1. Home
  2. Species
  3. Arabidopsis thaliana
  4. Sequence
  5. AT3G26810

AT3G26810 (AFB2)


Aliases : AFB2

Description : auxin signaling F-box 2


Gene families : OG0000271 (Archaeplastida) Phylogenetic Tree(s): OG0000271_tree ,
OG_05_0000806 (LandPlants) Phylogenetic Tree(s): OG_05_0000806_tree ,
OG_06_0000796 (SeedPlants) Phylogenetic Tree(s): OG_06_0000796_tree

Sequence : coding (download), protein (download)


Download

Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: AT3G26810
Cluster HCCA: Cluster_254

Target Alias Description ECC score Gene Family Method Actions
GSVIVT01000962001 No alias Protein AUXIN SIGNALING F-BOX 2 OS=Arabidopsis thaliana 0.03 Archaeplastida
GSVIVT01023363001 No alias Protein TRANSPORT INHIBITOR RESPONSE 1 OS=Arabidopsis thaliana 0.03 Archaeplastida
LOC_Os05g37690.1 No alias component COI of jasmonic acid receptor complex 0.04 Archaeplastida
MA_263909g0010 No alias Coronatine-insensitive protein homolog 1b OS=Oryza... 0.05 Archaeplastida
MA_47869g0020 No alias F-box protein FBX14 OS=Arabidopsis thaliana... 0.03 Archaeplastida
MA_646265g0010 No alias Coronatine-insensitive protein homolog 1a OS=Oryza... 0.03 Archaeplastida
MA_78902g0010 No alias component TIR1/AFB of auxin receptor complex 0.04 Archaeplastida
MA_92309g0010 No alias component TIR1/AFB of auxin receptor complex. component... 0.03 Archaeplastida
Mp6g02750.1 No alias component TIR1/AFB of auxin receptor complex. component... 0.03 Archaeplastida
Pp3c22_6020V3.1 No alias RNI-like superfamily protein 0.02 Archaeplastida
Pp3c23_11300V3.1 No alias auxin signaling F-box 3 0.03 Archaeplastida
Solyc06g008810.3.1 No alias Protein TRANSPORT INHIBITOR RESPONSE 1 OS=Arabidopsis... 0.03 Archaeplastida
Zm00001e000649_P001 No alias component TIR1/AFB of auxin receptor complex. component... 0.03 Archaeplastida
Zm00001e001167_P003 No alias component COI of jasmonic acid receptor complex 0.06 Archaeplastida
Zm00001e026935_P001 No alias component COI of jasmonic acid receptor complex 0.03 Archaeplastida

Type GO Term Name Evidence Source
BP GO:0002237 response to molecule of bacterial origin IEP Interproscan
BP GO:0002237 response to molecule of bacterial origin RCA Interproscan
MF GO:0004842 ubiquitin-protein transferase activity ISS Interproscan
CC GO:0005634 nucleus ISM Interproscan
CC GO:0005774 vacuolar membrane IDA Interproscan
BP GO:0007165 signal transduction RCA Interproscan
MF GO:0010011 auxin binding IGI Interproscan
BP GO:0010103 stomatal complex morphogenesis RCA Interproscan
BP GO:0010152 pollen maturation IGI Interproscan
BP GO:0048443 stamen development IGI Interproscan
BP GO:0048443 stamen development RCA Interproscan
Toggle parental
Type GO Term Name Evidence Source
MF GO:0000166 nucleotide binding IEP Neighborhood
BP GO:0000271 polysaccharide biosynthetic process IEP Neighborhood
BP GO:0000902 cell morphogenesis IEP Neighborhood
MF GO:0001047 core promoter binding IEP Neighborhood
MF GO:0001067 regulatory region nucleic acid binding IEP Neighborhood
BP GO:0001944 vasculature development IEP Neighborhood
MF GO:0003924 GTPase activity IEP Neighborhood
MF GO:0004470 malic enzyme activity IEP Neighborhood
MF GO:0004473 malate dehydrogenase (decarboxylating) (NADP+) activity IEP Neighborhood
MF GO:0004559 alpha-mannosidase activity IEP Neighborhood
MF GO:0004672 protein kinase activity IEP Neighborhood
MF GO:0004673 protein histidine kinase activity IEP Neighborhood
MF GO:0004674 protein serine/threonine kinase activity IEP Neighborhood
MF GO:0004723 calcium-dependent protein serine/threonine phosphatase activity IEP Neighborhood
CC GO:0005768 endosome IEP Neighborhood
CC GO:0005802 trans-Golgi network IEP Neighborhood
CC GO:0005886 plasma membrane IEP Neighborhood
BP GO:0005975 carbohydrate metabolic process IEP Neighborhood
BP GO:0005976 polysaccharide metabolic process IEP Neighborhood
BP GO:0006108 malate metabolic process IEP Neighborhood
BP GO:0006468 protein phosphorylation IEP Neighborhood
BP GO:0007010 cytoskeleton organization IEP Neighborhood
BP GO:0007166 cell surface receptor signaling pathway IEP Neighborhood
BP GO:0007167 enzyme linked receptor protein signaling pathway IEP Neighborhood
BP GO:0007169 transmembrane receptor protein tyrosine kinase signaling pathway IEP Neighborhood
BP GO:0007389 pattern specification process IEP Neighborhood
MF GO:0008144 drug binding IEP Neighborhood
MF GO:0008477 purine nucleosidase activity IEP Neighborhood
MF GO:0008930 methylthioadenosine nucleosidase activity IEP Neighborhood
BP GO:0009116 nucleoside metabolic process IEP Neighborhood
BP GO:0009411 response to UV IEP Neighborhood
CC GO:0009505 plant-type cell wall IEP Neighborhood
BP GO:0009825 multidimensional cell growth IEP Neighborhood
BP GO:0009826 unidimensional cell growth IEP Neighborhood
BP GO:0009832 plant-type cell wall biogenesis IEP Neighborhood
BP GO:0009932 cell tip growth IEP Neighborhood
BP GO:0009966 regulation of signal transduction IEP Neighborhood
BP GO:0010075 regulation of meristem growth IEP Neighborhood
BP GO:0010104 regulation of ethylene-activated signaling pathway IEP Neighborhood
BP GO:0010105 negative regulation of ethylene-activated signaling pathway IEP Neighborhood
BP GO:0010305 leaf vascular tissue pattern formation IEP Neighborhood
BP GO:0010646 regulation of cell communication IEP Neighborhood
BP GO:0010928 regulation of auxin mediated signaling pathway IEP Neighborhood
MF GO:0015923 mannosidase activity IEP Neighborhood
BP GO:0016049 cell growth IEP Neighborhood
BP GO:0016051 carbohydrate biosynthetic process IEP Neighborhood
MF GO:0016301 kinase activity IEP Neighborhood
BP GO:0016310 phosphorylation IEP Neighborhood
MF GO:0016615 malate dehydrogenase activity IEP Neighborhood
MF GO:0016652 oxidoreductase activity, acting on NAD(P)H, NAD(P) as acceptor IEP Neighborhood
MF GO:0016772 transferase activity, transferring phosphorus-containing groups IEP Neighborhood
MF GO:0016773 phosphotransferase activity, alcohol group as acceptor IEP Neighborhood
MF GO:0016775 phosphotransferase activity, nitrogenous group as acceptor IEP Neighborhood
MF GO:0016799 hydrolase activity, hydrolyzing N-glycosyl compounds IEP Neighborhood
MF GO:0017076 purine nucleotide binding IEP Neighborhood
MF GO:0019003 GDP binding IEP Neighborhood
BP GO:0019509 L-methionine salvage from methylthioadenosine IEP Neighborhood
BP GO:0023051 regulation of signaling IEP Neighborhood
CC GO:0031410 cytoplasmic vesicle IEP Neighborhood
CC GO:0031982 vesicle IEP Neighborhood
BP GO:0032535 regulation of cellular component size IEP Neighborhood
MF GO:0032553 ribonucleotide binding IEP Neighborhood
MF GO:0032555 purine ribonucleotide binding IEP Neighborhood
BP GO:0032989 cellular component morphogenesis IEP Neighborhood
MF GO:0035639 purine ribonucleoside triphosphate binding IEP Neighborhood
MF GO:0036094 small molecule binding IEP Neighborhood
BP GO:0040007 growth IEP Neighborhood
BP GO:0040008 regulation of growth IEP Neighborhood
BP GO:0042546 cell wall biogenesis IEP Neighborhood
BP GO:0043102 amino acid salvage IEP Neighborhood
MF GO:0043167 ion binding IEP Neighborhood
MF GO:0043168 anion binding IEP Neighborhood
BP GO:0043473 pigmentation IEP Neighborhood
BP GO:0043476 pigment accumulation IEP Neighborhood
BP GO:0043478 pigment accumulation in response to UV light IEP Neighborhood
BP GO:0043479 pigment accumulation in tissues in response to UV light IEP Neighborhood
BP GO:0043480 pigment accumulation in tissues IEP Neighborhood
BP GO:0043481 anthocyanin accumulation in tissues in response to UV light IEP Neighborhood
BP GO:0043648 dicarboxylic acid metabolic process IEP Neighborhood
BP GO:0044085 cellular component biogenesis IEP Neighborhood
MF GO:0044212 transcription regulatory region DNA binding IEP Neighborhood
CC GO:0044431 Golgi apparatus part IEP Neighborhood
BP GO:0045229 external encapsulating structure organization IEP Neighborhood
BP GO:0048509 regulation of meristem development IEP Neighborhood
BP GO:0048589 developmental growth IEP Neighborhood
BP GO:0048638 regulation of developmental growth IEP Neighborhood
BP GO:0048767 root hair elongation IEP Neighborhood
BP GO:0048869 cellular developmental process IEP Neighborhood
BP GO:0050793 regulation of developmental process IEP Neighborhood
MF GO:0050897 cobalt ion binding IEP Neighborhood
BP GO:0051128 regulation of cellular component organization IEP Neighborhood
BP GO:0051259 protein complex oligomerization IEP Neighborhood
BP GO:0051260 protein homooligomerization IEP Neighborhood
BP GO:0051262 protein tetramerization IEP Neighborhood
BP GO:0051289 protein homotetramerization IEP Neighborhood
MF GO:0051740 ethylene binding IEP Neighborhood
BP GO:0060560 developmental growth involved in morphogenesis IEP Neighborhood
BP GO:0060776 simple leaf morphogenesis IEP Neighborhood
BP GO:0070297 regulation of phosphorelay signal transduction system IEP Neighborhood
BP GO:0070298 negative regulation of phosphorelay signal transduction system IEP Neighborhood
MF GO:0070300 phosphatidic acid binding IEP Neighborhood
BP GO:0071265 L-methionine biosynthetic process IEP Neighborhood
BP GO:0071267 L-methionine salvage IEP Neighborhood
BP GO:0071554 cell wall organization or biogenesis IEP Neighborhood
BP GO:0071555 cell wall organization IEP Neighborhood
MF GO:0072328 alkene binding IEP Neighborhood
BP GO:0090066 regulation of anatomical structure size IEP Neighborhood
MF GO:0097367 carbohydrate derivative binding IEP Neighborhood
CC GO:0097708 intracellular vesicle IEP Neighborhood
CC GO:0098791 Golgi subcompartment IEP Neighborhood
MF GO:1901265 nucleoside phosphate binding IEP Neighborhood
BP GO:1902531 regulation of intracellular signal transduction IEP Neighborhood
BP GO:1902532 negative regulation of intracellular signal transduction IEP Neighborhood
BP GO:1905392 plant organ morphogenesis IEP Neighborhood

No InterPro domains available for this sequence

No external refs found!