none)


Gene families : OG0000004 (Archaeplastida) Phylogenetic Tree(s): No tree available for this family ,
OG_05_0000175 (LandPlants) Phylogenetic Tree(s): OG_05_0000175_tree ,
OG_06_0000116 (SeedPlants) Phylogenetic Tree(s): OG_06_0000116_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Zm00001e021729_P001
Cluster HCCA: Cluster_123

Target Alias Description ECC score Gene Family Method Actions
AMTR_s00009p00172890 evm_27.TU.AmTr_v1... Protein degradation.peptide tagging.Ubiquitin... 0.03 Archaeplastida
AMTR_s00021p00161170 evm_27.TU.AmTr_v1... Protein degradation.peptide tagging.Ubiquitin... 0.04 Archaeplastida
AT1G49200 No alias RING/U-box superfamily protein 0.04 Archaeplastida
AT1G49210 No alias RING/U-box superfamily protein 0.04 Archaeplastida
AT1G67856 No alias RING/U-box superfamily protein 0.05 Archaeplastida
AT3G61550 No alias RING/U-box superfamily protein 0.03 Archaeplastida
AT4G11360 RHA1B RING-H2 finger A1B 0.04 Archaeplastida
AT4G35480 RHA3B RING-H2 finger A3B 0.03 Archaeplastida
AT4G38140 No alias RING/U-box superfamily protein 0.04 Archaeplastida
Cre01.g051700 No alias Protein degradation.peptide tagging.Ubiquitin... 0.01 Archaeplastida
GSVIVT01000538001 No alias Protein degradation.peptide tagging.Ubiquitin... 0.02 Archaeplastida
GSVIVT01012015001 No alias Protein degradation.peptide tagging.Ubiquitin... 0.04 Archaeplastida
GSVIVT01012020001 No alias Protein degradation.peptide tagging.Ubiquitin... 0.03 Archaeplastida
GSVIVT01012022001 No alias Protein degradation.peptide tagging.Ubiquitin... 0.03 Archaeplastida
GSVIVT01013145001 No alias Protein degradation.peptide tagging.Ubiquitin... 0.06 Archaeplastida
GSVIVT01016564001 No alias Protein degradation.peptide tagging.Ubiquitin... 0.03 Archaeplastida
Gb_14775 No alias RING-H2 finger protein ATL78 OS=Arabidopsis thaliana... 0.05 Archaeplastida
Gb_15836 No alias RING-H2-class E3 ligase 0.03 Archaeplastida
Gb_23076 No alias RING-H2-class E3 ligase 0.03 Archaeplastida
LOC_Os01g53500.1 No alias RING-H2 finger protein ATL68 OS=Arabidopsis thaliana... 0.04 Archaeplastida
LOC_Os01g60730.2 No alias RING-H2 finger protein ATL72 OS=Arabidopsis thaliana... 0.02 Archaeplastida
LOC_Os02g35347.1 No alias RING-H2-class E3 ligase 0.04 Archaeplastida
LOC_Os02g35365.1 No alias RING-H2-class E3 ligase 0.04 Archaeplastida
LOC_Os02g36300.1 No alias RING-H2-class E3 ligase 0.03 Archaeplastida
LOC_Os02g37450.1 No alias no hits & (original description: none) 0.04 Archaeplastida
LOC_Os02g45710.1 No alias no hits & (original description: none) 0.05 Archaeplastida
LOC_Os02g45780.1 No alias no hits & (original description: none) 0.04 Archaeplastida
LOC_Os02g46100.1 No alias RING-H2-class E3 ligase 0.02 Archaeplastida
LOC_Os02g46340.1 No alias E3 ubiquitin-protein ligase ATL4 OS=Arabidopsis thaliana... 0.05 Archaeplastida
LOC_Os03g05570.1 No alias RING-H2-class E3 ligase 0.02 Archaeplastida
LOC_Os04g49550.1 No alias RING-H2-class E3 ligase 0.03 Archaeplastida
LOC_Os05g39260.1 No alias no hits & (original description: none) 0.03 Archaeplastida
LOC_Os05g45060.1 No alias RING-H2 finger protein ATL68 OS=Arabidopsis thaliana... 0.02 Archaeplastida
LOC_Os06g09310.1 No alias RING-H2-class E3 ligase 0.02 Archaeplastida
LOC_Os06g11450.1 No alias RING-H2-class E3 ligase 0.02 Archaeplastida
LOC_Os06g45580.1 No alias RING-H2 finger protein ATL73 OS=Arabidopsis thaliana... 0.03 Archaeplastida
LOC_Os07g34180.1 No alias no hits & (original description: none) 0.03 Archaeplastida
LOC_Os08g38460.1 No alias ubiquitin protein ligase (XERICO) 0.02 Archaeplastida
LOC_Os08g43670.1 No alias NEP1-interacting protein 2 OS=Arabidopsis thaliana... 0.02 Archaeplastida
LOC_Os09g36500.1 No alias no hits & (original description: none) 0.03 Archaeplastida
LOC_Os12g02220.1 No alias no hits & (original description: none) 0.05 Archaeplastida
LOC_Os12g24490.1 No alias RING-H2-class E3 ligase 0.02 Archaeplastida
LOC_Os12g40460.1 No alias RING-H2-class E3 ligase 0.03 Archaeplastida
MA_10436650g0010 No alias RING-H2-class E3 ligase 0.02 Archaeplastida
MA_12363g0010 No alias RING-H2-class E3 ligase 0.03 Archaeplastida
MA_214717g0010 No alias no hits & (original description: none) 0.03 Archaeplastida
MA_377006g0010 No alias no hits & (original description: none) 0.03 Archaeplastida
MA_5319g0010 No alias RING-H2-class E3 ligase 0.04 Archaeplastida
MA_6931619g0010 No alias RING-H2-class E3 ligase 0.04 Archaeplastida
Pp3c1_32230V3.1 No alias RING/U-box superfamily protein 0.02 Archaeplastida
Pp3c1_9560V3.1 No alias TOXICOS EN LEVADURA 2 0.02 Archaeplastida
Pp3c22_15440V3.1 No alias RING/U-box superfamily protein 0.02 Archaeplastida
Pp3c23_1651V3.1 No alias RING/U-box superfamily protein 0.04 Archaeplastida
Pp3c26_11650V3.1 No alias TOXICOS EN LEVADURA 2 0.02 Archaeplastida
Smo96681 No alias Protein degradation.peptide tagging.Ubiquitin... 0.07 Archaeplastida
Solyc01g006910.4.1 No alias RING-H2-class E3 ligase 0.03 Archaeplastida
Solyc01g109200.4.1 No alias RING-H2-class E3 ligase 0.04 Archaeplastida
Solyc06g053640.1.1 No alias RING-H2-class E3 ligase 0.03 Archaeplastida
Solyc08g076830.1.1 No alias RING-H2-class E3 ligase 0.03 Archaeplastida
Solyc09g075320.1.1 No alias RING-H2-class E3 ligase 0.07 Archaeplastida
Solyc09g089890.1.1 No alias RING-H2-class E3 ligase 0.03 Archaeplastida
Solyc11g005280.1.1 No alias RING-H2-class E3 ligase 0.04 Archaeplastida
Solyc11g066510.3.1 No alias RING-H2-class E3 ligase 0.06 Archaeplastida
Solyc12g005020.2.1 No alias RING-H2-class E3 ligase 0.05 Archaeplastida
Zm00001e009017_P001 No alias no hits & (original description: none) 0.04 Archaeplastida
Zm00001e010787_P001 No alias RING-H2 finger protein ATL3 OS=Arabidopsis thaliana... 0.03 Archaeplastida
Zm00001e011306_P001 No alias RING-H2-class E3 ligase 0.03 Archaeplastida
Zm00001e014764_P001 No alias RING-H2 finger protein ATL72 OS=Arabidopsis thaliana... 0.05 Archaeplastida
Zm00001e015259_P001 No alias no hits & (original description: none) 0.03 Archaeplastida
Zm00001e015470_P001 No alias RING-H2-class E3 ligase 0.03 Archaeplastida
Zm00001e015905_P001 No alias RING-H2-class E3 ligase 0.05 Archaeplastida
Zm00001e017509_P001 No alias no hits & (original description: none) 0.04 Archaeplastida
Zm00001e018028_P001 No alias RING-H2-class E3 ligase 0.03 Archaeplastida
Zm00001e029032_P001 No alias RING-H2-class E3 ligase 0.04 Archaeplastida
Zm00001e030877_P001 No alias RING-H2-class E3 ligase 0.04 Archaeplastida
Zm00001e032186_P001 No alias no hits & (original description: none) 0.06 Archaeplastida
Zm00001e041824_P001 No alias RING-H2-class E3 ligase 0.02 Archaeplastida

Type GO Term Name Evidence Source

No GO annotation available for this sequence
Toggle parental
Type GO Term Name Evidence Source
MF GO:0003700 DNA-binding transcription factor activity IEP Neighborhood
MF GO:0004650 polygalacturonase activity IEP Neighborhood
BP GO:0006355 regulation of transcription, DNA-templated IEP Neighborhood
BP GO:0009889 regulation of biosynthetic process IEP Neighborhood
BP GO:0010468 regulation of gene expression IEP Neighborhood
BP GO:0010556 regulation of macromolecule biosynthetic process IEP Neighborhood
BP GO:0019219 regulation of nucleobase-containing compound metabolic process IEP Neighborhood
BP GO:0019222 regulation of metabolic process IEP Neighborhood
BP GO:0031323 regulation of cellular metabolic process IEP Neighborhood
BP GO:0031326 regulation of cellular biosynthetic process IEP Neighborhood
BP GO:0051171 regulation of nitrogen compound metabolic process IEP Neighborhood
BP GO:0051252 regulation of RNA metabolic process IEP Neighborhood
BP GO:0060255 regulation of macromolecule metabolic process IEP Neighborhood
BP GO:0080090 regulation of primary metabolic process IEP Neighborhood
MF GO:0140110 transcription regulator activity IEP Neighborhood
BP GO:1903506 regulation of nucleic acid-templated transcription IEP Neighborhood
BP GO:2000112 regulation of cellular macromolecule biosynthetic process IEP Neighborhood
BP GO:2001141 regulation of RNA biosynthetic process IEP Neighborhood
InterPro domains Description Start Stop
IPR001841 Znf_RING 117 160
No external refs found!